Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G2071 Papaver somniferum HOM05D003880 ORTHO05D004959 0.0e+00 1144.8 573 100.0
PSO063G4997 Papaver somniferum HOM05D003880 ORTHO05D004959 0.0e+00 1115.9 573 98.1
TAR628G0517 Trochodendron aralioides HOM05D003880 ORTHO05D004959 3.2e-224 781.9 592 69.8
Nn5g27605 Nelumbo nucifera HOM05D003880 ORTHO05D004959 2.6e-221 772.3 612 67.8
Aqoxy4G01178 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 1.0e-214 750.4 605 67.4
ClCG08G000380 Citrullus lanatus HOM05D003880 ORTHO05D004959 1.5e-213 746.5 610 66.6
MELO3C022212.2 Cucumis melo HOM05D003880 ORTHO05D004959 2.9e-212 742.3 607 66.6
TWI14G0176 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 1.4e-211 740.0 601 67.9
Dinv02585 Davidia involucrata HOM05D003880 ORTHO05D004959 9.2e-211 737.3 616 64.4
Prupe.1G551200 Prunus persica HOM05D003880 ORTHO05D004959 1.6e-210 736.5 598 67.1
CsaV3_5G040400 Cucumis sativus L. HOM05D003880 ORTHO05D004959 1.3e-209 733.4 606 66.5
Cfa008134 Carpinus fangiana HOM05D003880 ORTHO05D004959 1.9e-208 729.6 558 68.8
CiPaw.03G019400 Carya illinoinensis HOM05D003880 ORTHO05D004959 3.3e-208 728.8 536 71.3
TWI59G0907 Tripterygium wilfordii HOM05D003880 ORTHO05D004959 9.5e-208 727.2 600 66.8
Thecc.08G186500 Theobroma cacao HOM05D003880 ORTHO05D004959 1.4e-206 723.4 577 66.6
GSVIVG01012776001 Vitis vinifera HOM05D003880 ORTHO05D004959 1.4e-206 723.4 537 70.8
Actinidia23014 Actinidia chinensis HOM05D003880 ORTHO05D004959 1.5e-205 719.9 504 72.6
MD05G1093300 Malus domestica HOM05D003880 ORTHO05D004959 5.8e-205 718.0 598 65.1
Gorai.006G130000 Gossypium raimondii HOM05D003880 ORTHO05D004959 9.8e-205 717.2 576 65.5
Dinv41735 Davidia involucrata HOM05D003880 ORTHO05D004959 1.3e-204 716.8 557 67.9
Lj4A481T13 Lonicera japonica HOM05D003880 ORTHO05D004959 1.7e-204 716.5 510 71.8
MBI17_g21473_MAGBIO Magnolia biondii HOM05D003880 ORTHO05D004959 6.4e-204 714.5 588 65.8
QL09p004950 Quercus lobata HOM05D003880 ORTHO05D004959 5.4e-203 711.4 595 65.9
Gohir.D09G112200 Gossypium hirsutum HOM05D003880 ORTHO05D004959 9.2e-203 710.7 581 65.4
Actinidia02567 Actinidia chinensis HOM05D003880 ORTHO05D004959 2.0e-202 709.5 504 71.6
Duzib177G0936 Durio zibethinus HOM05D003880 ORTHO05D004959 1.3e-201 706.8 513 71.5
HanXRQChr09g0260531 Helianthus annuus HOM05D003880 ORTHO05D004959 5.0e-201 704.9 579 65.3
FAN18G3221 Fragaria x ananassa HOM05D003880 ORTHO05D004959 6.6e-201 704.5 626 62.0
FvH4_5g32350 Fragaria vesca HOM05D003880 ORTHO05D004959 8.6e-201 704.1 609 62.9
RcHm_v2.0_Chr7g0228851 Rosa chinensis HOM05D003880 ORTHO05D004959 1.1e-200 703.7 596 64.3
Atru.chr13.2392 Acer truncatum HOM05D003880 ORTHO05D004959 2.5e-200 702.6 580 66.6
Hma1.2p1_0004F.1_g004030 Hydrangea macrophylla HOM05D003880 ORTHO05D004959 2.5e-200 702.6 414 82.6
Cpa.g.sc66.21 Carica papaya HOM05D003880 ORTHO05D004959 3.3e-200 702.2 566 66.1
CiPaw.04G012900 Carya illinoinensis HOM05D003880 ORTHO05D004959 3.3e-200 702.2 412 82.3
FAN08G3431 Fragaria x ananassa HOM05D003880 ORTHO05D004959 3.3e-200 702.2 603 63.2
