Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1854 Papaver somniferum HOM05D003773 ORTHO05D004377 3.2e-72 276.2 318 100.0
PSO339G0310 Papaver somniferum HOM05D003773 ORTHO05D004377 2.2e-68 263.5 318 98.1
Ca_17973_v3 Cicer arietinum L. HOM05D003773 ORTHO05D004377 4.8e-60 235.7 313 70.0
Ciclev10015999m.g Citrus clementina HOM05D003773 ORTHO05D004377 2.4e-59 233.4 314 72.3
Glyma.08G111200 Glycine max HOM05D003773 ORTHO05D004377 4.1e-59 232.6 314 73.6
Lj4g0004931 Lotus japonicus HOM05D003773 ORTHO05D004377 9.1e-59 231.5 313 75.1
Lj4g0017678 Lotus japonicus HOM05D003773 ORTHO05D004377 2.0e-58 230.3 313 74.8
Sopen12g020600 Solanum pennellii HOM05D003773 ORTHO05D004377 2.6e-58 229.9 311 74.9
CsaV3_7G032670 Cucumis sativus L. HOM05D003773 ORTHO05D004377 3.5e-58 229.6 314 68.2
Eucgr.G02437 Eucalyptus grandis HOM05D003773 ORTHO05D004377 1.0e-57 228.0 313 90.4
Psat7g074520 Pisum sativum HOM05D003773 ORTHO05D004377 1.0e-57 228.0 313 74.1
Solyc12g040810.2 Solanum lycopersicum HOM05D003773 ORTHO05D004377 1.3e-57 227.6 311 74.6
MELO3C023397.2 Cucumis melo HOM05D003773 ORTHO05D004377 2.9e-57 226.5 314 67.5
VMungo0251G2733 Vigna mungo HOM05D003773 ORTHO05D004377 2.9e-57 226.5 313 72.5
Nn7g36520 Nelumbo nucifera HOM05D003773 ORTHO05D004377 3.8e-57 226.1 313 66.1
Solyc03g118570.4 Solanum lycopersicum HOM05D003773 ORTHO05D004377 3.8e-57 226.1 313 73.5
CiPaw.02G104400 Carya illinoinensis HOM05D003773 ORTHO05D004377 8.5e-57 224.9 313 67.4
Lalb_Chr07g0186751 Lupinus albus HOM05D003773 ORTHO05D004377 1.4e-56 224.2 313 70.9
Phvul.002G235200 Phaseolus vulgaris HOM05D003773 ORTHO05D004377 1.9e-56 223.8 313 72.8
Sopen03g037520 Solanum pennellii HOM05D003773 ORTHO05D004377 1.9e-56 223.8 313 72.8
Cfa004598 Carpinus fangiana HOM05D003773 ORTHO05D004377 2.5e-56 223.4 313 67.4
GSVIVG01019372001 Vitis vinifera HOM05D003773 ORTHO05D004377 2.5e-56 223.4 313 64.9
MSTRG.22069 Avicennia marina HOM05D003773 ORTHO05D004377 3.2e-56 223.0 313 63.9
Aqoxy5G00933 Aquilegia oxysepala HOM05D003773 ORTHO05D004377 7.2e-56 221.9 313 79.2
arahy.Tifrunner.gnm1.ann1.E2NQKT Arachis hypogaea HOM05D003773 ORTHO05D004377 7.2e-56 221.9 313 74.1
AUR62035657 Chenopodium quinoa HOM05D003773 ORTHO05D004377 7.2e-56 221.9 311 52.4
EL10Ac9g21128 Beta vulgaris HOM05D003773 ORTHO05D004377 9.4e-56 221.5 311 75.9
Migut.A01113 Erythranthe guttata HOM05D003773 ORTHO05D004377 9.4e-56 221.5 313 70.9
QL05p004180 Quercus lobata HOM05D003773 ORTHO05D004377 1.6e-55 220.7 313 73.2
TPR.G11959 Trifolium pratense HOM05D003773 ORTHO05D004377 1.6e-55 220.7 313 66.5
Eucgr.G02268 Eucalyptus grandis HOM05D003773 ORTHO05D004377 2.1e-55 220.3 324 52.8
