Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1947 Papaver somniferum HOM05D005829 ORTHO05D007246 7.9e-104 380.6 208 100.0
PSO478G3740 Papaver somniferum HOM05D005829 ORTHO05D007246 4.8e-101 371.3 208 97.6
Dinv36156 Davidia involucrata HOM05D005829 ORTHO05D007246 1.9e-52 209.9 215 57.7
Aqoxy3G00323 Aquilegia oxysepala HOM05D005829 ORTHO05D007246 2.0e-51 206.5 204 57.4
GSVIVG01008273001 Vitis vinifera HOM05D005829 ORTHO05D007246 6.0e-51 204.9 206 59.2
Manes.01G012500 Manihot esculenta HOM05D005829 ORTHO05D007246 1.5e-49 200.3 200 58.5
TAR629G3023 Trochodendron aralioides HOM05D005829 ORTHO05D007246 1.6e-48 196.8 201 56.2
Haze_18659 Corylus avellana HOM05D005829 ORTHO05D007246 2.1e-48 196.4 201 55.2
Cfa019789 Carpinus fangiana HOM05D005829 ORTHO05D007246 8.0e-48 194.5 204 53.4
Manes.05G145805 Manihot esculenta HOM05D005829 ORTHO05D007246 4.4e-46 188.7 211 58.8
Oeu046995.1 Olea europaea HOM05D005829 ORTHO05D007246 3.7e-45 185.7 196 52.6
CSS0021100 Camellia sinensis var. sinensis HOM05D005829 ORTHO05D007246 4.9e-45 185.3 155 62.6
Hund02393 Selenicereus undatus HOM05D005829 ORTHO05D007246 6.4e-45 184.9 203 52.2
Oeu006380.1 Olea europaea HOM05D005829 ORTHO05D007246 8.3e-45 184.5 203 51.2
QL10p025073 Quercus lobata HOM05D005829 ORTHO05D007246 1.1e-44 184.1 216 50.9
MSTRG.11323 Avicennia marina HOM05D005829 ORTHO05D007246 1.9e-44 183.3 190 54.2
CANSAT21G0600 Cannabis sativa HOM05D005829 ORTHO05D007246 5.4e-44 181.8 222 51.4
Nn1g06955 Nelumbo nucifera HOM05D005829 ORTHO05D007246 5.4e-44 181.8 186 60.8
Eucgr.K02215 Eucalyptus grandis HOM05D005829 ORTHO05D007246 7.0e-44 181.4 189 56.1
Cpa.g.sc13.3 Carica papaya HOM05D005829 ORTHO05D007246 2.7e-43 179.5 202 55.9
Cc04_g07210 Coffea canephora HOM05D005829 ORTHO05D007246 3.5e-43 179.1 192 52.6
Sc12g0006790 Simmondsia chinensis HOM05D005829 ORTHO05D007246 7.8e-43 177.9 168 57.7
HanXRQChr10g0314971 Helianthus annuus HOM05D005829 ORTHO05D007246 3.0e-42 176.0 194 52.6
MD06G1215200 Malus domestica HOM05D005829 ORTHO05D007246 3.0e-42 176.0 207 49.3
Potri.015G053800 Populus trichocarpa HOM05D005829 ORTHO05D007246 3.9e-42 175.6 221 48.9
PGR083G1885 Punica granatum HOM05D005829 ORTHO05D007246 5.1e-42 175.3 213 51.2
ClCG06G014890 Citrullus lanatus HOM05D005829 ORTHO05D007246 6.6e-42 174.9 205 54.6
Sabra15G0075500 Salix brachista HOM05D005829 ORTHO05D007246 1.1e-41 174.1 219 50.7
ATR0665G268 Amborella trichopoda HOM05D005829 ORTHO05D007246 1.5e-41 173.7 199 55.3
Lsat_1_v5_gn_8_146520 Lactuca sativa HOM05D005829 ORTHO05D007246 1.5e-41 173.7 198 49.5
Actinidia06971 Actinidia chinensis HOM05D005829 ORTHO05D007246 1.9e-41 173.3 173 63.6
MD14G1226000 Malus domestica HOM05D005829 ORTHO05D007246 1.9e-41 173.3 209 48.3
Prupe.5G220500 Prunus persica HOM05D005829 ORTHO05D007246 2.5e-41 172.9 206 49.5