Nitab4.5_0000167g0290 Nicotiana tabacum HOM05D003880 ORTHO05D004959 4.3e-200 701.8 598 64.4
COL.COLO4_12797 Corchorus olitorius HOM05D003880 ORTHO05D004959 1.2e-199 700.3 533 68.5
Migut.C01288 Erythranthe guttata HOM05D003880 ORTHO05D004959 1.2e-199 700.3 596 64.6
FAN13G2674 Fragaria x ananassa HOM05D003880 ORTHO05D004959 3.6e-199 698.7 608 62.2
Peaxi162Scf00391g00533 Petunia axillaris HOM05D003880 ORTHO05D004959 8.1e-199 697.6 503 70.6
Ciclev10000797m.g Citrus clementina HOM05D003880 ORTHO05D004959 1.8e-198 696.4 574 65.2
FAN04G0842 Fragaria x ananassa HOM05D003880 ORTHO05D004959 2.3e-198 696.0 599 62.8
Lsat_1_v5_gn_1_10140 Lactuca sativa HOM05D003880 ORTHO05D004959 4.0e-198 695.3 621 62.8
CAN.G259.4 Capsicum annuum HOM05D003880 ORTHO05D004959 5.2e-198 694.9 589 63.8
MD10G1100400 Malus domestica HOM05D003880 ORTHO05D004959 6.8e-198 694.5 597 64.0
Aqoxy7G03411 Aquilegia oxysepala HOM05D003880 ORTHO05D004959 8.9e-198 694.1 424 79.7
Eucgr.F02584 Eucalyptus grandis HOM05D003880 ORTHO05D004959 8.9e-198 694.1 603 62.7
Lj7A289G27 Lonicera japonica HOM05D003880 ORTHO05D004959 1.2e-197 693.7 553 67.3
Duzib116G0170 Durio zibethinus HOM05D003880 ORTHO05D004959 2.6e-197 692.6 590 64.2
Lsat_1_v5_gn_4_136101 Lactuca sativa HOM05D003880 ORTHO05D004959 4.4e-197 691.8 549 67.8
Cc00_g06530 Coffea canephora HOM05D003880 ORTHO05D004959 9.9e-197 690.6 499 70.3
CANSAT11G2580 Cannabis sativa HOM05D003880 ORTHO05D004959 1.7e-196 689.9 599 63.9
Phvul.005G000500 Phaseolus vulgaris HOM05D003880 ORTHO05D004959 2.2e-196 689.5 576 64.4
Sopen11g010860 Solanum pennellii HOM05D003880 ORTHO05D004959 6.4e-196 688.0 591 63.5
arahy.Tifrunner.gnm1.ann1.9B0XDD Arachis hypogaea HOM05D003880 ORTHO05D004959 8.3e-196 687.6 468 74.1
Manes.02G194600 Manihot esculenta HOM05D003880 ORTHO05D004959 8.3e-196 687.6 606 60.7
Solyc11g020780.2 Solanum lycopersicum HOM05D003880 ORTHO05D004959 8.3e-196 687.6 592 63.5
arahy.Tifrunner.gnm1.ann1.HC95SM Arachis hypogaea HOM05D003880 ORTHO05D004959 1.4e-195 686.8 452 75.9
Manes.18G103500 Manihot esculenta HOM05D003880 ORTHO05D004959 1.4e-195 686.8 592 61.7
PGSC0003DMG400009278 Solanum tuberosum HOM05D003880 ORTHO05D004959 2.4e-195 686.0 595 64.5
Migut.N03362 Erythranthe guttata HOM05D003880 ORTHO05D004959 5.4e-195 684.9 584 62.7
Rhsim06G0088000 Rhododendron simsii HOM05D003880 ORTHO05D004959 5.4e-195 684.9 597 62.3
MSTRG.1545 Avicennia marina HOM05D003880 ORTHO05D004959 7.1e-195 684.5 594 63.3
PGR042G0805 Punica granatum HOM05D003880 ORTHO05D004959 7.1e-195 684.5 612 63.9
Potri.019G081600 Populus trichocarpa HOM05D003880 ORTHO05D004959 9.2e-195 684.1 593 63.1
vmacro12476 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 1.6e-194 683.3 535 66.9
Lalb_Chr09g0332911 Lupinus albus HOM05D003880 ORTHO05D004959 2.1e-194 682.9 459 74.3
Psat1g000520 Pisum sativum HOM05D003880 ORTHO05D004959 7.8e-194 681.0 432 78.2
Potri.013G109400 Populus trichocarpa HOM05D003880 ORTHO05D004959 3.0e-193 679.1 600 61.2
Sc23g0001360 Simmondsia chinensis HOM05D003880 ORTHO05D004959 6.6e-193 677.9 582 63.1