TAR626G0538 Trochodendron aralioides HOM05D003773 ORTHO05D004377 2.1e-55 220.3 313 70.9
Manes.04G060700 Manihot esculenta HOM05D003773 ORTHO05D004377 2.7e-55 219.9 314 65.0
Nitab4.5_0007004g0040 Nicotiana tabacum HOM05D003773 ORTHO05D004377 2.7e-55 219.9 319 40.4
Cc04_g06080 Coffea canephora HOM05D003773 ORTHO05D004377 4.7e-55 219.2 313 63.9
CDE02G2566 Ceratophyllum demersum HOM05D003773 ORTHO05D004377 6.1e-55 218.8 310 90.3
GSVIVG01000415001 Vitis vinifera HOM05D003773 ORTHO05D004377 6.1e-55 218.8 313 64.5
Thhalv10021168m.g Eutrema salsugineum HOM05D003773 ORTHO05D004377 8.0e-55 218.4 311 64.3
C09p64680 Brassica napus HOM05D003773 ORTHO05D004377 1.0e-54 218.0 313 63.9
Thhalv10014116m.g Eutrema salsugineum HOM05D003773 ORTHO05D004377 1.4e-54 217.6 313 63.9
Aa31LG3G15020 Aethionema arabicum HOM05D003773 ORTHO05D004377 1.8e-54 217.2 313 63.6
BcaNung06880 Brassica carinata HOM05D003773 ORTHO05D004377 1.8e-54 217.2 313 63.3
THA.LOC104799137 Tarenaya hassleriana HOM05D003773 ORTHO05D004377 1.8e-54 217.2 314 64.3
Actinidia31174 Actinidia chinensis HOM05D003773 ORTHO05D004377 3.9e-54 216.1 313 70.9
BcaB01g05426 Brassica carinata HOM05D003773 ORTHO05D004377 5.2e-54 215.7 313 63.9
Hma1.2p1_1650F.1_g295665 Hydrangea macrophylla HOM05D003773 ORTHO05D004377 5.2e-54 215.7 313 89.1
MSTRG.21385 Avicennia marina HOM05D003773 ORTHO05D004377 8.8e-54 214.9 313 63.6
AUR62017150 Chenopodium quinoa HOM05D003773 ORTHO05D004377 8.8e-54 214.9 312 52.6
Lj3C848T13 Lonicera japonica HOM05D003773 ORTHO05D004377 8.8e-54 214.9 313 39.0
CAN.G843.44 Capsicum annuum HOM05D003773 ORTHO05D004377 1.1e-53 214.5 340 52.1
Hma1.2p1_1872F.1_g306150 Hydrangea macrophylla HOM05D003773 ORTHO05D004377 1.1e-53 214.5 313 88.8
Atru.chr7.1713 Acer truncatum HOM05D003773 ORTHO05D004377 1.5e-53 214.2 313 51.4
Sp3g10300 Schrenkiella parvula HOM05D003773 ORTHO05D004377 1.5e-53 214.2 310 64.2
Hund25164 Selenicereus undatus HOM05D003773 ORTHO05D004377 2.0e-53 213.8 307 53.7
Gorai.005G208400 Gossypium raimondii HOM05D003773 ORTHO05D004377 5.7e-53 212.2 312 65.4
MBI02_g12519_MAGBIO Magnolia biondii HOM05D003773 ORTHO05D004377 5.7e-53 212.2 318 62.3
RcHm_v2.0_Chr2g0160601 Rosa chinensis HOM05D003773 ORTHO05D004377 5.7e-53 212.2 315 70.5
TAR624G0440 Trochodendron aralioides HOM05D003773 ORTHO05D004377 1.7e-52 210.7 313 88.8
Carub.0006s1071 Capsella rubella HOM05D003773 ORTHO05D004377 2.8e-52 209.9 313 62.3
FvH4_7g02690 Fragaria vesca HOM05D003773 ORTHO05D004377 2.8e-52 209.9 315 72.4
FvH4_6g43850 Fragaria vesca HOM05D003773 ORTHO05D004377 3.7e-52 209.5 315 71.4
