Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G2115 Papaver somniferum HOM05D000003 ORTHO05D000126 4.1e-184 647.9 321 100.0
TPR.G23677 Trifolium pratense HOM05D000003 ORTHO05D000126 4.2e-11 73.2 188 29.3
THA.LOC104799464 Tarenaya hassleriana HOM05D000003 ORTHO05D000007 3.9e-09 66.6 177 26.0
CANSAT56G1051 Cannabis sativa HOM05D000003 ORTHO05D000126 1.1e-08 65.1 150 24.7
Lj2g0023122 Lotus japonicus HOM05D000003 ORTHO05D000126 1.1e-08 65.1 146 26.0
CSS0044481 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 1.9e-08 64.3 190 22.6
QL08p015746 Quercus lobata HOM05D000003 ORTHO05D000126 1.9e-08 64.3 185 26.5
Rhsim01G0112200 Rhododendron simsii HOM05D000003 ORTHO05D000126 2.5e-08 63.9 201 25.4
Lj1P98T8 Lonicera japonica HOM05D000003 ORTHO05D000126 3.3e-08 63.5 160 22.5
Rhsim02G0038900 Rhododendron simsii HOM05D000003 ORTHO05D000126 3.3e-08 63.5 201 25.4
Lj1P554T9 Lonicera japonica HOM05D000003 ORTHO05D000126 4.3e-08 63.2 172 23.3
Actinidia39249 Actinidia chinensis HOM05D000003 ORTHO05D000007 5.6e-08 62.8 100 28.0
CANSAT25G2150 Cannabis sativa HOM05D000003 ORTHO05D000126 5.6e-08 62.8 175 25.1
Rhsim04G0089300 Rhododendron simsii HOM05D000003 ORTHO05D000126 7.4e-08 62.4 153 26.8
RhsimUnG0029000 Rhododendron simsii HOM05D000003 ORTHO05D000126 7.4e-08 62.4 153 26.8
Lj2g0016089 Lotus japonicus HOM05D000003 ORTHO05D000126 1.3e-07 61.6 151 25.2
Lj2C325T18 Lonicera japonica HOM05D000003 ORTHO05D000126 1.6e-07 61.2 125 24.0
Lj4g0025238 Lotus japonicus HOM05D000003 ORTHO05D000126 1.6e-07 61.2 181 23.2
Lj6P424T4 Lonicera japonica HOM05D000003 ORTHO05D000126 2.8e-07 60.5 163 23.3
CSS0020689 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 3.7e-07 60.1 195 24.6
Eucgr.J01056 Eucalyptus grandis HOM05D000003 ORTHO05D000126 3.7e-07 60.1 194 24.7
Haze_09938 Corylus avellana HOM05D000003 ORTHO05D000126 4.8e-07 59.7 187 24.6
Lj6P432T2 Lonicera japonica HOM05D000003 ORTHO05D000126 6.2e-07 59.3 165 23.0
Lj5P457T10 Lonicera japonica HOM05D000003 ORTHO05D000126 8.1e-07 58.9 142 24.6
Atru.chr13.1579 Acer truncatum HOM05D000003 ORTHO05D000126 1.1e-06 58.5 193 27.5
CSS0003648 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 1.8e-06 57.8 195 24.1
CSS0049896 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000126 1.8e-06 57.8 147 25.2
AUR62034069 Chenopodium quinoa HOM05D007611 ORTHO05D006795 2.4e-06 57.4 208 27.9
Rhsim09G0106200 Rhododendron simsii HOM05D000003 ORTHO05D000126 4.0e-06 56.6 187 24.1
Actinidia14966 Actinidia chinensis HOM05D000003 ORTHO05D000007 5.3e-06 56.2 75 33.3
Rhsim06G0052000 Rhododendron simsii HOM05D000003 ORTHO05D000126 5.3e-06 56.2 177 24.3
Rhsim11G0149500 Rhododendron simsii HOM05D000003 ORTHO05D000006 5.3e-06 56.2 187 25.7
COL.COLO4_26026 Corchorus olitorius HOM05D000003 ORTHO05D000126 9.0e-06 55.5 189 26.5


User provided reference genes

Program Settings