Migut.O00683 Erythranthe guttata HOM05D003880 ORTHO05D004959 1.1e-192 677.2 584 62.2
DCAR_001082 Daucus carota HOM05D003880 ORTHO05D004959 1.5e-192 676.8 438 75.3
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 1.5e-192 676.8 591 63.6
Glyma.04G256800 Glycine max HOM05D003880 ORTHO05D004959 5.6e-192 674.9 580 65.0
Sabra19G0093200 Salix brachista HOM05D003880 ORTHO05D004959 5.6e-192 674.9 594 62.5
Lj3g0009516 Lotus japonicus HOM05D003880 ORTHO05D004959 7.3e-192 674.5 610 62.3
VMungo1080G1836 Vigna mungo HOM05D003880 ORTHO05D004959 7.3e-192 674.5 591 63.3
Actinidia05639 Actinidia chinensis HOM05D003880 ORTHO05D004959 2.1e-191 672.9 541 66.7
Glyma.06G324700 Glycine max HOM05D003880 ORTHO05D004959 8.1e-191 671.0 577 64.3
CDE04G1100 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 3.1e-190 669.1 493 68.6
CDE04G1048 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 4.0e-190 668.7 502 68.5
SGA_v2.0_scaffold24G10581 Striga asiatica HOM05D003880 ORTHO05D004959 4.0e-190 668.7 596 62.6
Carub.0001s2216 Capsella rubella HOM05D003880 ORTHO05D004959 5.2e-190 668.3 495 69.1
Medtr3g005360 Medicago truncatula HOM05D003880 ORTHO05D004959 2.0e-189 666.4 409 79.7
Oeu025391.1 Olea europaea HOM05D003880 ORTHO05D004959 2.0e-189 666.4 464 71.3
Lalb_Chr05g0224761 Lupinus albus HOM05D003880 ORTHO05D004959 2.6e-189 666.0 419 78.5
THA.LOC104800120 Tarenaya hassleriana HOM05D003880 ORTHO05D004959 2.6e-189 666.0 513 68.0
SGA_v2.0_scaffold149G36569 Striga asiatica HOM05D003880 ORTHO05D004959 4.4e-189 665.2 587 61.3
SalBow6G5395 Salvia bowleyana HOM05D003880 ORTHO05D004959 9.9e-189 664.1 596 60.6
SalBow6G4536 Salvia bowleyana HOM05D003880 ORTHO05D004959 1.3e-188 663.7 597 60.5
CARHR064840 Cardamine hirsuta HOM05D003880 ORTHO05D004959 2.2e-188 662.9 598 61.4
SalBow7G4466 Salvia bowleyana HOM05D003880 ORTHO05D004959 2.2e-188 662.9 482 70.5
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 2.9e-188 662.5 546 65.4
ECA232G4758 Erigeron canadensis HOM05D003880 ORTHO05D004959 4.9e-188 661.8 557 65.2
Sabra13G0094300 Salix brachista HOM05D003880 ORTHO05D004959 1.1e-187 660.6 601 61.1
AUR62023520 Chenopodium quinoa HOM05D003880 ORTHO05D004959 2.4e-187 659.4 530 65.7
Ca_13965_v3 Cicer arietinum L. HOM05D003880 ORTHO05D004959 2.4e-187 659.4 410 78.8
Hund16787 Selenicereus undatus HOM05D003880 ORTHO05D004959 5.4e-187 658.3 549 65.2
BolC6t39667H Brassica oleracea HOM05D003880 ORTHO05D004959 7.1e-187 657.9 577 62.2
ATR0661G349 Amborella trichopoda HOM05D003880 ORTHO05D004959 2.1e-186 656.4 608 59.9
AL2G31670 Arabidopsis lyrata HOM05D003880 ORTHO05D004959 2.1e-186 656.4 606 60.2
BcaB03g14926 Brassica carinata HOM05D003880 ORTHO05D004959 2.1e-186 656.4 586 61.8
BcaC08g46654 Brassica carinata HOM05D003880 ORTHO05D004959 2.1e-186 656.4 577 62.2
C06p46140 Brassica napus HOM05D003880 ORTHO05D004959 4.6e-186 655.2 554 63.2
Os01g0874100 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 4.6e-186 655.2 427 76.8
Gohir.A09G115400 Gossypium hirsutum HOM05D003880 ORTHO05D004959 7.8e-186 654.4 579 62.5
A07p38210 Brassica napus HOM05D003880 ORTHO05D004959 3.0e-185 652.5 549 64.1