FAN05G4396 Fragaria x ananassa HOM05D003773 ORTHO05D004377 3.7e-52 209.5 315 87.3
ECA233G0965 Erigeron canadensis HOM05D003773 ORTHO05D004377 6.3e-52 208.8 311 86.8
DCAR_023465 Daucus carota HOM05D003773 ORTHO05D004377 8.2e-52 208.4 311 39.5
Gohir.D02G186100 Gossypium hirsutum HOM05D003773 ORTHO05D004377 1.4e-51 207.6 312 64.4
BolC9t59300H Brassica oleracea HOM05D003773 ORTHO05D004377 2.4e-51 206.8 315 63.5
vmacro23351 Vaccinium macrocarpon HOM05D003773 ORTHO05D004377 2.4e-51 206.8 330 37.6
FAN14G4120 Fragaria x ananassa HOM05D003773 ORTHO05D004377 4.1e-51 206.1 315 71.1
Eucgr.K00882 Eucalyptus grandis HOM05D003773 ORTHO05D004377 9.1e-51 204.9 313 66.8
Os08g0512300 Oryza sativa ssp. japonica HOM05D003773 ORTHO05D004377 2.6e-50 203.4 314 79.0
FAN03G1906 Fragaria x ananassa HOM05D003773 ORTHO05D004377 4.5e-50 202.6 315 59.0
Zm00001eb035310 Zea mays HOM05D003773 ORTHO05D004377 4.5e-50 202.6 312 78.8
FAN10G4129 Fragaria x ananassa HOM05D003773 ORTHO05D004377 5.9e-50 202.2 315 71.1
Sc07g0000800 Simmondsia chinensis HOM05D003773 ORTHO05D004377 1.3e-49 201.1 313 62.3
FAN06G3388 Fragaria x ananassa HOM05D003773 ORTHO05D004377 1.7e-49 200.7 308 72.4
TWI39G0383 Tripterygium wilfordii HOM05D003773 ORTHO05D004377 2.2e-49 200.3 313 62.9
HPP92_004888 Vanilla planifolia HOM05D003773 ORTHO05D004377 1.5e-48 197.6 314 61.8
Duzib052G0913 Durio zibethinus HOM05D003773 ORTHO05D004377 5.5e-48 195.7 313 62.3
AagrBONN_evm.TU.Sc2ySwM_117.1003 Anthoceros agrestis HOM05D003773 ORTHO05D004377 1.2e-47 194.5 311 80.7
Sed0008204 Sechium edule HOM05D003773 ORTHO05D004377 1.2e-47 194.5 297 65.7
Peaxi162Scf00571g00532 Petunia axillaris HOM05D003773 ORTHO05D004377 1.4e-46 191.0 295 47.1
Potri.013G012500 Populus trichocarpa HOM05D003773 ORTHO05D004377 1.4e-46 191.0 313 64.2
RhsimUnG0210700 Rhododendron simsii HOM05D003773 ORTHO05D004377 1.4e-46 191.0 311 86.5
Thecc.10G119200 Theobroma cacao HOM05D003773 ORTHO05D004377 1.8e-46 190.7 312 62.5
BolC3t13141H Brassica oleracea HOM05D003773 ORTHO05D004377 6.7e-46 188.7 317 36.9
SGA_v2.0_scaffold220G42596 Striga asiatica HOM05D003773 ORTHO05D004377 1.2e-45 188.0 321 52.3
FAN09G4222 Fragaria x ananassa HOM05D003773 ORTHO05D004377 1.5e-45 187.6 350 34.9
Cfa014475 Carpinus fangiana HOM05D003773 ORTHO05D004377 3.3e-45 186.4 286 75.2
COL.COLO4_03532 Corchorus olitorius HOM05D003773 ORTHO05D004377 3.3e-45 186.4 313 36.4
Nitab4.5_0001264g0100 Nicotiana tabacum HOM05D003773 ORTHO05D004377 4.4e-45 186.0 286 50.7
BcaB01g05423 Brassica carinata HOM05D003773 ORTHO05D004377 5.7e-45 185.7 313 37.1
AT5G12210 Arabidopsis thaliana HOM05D003773 ORTHO05D004377 1.3e-44 184.5 313 59.1