FAN18G3094 Fragaria x ananassa HOM05D005829 ORTHO05D007246 3.3e-41 172.6 193 48.7
Ciclev10022208m.g Citrus clementina HOM05D005829 ORTHO05D007246 4.3e-41 172.2 196 50.0
Duzib068G0473 Durio zibethinus HOM05D005829 ORTHO05D007246 4.3e-41 172.2 207 50.2
FAN13G0492 Fragaria x ananassa HOM05D005829 ORTHO05D007246 5.6e-41 171.8 193 48.7
Thecc.03G033800 Theobroma cacao HOM05D005829 ORTHO05D007246 5.6e-41 171.8 207 49.3
ECA234G2972 Erigeron canadensis HOM05D005829 ORTHO05D007246 7.3e-41 171.4 205 49.3
FAN04G2288 Fragaria x ananassa HOM05D005829 ORTHO05D007246 7.3e-41 171.4 210 49.5
EL10Ac5g11432 Beta vulgaris HOM05D005829 ORTHO05D007246 9.5e-41 171.0 212 49.5
Migut.I00369 Erythranthe guttata HOM05D005829 ORTHO05D007246 1.2e-40 170.6 205 49.8
TWI15G0782 Tripterygium wilfordii HOM05D005829 ORTHO05D007246 1.2e-40 170.6 185 50.8
FAN08G3097 Fragaria x ananassa HOM05D005829 ORTHO05D007246 1.6e-40 170.2 193 48.2
MELO3C017300.2 Cucumis melo HOM05D005829 ORTHO05D007246 2.1e-40 169.9 215 53.5
Duzib084G1006 Durio zibethinus HOM05D005829 ORTHO05D007246 2.8e-40 169.5 198 51.0
CsaV3_1G003750 Cucumis sativus L. HOM05D005829 ORTHO05D007246 3.6e-40 169.1 211 52.1
Lalb_Chr14g0371231 Lupinus albus HOM05D005829 ORTHO05D007246 3.6e-40 169.1 203 51.2
CiPaw.15G129500 Carya illinoinensis HOM05D005829 ORTHO05D007246 4.7e-40 168.7 205 49.3
RcHm_v2.0_Chr7g0185261 Rosa chinensis HOM05D005829 ORTHO05D007246 6.2e-40 168.3 193 56.0
FvH4_5g12290 Fragaria vesca HOM05D005829 ORTHO05D007246 8.1e-40 167.9 193 50.8
FAN18G2130 Fragaria x ananassa HOM05D005829 ORTHO05D007246 8.1e-40 167.9 193 50.8
Atru.chr9.821 Acer truncatum HOM05D005829 ORTHO05D007246 1.8e-39 166.8 211 55.5
Gohir.D09G173000 Gossypium hirsutum HOM05D005829 ORTHO05D007246 1.8e-39 166.8 213 47.9
Gohir.A09G177500 Gossypium hirsutum HOM05D005829 ORTHO05D007246 3.1e-39 166.0 213 47.4
Ah.11g045030 Amaranthus hybridus HOM05D005829 ORTHO05D007246 4.0e-39 165.6 211 50.7
Gorai.006G194900 Gossypium raimondii HOM05D005829 ORTHO05D007246 4.0e-39 165.6 217 46.1
Potri.015G054100 Populus trichocarpa HOM05D005829 ORTHO05D007246 6.8e-39 164.9 97 77.3
Sed0000228 Sechium edule HOM05D005829 ORTHO05D007246 8.9e-39 164.5 167 61.7
arahy.Tifrunner.gnm1.ann1.K96EGP Arachis hypogaea HOM05D005829 ORTHO05D007246 2.0e-38 163.3 196 47.4
PGSC0003DMG400004051 Solanum tuberosum HOM05D005829 ORTHO05D007246 4.4e-38 162.2 192 46.4
Nitab4.5_0011561g0030 Nicotiana tabacum HOM05D005829 ORTHO05D007246 5.8e-38 161.8 201 46.8
CDE11G0392 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 7.5e-38 161.4 162 54.3
unitig_749.g13417 Utricularia gibba HOM05D005829 ORTHO05D007246 9.9e-38 161.0 99 74.7
CDE05G0659 Ceratophyllum demersum HOM05D005829 ORTHO05D007246 1.7e-37 160.2 162 52.5