BraA07t31387Z Brassica rapa HOM05D003880 ORTHO05D004959 5.1e-185 651.7 549 64.1
AUR62004625 Chenopodium quinoa HOM05D003880 ORTHO05D004959 6.6e-185 651.4 580 61.0
vmacro00757 Vaccinium macrocarpon HOM05D003880 ORTHO05D004959 6.6e-185 651.4 486 67.9
Aa31LG4G10790 Aethionema arabicum HOM05D003880 ORTHO05D004959 8.7e-185 651.0 568 63.2
Sp5g27110 Schrenkiella parvula HOM05D003880 ORTHO05D004959 1.9e-184 649.8 560 63.6
TPR.G25498 Trifolium pratense HOM05D003880 ORTHO05D004959 2.5e-184 649.4 417 77.2
Thhalv10018309m.g Eutrema salsugineum HOM05D003880 ORTHO05D004959 3.3e-184 649.0 550 62.7
DCAR_011525 Daucus carota HOM05D003880 ORTHO05D004959 1.2e-183 647.1 548 61.9
BcaB05g24701 Brassica carinata HOM05D003880 ORTHO05D004959 2.1e-183 646.4 455 72.1
Os05g0430200 Oryza sativa ssp. japonica HOM05D003880 ORTHO05D004959 2.8e-183 646.0 409 79.0
unitig_747.g21476 Utricularia gibba HOM05D003880 ORTHO05D004959 4.7e-183 645.2 580 60.3
Zm00001eb146250 Zea mays HOM05D003880 ORTHO05D004959 4.7e-183 645.2 470 70.4
Carub.0002s1882 Capsella rubella HOM05D003880 ORTHO05D004959 2.4e-182 642.9 600 60.7
BcaC03g15327 Brassica carinata HOM05D003880 ORTHO05D004959 9.0e-182 641.0 542 64.2
C02p29320 Brassica napus HOM05D003880 ORTHO05D004959 9.0e-182 641.0 542 64.2
BolC2t08983H Brassica oleracea HOM05D003880 ORTHO05D004959 9.0e-182 641.0 542 64.2
A02p17640 Brassica napus HOM05D003880 ORTHO05D004959 1.7e-180 636.7 569 62.6
BraA02t06810Z Brassica rapa HOM05D003880 ORTHO05D004959 1.7e-180 636.7 569 62.6
Ah.05g178350 Amaranthus hybridus HOM05D003880 ORTHO05D004959 8.4e-180 634.4 581 60.2
Zm00001eb348750 Zea mays HOM05D003880 ORTHO05D004959 1.7e-177 626.7 407 76.4
AT1G72040 Arabidopsis thaliana HOM05D003880 ORTHO05D004959 5.1e-177 625.2 582 59.3
HanXRQChr11g0326071 Helianthus annuus HOM05D003880 ORTHO05D004959 1.9e-176 623.2 530 63.2
Sed0018926 Sechium edule HOM05D003880 ORTHO05D004959 1.6e-175 620.2 366 82.2
EL10Ac1g00108 Beta vulgaris HOM05D003880 ORTHO05D004959 1.8e-174 616.7 610 56.6
unitig_0.g2129 Utricularia gibba HOM05D003880 ORTHO05D004959 4.9e-172 608.6 535 61.7
Oeu004740.1 Olea europaea HOM05D003880 ORTHO05D004959 8.7e-169 597.8 424 71.7
Actinidia03514 Actinidia chinensis HOM05D003880 ORTHO05D004959 2.4e-163 579.7 361 77.3
CDE04G1975 Ceratophyllum demersum HOM05D003880 ORTHO05D004959 4.6e-162 575.5 404 69.8
Nitab4.5_0003010g0030 Nicotiana tabacum HOM05D003880 ORTHO05D004959 2.1e-154 550.1 587 55.7
Pp3c12_15090 Physcomitrium patens HOM05D003880 ORTHO05D004959 6.5e-148 528.5 435 62.3
SEGI_26933 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 2.2e-143 513.5 337 72.7
SHI35657 Sapria himalayana HOM05D003880 ORTHO05D004959 7.7e-141 505.0 390 64.6
Mapoly0028s0143 Marchantia polymorpha HOM05D003880 ORTHO05D004959 2.3e-137 493.4 577 49.9
TAR624G0155 Trochodendron aralioides HOM05D003880 ORTHO05D004959 2.0e-136 490.3 376 67.6
SMO228G0044 Selaginella moellendorffii HOM05D003880 ORTHO05D004959 7.0e-134 481.9 366 65.3
SEGI_09673 Sequoiadendron giganteum HOM05D003880 ORTHO05D004959 3.9e-129 466.1 305 73.1