Pp3c1_39910 Physcomitrium patens HOM05D003773 ORTHO05D004377 2.8e-44 183.3 314 65.0
SHI10290 Sapria himalayana HOM05D003773 ORTHO05D004377 2.8e-44 183.3 314 36.3
vmacro03401 Vaccinium macrocarpon HOM05D003773 ORTHO05D004377 8.3e-44 181.8 363 33.1
Nitab4.5_0002046g0050 Nicotiana tabacum HOM05D003773 ORTHO05D004377 1.1e-43 181.4 281 51.2
Eucgr.G01411 Eucalyptus grandis HOM05D003773 ORTHO05D004377 1.4e-43 181.0 322 35.4
MD14G1230700 Malus domestica HOM05D003773 ORTHO05D004377 1.4e-43 181.0 306 36.9
AL6G23000 Arabidopsis lyrata HOM05D003773 ORTHO05D004377 1.8e-43 180.6 313 59.4
CANSAT11G0557 Cannabis sativa HOM05D003773 ORTHO05D004377 2.4e-43 180.3 313 67.7
Cpa.g.sc50.7 Carica papaya HOM05D003773 ORTHO05D004377 5.3e-43 179.1 313 59.7
Lsat_1_v5_gn_6_29461 Lactuca sativa HOM05D003773 ORTHO05D004377 5.3e-43 179.1 311 53.4
RcHm_v2.0_Chr5g0048191 Rosa chinensis HOM05D003773 ORTHO05D004377 7.0e-43 178.7 287 74.6
Sp6g31430 Schrenkiella parvula HOM05D003773 ORTHO05D004377 7.0e-43 178.7 313 59.4
SMO340G0057 Selaginella moellendorffii HOM05D003773 ORTHO05D004377 9.1e-43 178.3 308 83.1
SEGI_14663 Sequoiadendron giganteum HOM05D003773 ORTHO05D004377 2.0e-42 177.2 313 64.2
HanXRQChr02g0051831 Helianthus annuus HOM05D003773 ORTHO05D004377 3.5e-42 176.4 285 90.2
Dinv09299 Davidia involucrata HOM05D003773 ORTHO05D004377 4.5e-42 176.0 284 66.5
Mapoly0074s0013 Marchantia polymorpha HOM05D003773 ORTHO05D004377 4.5e-42 176.0 308 66.9
Eucgr.G01407 Eucalyptus grandis HOM05D003773 ORTHO05D004377 7.7e-42 175.3 313 83.7
Ah.12g059510 Amaranthus hybridus HOM05D003773 ORTHO05D004377 1.3e-41 174.5 320 35.3
C03p06330 Brassica napus HOM05D003773 ORTHO05D004377 2.9e-41 173.3 318 35.2
PGR142G1397 Punica granatum HOM05D003773 ORTHO05D004377 2.9e-41 173.3 313 58.1
Medtr1g111160 Medicago truncatula HOM05D003773 ORTHO05D004377 6.5e-41 172.2 283 74.6
Peaxi162Scf00314g00337 Petunia axillaris HOM05D003773 ORTHO05D004377 1.5e-40 171.0 327 33.9
CSS0007239 Camellia sinensis var. sinensis HOM05D003773 ORTHO05D004377 1.9e-40 170.6 284 88.7
HanXRQChr02g0056321 Helianthus annuus HOM05D003773 ORTHO05D004377 2.5e-40 170.2 286 66.8
CSS0038312 Camellia sinensis var. sinensis HOM05D003773 ORTHO05D004377 7.2e-40 168.7 284 72.2
Haze_12989 Corylus avellana HOM05D003773 ORTHO05D004377 2.7e-39 166.8 91 82.4
ClCG02G001540 Citrullus lanatus HOM05D003773 ORTHO05D004377 3.6e-39 166.4 288 36.1
SGA_v2.0_scaffold227G43195 Striga asiatica HOM05D003773 ORTHO05D004377 3.6e-39 166.4 91 79.1
QL08p034440 Quercus lobata HOM05D003773 ORTHO05D004377 1.0e-38 164.9 91 81.3
RcHm_v2.0_Chr7g0226631 Rosa chinensis HOM05D003773 ORTHO05D004377 1.4e-38 164.5 315 62.5