Solyc06g069170.4 Solanum lycopersicum HOM05D005829 ORTHO05D007246 2.9e-37 159.5 192 47.4
Nitab4.5_0010801g0020 Nicotiana tabacum HOM05D005829 ORTHO05D007246 4.9e-37 158.7 201 46.3
Sopen06g026440 Solanum pennellii HOM05D005829 ORTHO05D007246 1.4e-36 157.1 194 45.4
Peaxi162Scf00013g00945 Petunia axillaris HOM05D005829 ORTHO05D007246 4.1e-36 155.6 194 49.5
DCAR_023199 Daucus carota HOM05D005829 ORTHO05D007246 3.5e-35 152.5 186 48.9
AL2G33720 Arabidopsis lyrata HOM05D005829 ORTHO05D007246 4.6e-35 152.1 215 45.1
Thhalv10019131m.g Eutrema salsugineum HOM05D005829 ORTHO05D007246 1.0e-34 151.0 222 46.8
CAN.G423.7 Capsicum annuum HOM05D005829 ORTHO05D007246 1.7e-34 150.2 195 45.1
Sp5g29090 Schrenkiella parvula HOM05D005829 ORTHO05D007246 1.7e-34 150.2 216 45.4
Rhsim13G0208500 Rhododendron simsii HOM05D005829 ORTHO05D007246 3.0e-34 149.4 237 47.3
CARHR067000 Cardamine hirsuta HOM05D005829 ORTHO05D007246 6.6e-34 148.3 221 43.9
BcaB03g15734 Brassica carinata HOM05D005829 ORTHO05D007246 8.6e-34 147.9 213 44.6
SGA_v2.0_scaffold25G10988 Striga asiatica HOM05D005829 ORTHO05D007246 1.1e-33 147.5 217 41.5
BcaC03g15467 Brassica carinata HOM05D005829 ORTHO05D007246 1.5e-33 147.1 218 44.5
C02p31470 Brassica napus HOM05D005829 ORTHO05D007246 1.5e-33 147.1 218 44.5
BolC2t09178H Brassica oleracea HOM05D005829 ORTHO05D007246 1.5e-33 147.1 218 44.5
HPP92_013263 Vanilla planifolia HOM05D005829 ORTHO05D007246 4.3e-33 145.6 215 43.3
C06p33760 Brassica napus HOM05D005829 ORTHO05D007246 9.5e-33 144.4 176 57.4
HPP92_013214 Vanilla planifolia HOM05D005829 ORTHO05D007246 9.5e-33 144.4 215 42.3
Carub.0002s2066 Capsella rubella HOM05D005829 ORTHO05D007246 1.6e-32 143.7 223 42.6
arahy.Tifrunner.gnm1.ann1.SID7TX Arachis hypogaea HOM05D005829 ORTHO05D007246 2.1e-32 143.3 226 40.3
BcaB05g24816 Brassica carinata HOM05D005829 ORTHO05D007246 2.1e-32 143.3 222 43.2
BcaB05g24818 Brassica carinata HOM05D005829 ORTHO05D007246 2.1e-32 143.3 222 43.2
THA.LOC104813901 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 2.1e-32 143.3 211 45.5
vmacro04041 Vaccinium macrocarpon HOM05D005829 ORTHO05D007246 2.1e-32 143.3 251 43.0
BraA02t06935Z Brassica rapa HOM05D005829 ORTHO05D007246 2.8e-32 142.9 218 43.6
Aa31LG4G4200 Aethionema arabicum HOM05D005829 ORTHO05D007246 4.7e-32 142.1 216 44.4
BraA07t30600Z Brassica rapa HOM05D005829 ORTHO05D007246 4.7e-32 142.1 221 47.1
BcaC08g45615 Brassica carinata HOM05D005829 ORTHO05D007246 6.2e-32 141.7 217 43.8
BolC6t38490H Brassica oleracea HOM05D005829 ORTHO05D007246 6.2e-32 141.7 214 50.9
A07p29590 Brassica napus HOM05D005829 ORTHO05D007246 1.4e-31 140.6 223 49.3
BcaC09g48855 Brassica carinata HOM05D005829 ORTHO05D007246 2.4e-31 139.8 104 66.3
C01p45190 Brassica napus HOM05D005829 ORTHO05D007246 2.4e-31 139.8 104 66.3