BraA02t08014Z Brassica rapa HOM05D003880 ORTHO05D004959 3.0e-97 360.1 209 79.9
PRCOL_00007080 Prasinoderma coloniale HOM05D003880 ORTHO05D004959 1.5e-96 357.8 417 47.5
FAN04G1012 Fragaria x ananassa HOM05D003880 ORTHO05D004959 4.9e-95 352.8 383 54.8
A02p29920 Brassica napus HOM05D003880 ORTHO05D004959 1.1e-91 341.7 197 80.2
BcaNung01810 Brassica carinata HOM05D003880 ORTHO05D004959 3.1e-81 307.0 180 78.3
AagrBONN_evm.TU.Sc2ySwM_344.3442 Anthoceros agrestis HOM05D003880 ORTHO05D004959 1.6e-77 294.7 247 62.8
CSS0012164 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 2.1e-74 284.3 156 84.6
CSS0024003 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 2.1e-74 284.3 156 84.6
CSS0041582 Camellia sinensis var. sinensis HOM05D003880 ORTHO05D004959 3.6e-74 283.5 159 82.4
HPP92_019380 Vanilla planifolia HOM05D003880 ORTHO05D004959 1.2e-66 258.5 383 41.5
MCO01G353 Micromonas commoda HOM05D003880 ORTHO05D004959 1.9e-62 244.6 404 36.9
HPP92_027627 Vanilla planifolia HOM05D003880 ORTHO05D004959 5.3e-57 226.5 158 72.8
Cre02.g095350 Chlamydomonas reinhardtii HOM05D003880 ORTHO05D004959 1.0e-52 212.2 187 55.1
HPP92_019377 Vanilla planifolia HOM05D003880 ORTHO05D004959 3.4e-48 197.2 128 77.3
Pp3c15_5240 Physcomitrium patens HOM05D003880 ORTHO05D004959 1.7e-47 194.9 269 38.3
BolC5t31452H Brassica oleracea HOM05D003880 ORTHO05D004959 1.1e-38 165.6 109 71.6
BolC8t50393H Brassica oleracea HOM05D003880 ORTHO05D004959 1.4e-38 165.2 187 49.7
Pp3c4_20480 Physcomitrium patens HOM05D003880 ORTHO05D004959 1.0e-36 159.1 110 67.3
Actinidia18360 Actinidia chinensis HOM05D003880 ORTHO05D004959 3.8e-31 140.6 88 72.7
BcaB08g34411 Brassica carinata HOM05D003880 ORTHO05D004959 1.4e-30 138.7 156 50.0
Mapoly0080s0005 Marchantia polymorpha HOM05D003880 ORTHO05D004959 1.9e-30 138.3 130 47.7
C08p27770 Brassica napus HOM05D003880 ORTHO05D004959 3.6e-29 134.0 83 72.3
BcaB05g25101 Brassica carinata HOM05D003880 ORTHO05D019999 6.7e-28 129.8 128 53.1
BcaC07g39615 Brassica carinata HOM05D003880 ORTHO05D004959 2.0e-27 128.3 83 68.7
Oeu021226.1 Olea europaea HOM05D003880 ORTHO05D019999 4.3e-27 127.1 99 63.6
HPP92_027628 Vanilla planifolia HOM05D003880 ORTHO05D019999 5.1e-20 103.6 116 49.1
Oeu004742.1 Olea europaea HOM05D003880 ORTHO05D004959 9.7e-19 99.4 222 37.4
BcaB07g33153 Brassica carinata HOM05D003880 ORTHO05D019999 2.6e-16 91.3 96 51.0
PRCOL_00005076 Prasinoderma coloniale HOM05D003880 ORTHO05D333288 1.9e-14 85.1 175 33.7
BcaB02g09679 Brassica carinata HOM05D003880 ORTHO05D019999 6.1e-13 80.1 90 48.9
TAR624G1033 Trochodendron aralioides HOM05D003880 ORTHO05D415972 2.3e-12 78.2 142 40.8
CAN.G308.60 Capsicum annuum HOM05D003880 ORTHO05D000314 1.5e-11 75.5 139 36.7
Lsat_1_v5_gn_1_10160 Lactuca sativa HOM05D003880 ORTHO05D019999 2.8e-10 71.2 40 82.5
COL.COLO4_03399 Corchorus olitorius HOM05D003880 ORTHO05D019999 5.0e-07 60.5 32 81.2
Rhsim01G0139900 Rhododendron simsii HOM05D002321 ORTHO05D006445 3.2e-06 57.8 39 71.8


User provided reference genes

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