Hund05549 Selenicereus undatus HOM05D003773 ORTHO05D004377 1.4e-38 164.5 302 35.4
ATR0723G050 Amborella trichopoda HOM05D003773 ORTHO05D004377 3.0e-38 163.3 91 76.9
Aqoxy7G03759 Aquilegia oxysepala HOM05D003773 ORTHO05D004377 4.0e-38 162.9 90 81.1
Glyma.05G153500 Glycine max HOM05D003773 ORTHO05D004377 5.2e-38 162.5 91 79.1
COL.COLO4_20947 Corchorus olitorius HOM05D003773 ORTHO05D004377 6.8e-38 162.2 310 32.9
CBR_g17690 Chara braunii HOM05D003773 ORTHO05D004377 8.8e-38 161.8 313 67.1
CDE05G0639 Ceratophyllum demersum HOM05D003773 ORTHO05D004377 1.2e-37 161.4 91 76.9
Prupe.3G223100 Prunus persica HOM05D003773 ORTHO05D004377 1.2e-37 161.4 91 78.0
Eucgr.G01406 Eucalyptus grandis HOM05D003773 ORTHO05D004377 1.5e-37 161.0 91 76.9
BcaB01g05420 Brassica carinata HOM05D003773 ORTHO05D004377 2.0e-37 160.6 313 34.2
RhsimUnG0179500 Rhododendron simsii HOM05D003773 ORTHO05D004377 3.4e-37 159.8 89 77.5
RhsimUnG0179700 Rhododendron simsii HOM05D003773 ORTHO05D004377 3.4e-37 159.8 89 77.5
CARHR200910 Cardamine hirsuta HOM05D003773 ORTHO05D004377 4.4e-37 159.5 90 75.6
ClCG09G002660 Citrullus lanatus HOM05D003773 ORTHO05D004377 5.7e-37 159.1 410 29.8
Gohir.A03G162800 Gossypium hirsutum HOM05D003773 ORTHO05D004377 2.2e-36 157.1 91 73.6
MBI02_g15890_MAGBIO Magnolia biondii HOM05D003773 ORTHO05D004377 1.1e-35 154.8 317 33.1
Sabra13G0011200 Salix brachista HOM05D003773 ORTHO05D004377 2.4e-35 153.7 108 64.8
A10p25590 Brassica napus HOM05D003773 ORTHO05D004377 5.4e-35 152.5 92 75.0
BraA10t44626Z Brassica rapa HOM05D003773 ORTHO05D004377 5.4e-35 152.5 92 75.0
SalBow3G2878 Salvia bowleyana HOM05D006351 ORTHO05D007796 2.9e-33 146.7 311 44.7
AT3G12070 Arabidopsis thaliana HOM05D003773 ORTHO05D004377 1.1e-32 144.8 90 72.2
FAN01G0361 Fragaria x ananassa HOM05D009091 ORTHO05D004377 1.5e-32 144.4 91 71.4
MD06G1221400 Malus domestica HOM05D003773 ORTHO05D004377 2.1e-31 140.6 289 50.2
MD09G1102700 Malus domestica HOM05D003773 ORTHO05D004377 5.2e-30 136.0 74 79.7
Pp3c14_22730 Physcomitrium patens HOM05D003773 ORTHO05D004377 1.5e-29 134.4 312 59.6
Os11g0523500 Oryza sativa ssp. japonica HOM05D003773 ORTHO05D004377 5.7e-29 132.5 90 65.6
Prupe.5G225800 Prunus persica HOM05D003773 ORTHO05D004377 1.3e-28 131.3 91 68.1
PGSC0003DMG400005677 Solanum tuberosum HOM05D003773 ORTHO05D004377 3.1e-27 126.7 66 86.4
ECA232G0889 Erigeron canadensis HOM05D003773 ORTHO05D004377 1.6e-26 124.4 64 89.1
Nitab4.5_0010451g0020 Nicotiana tabacum HOM05D003773 ORTHO05D004377 2.0e-26 124.0 66 84.8
Nn7g37010 Nelumbo nucifera HOM05D003773 ORTHO05D004377 5.9e-26 122.5 66 84.8