BolC1t04492H Brassica oleracea HOM05D005829 ORTHO05D007246 2.4e-31 139.8 104 66.3
A02p18930 Brassica napus HOM05D005829 ORTHO05D007246 8.9e-31 137.9 221 42.1
Zm00001eb216440 Zea mays HOM05D005829 ORTHO05D007246 9.9e-30 134.4 94 72.3
AT1G73885 Arabidopsis thaliana HOM05D005829 ORTHO05D007246 1.3e-29 134.0 201 42.3
Os03g0710600 Oryza sativa ssp. japonica HOM05D005829 ORTHO05D007246 1.3e-29 134.0 166 48.8
Zm00001eb054790 Zea mays HOM05D005829 ORTHO05D007246 1.1e-28 131.0 94 71.3
BcaC03g15466 Brassica carinata HOM05D005829 ORTHO05D007246 3.5e-27 125.9 204 43.1
SEGI_06072 Sequoiadendron giganteum HOM05D005829 ORTHO05D007246 6.0e-27 125.2 96 61.5
Lj2g0004175 Lotus japonicus HOM05D005829 ORTHO05D007246 7.8e-27 124.8 197 44.2
Gohir.A08G094610 Gossypium hirsutum HOM05D005829 ORTHO05D007246 1.6e-24 117.1 177 42.9
Medtr6g084620 Medicago truncatula HOM05D005829 ORTHO05D007246 1.5e-22 110.5 194 41.8
Ca_25501_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 5.8e-22 108.6 197 37.1
FAN14G0369 Fragaria x ananassa HOM05D005829 ORTHO05D007246 5.8e-22 108.6 69 69.6
AagrBONN_evm.TU.Sc2ySwM_228.2224 Anthoceros agrestis HOM05D005829 ORTHO05D007246 6.4e-21 105.1 97 54.6
TPR.G35237 Trifolium pratense HOM05D005829 ORTHO05D007246 8.4e-21 104.8 86 58.1
AagrBONN_evm.TU.Sc2ySwM_228.1174 Anthoceros agrestis HOM05D005829 ORTHO05D007246 1.1e-20 104.4 97 54.6
Ca_00264_v3 Cicer arietinum L. HOM05D005829 ORTHO05D007246 1.4e-20 104.0 195 35.9
Nn3g17806 Nelumbo nucifera HOM05D005829 ORTHO05D007246 1.4e-20 104.0 145 44.1
AUR62025855 Chenopodium quinoa HOM05D005829 ORTHO05D007246 6.2e-16 88.6 200 36.0
Mapoly0028s0124 Marchantia polymorpha HOM05D005829 ORTHO05D007246 1.4e-15 87.4 98 43.9
AUR62029856 Chenopodium quinoa HOM05D005829 ORTHO05D007246 3.1e-15 86.3 199 38.7
THA.LOC104813291 Tarenaya hassleriana HOM05D005829 ORTHO05D007246 2.6e-14 83.2 67 65.7
Pp3c4_12650 Physcomitrium patens HOM05D005829 ORTHO05D007246 4.5e-14 82.4 87 47.1
Pp3c4_12780 Physcomitrium patens HOM05D005829 ORTHO05D007246 4.5e-14 82.4 87 47.1
COL.COLO4_04672 Corchorus olitorius HOM05D005829 ORTHO05D007246 5.4e-12 75.5 142 43.0
Actinidia24460 Actinidia chinensis HOM05D005829 ORTHO05D007246 3.9e-10 69.3 44 65.9
A05p27070 Brassica napus HOM05D005829 ORTHO05D007246 1.8e-07 60.5 46 60.9
SMO241G0040 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 3.1e-07 59.7 59 47.5
SMO232G0029 Selaginella moellendorffii HOM05D005829 ORTHO05D007246 9.0e-07 58.2 53 47.2
Glyma.07G090700 Glycine max HOM05D005829 ORTHO05D007246 2.6e-06 56.6 105 34.3
CBR_g29305 Chara braunii HOM05D005829 ORTHO05D007246 4.5e-06 55.8 36 63.9
FAN22G1271 Fragaria x ananassa HOM05D038641 ORTHO05D035590 5.8e-06 55.5 66 48.5


User provided reference genes

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