unitig_8.g4953 Utricularia gibba HOM05D003773 ORTHO05D004377 5.9e-26 122.5 65 83.1
A03p05440 Brassica napus HOM05D003773 ORTHO05D004377 1.7e-25 120.9 66 80.3
unitig_8.g4952 Utricularia gibba HOM05D003773 ORTHO05D004377 2.3e-25 120.6 69 75.4
QL08p034434 Quercus lobata HOM05D003773 ORTHO05D004377 3.9e-25 119.8 66 81.8
DCAR_026891 Daucus carota HOM05D003773 ORTHO05D004377 5.0e-25 119.4 63 87.3
Nn5g31474 Nelumbo nucifera HOM05D003773 ORTHO05D004377 9.5e-24 115.2 69 75.4
Atru.chr6.919 Acer truncatum HOM05D003773 ORTHO05D004377 1.8e-22 110.9 63 79.4
CsaV3_7G003910 Cucumis sativus L. HOM05D003773 ORTHO05D004377 6.8e-22 109.0 69 78.3
AL3G23680 Arabidopsis lyrata HOM05D003773 ORTHO05D004377 8.9e-22 108.6 89 59.6
CSS0029091 Camellia sinensis var. sinensis HOM05D003773 ORTHO05D004377 5.8e-21 105.9 314 27.7
Oeu015711.3 Olea europaea HOM05D003773 ORTHO05D004377 5.8e-21 105.9 54 88.9
Cre01.g053500 Chlamydomonas reinhardtii HOM05D003773 ORTHO05D004377 1.3e-20 104.8 91 52.7
Prupe.2G111600 Prunus persica HOM05D003773 ORTHO05D004377 1.7e-20 104.4 91 56.0
Pp3c2_3550 Physcomitrium patens HOM05D003773 ORTHO05D004377 1.1e-19 101.7 67 70.1
CiPaw.03G164900 Carya illinoinensis HOM05D003773 ORTHO05D004377 3.2e-19 100.1 53 84.9
PRCOL_00001116 Prasinoderma coloniale HOM05D003773 ORTHO05D004377 4.1e-19 99.8 90 51.1
MCO02G125 Micromonas commoda HOM05D003773 ORTHO05D004377 1.2e-18 98.2 84 54.8
Haze_26189 Corylus avellana HOM05D003773 ORTHO05D004377 1.0e-17 95.1 91 46.2
Os03g0193700 Oryza sativa ssp. japonica HOM05D003773 ORTHO05D004377 2.3e-17 94.0 101 45.5
Carub.0003s1141 Capsella rubella HOM05D003773 ORTHO05D004377 6.6e-17 92.4 70 62.9
SEGI_16055 Sequoiadendron giganteum HOM05D003773 ORTHO05D004377 8.0e-15 85.5 62 62.9
Cfa027002 Carpinus fangiana HOM05D003773 ORTHO05D123979 3.4e-13 80.1 94 42.6
RcHm_v2.0_Chr7g0235151 Rosa chinensis HOM05D005467 ORTHO05D006523 1.1e-11 75.1 46 69.6
AUR62041265 Chenopodium quinoa HOM05D003773 ORTHO05D004377 3.2e-11 73.6 41 75.6
Sabra13G0011000 Salix brachista HOM05D006169 ORTHO05D007698 3.5e-10 70.1 58 58.6
Lj6C712G2 Lonicera japonica HOM05D003773 ORTHO05D004377 1.3e-09 68.2 42 73.8
MELO3C018787.2 Cucumis melo HOM05D003773 ORTHO05D004377 1.1e-08 65.1 74 44.6
BcaB01g05424 Brassica carinata HOM05D000005 ORTHO05D000449 2.1e-07 60.8 28 92.9
Medtr8g085230 Medicago truncatula HOM05D003773 ORTHO05D004377 2.1e-07 60.8 35 80.0
Lj6C717T13 Lonicera japonica HOM05D003773 ORTHO05D004377 8.1e-07 58.9 29 79.3
CSS0041311 Camellia sinensis var. sinensis HOM05D003773 ORTHO05D004377 8.9e-06 55.5 32 75.0


User provided reference genes

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