Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1852 Papaver somniferum HOM05D005847 ORTHO05D007143 7.6e-312 1073.2 559 100.0
Nn8g41240 Nelumbo nucifera HOM05D005847 ORTHO05D007143 8.1e-204 714.1 534 68.2
TAR629G2252 Trochodendron aralioides HOM05D005847 ORTHO05D007143 3.8e-201 705.3 534 67.4
GSVIVG01019613001 Vitis vinifera HOM05D005847 ORTHO05D007143 1.3e-193 680.2 533 66.4
MBI12_g02092_MAGBIO Magnolia biondii HOM05D005847 ORTHO05D007143 1.6e-188 663.3 541 62.5
Lj2A159T44 Lonicera japonica HOM05D005847 ORTHO05D007143 8.2e-188 661.0 536 63.8
Prupe.5G126500 Prunus persica HOM05D005847 ORTHO05D007143 9.0e-187 657.5 532 63.7
Ciclev10019764m.g Citrus clementina HOM05D005847 ORTHO05D007143 5.8e-186 654.8 541 63.8
Atru.chr9.1922 Acer truncatum HOM05D005847 ORTHO05D007143 1.0e-185 654.1 533 64.0
Aqoxy3G00691 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 1.7e-185 653.3 547 62.7
Manes.01G053800 Manihot esculenta HOM05D005847 ORTHO05D007143 1.9e-184 649.8 539 61.4
Eucgr.E01030 Eucalyptus grandis HOM05D005847 ORTHO05D007143 4.2e-184 648.7 535 63.9
MD14G1134800 Malus domestica HOM05D005847 ORTHO05D007143 5.5e-184 648.3 533 63.0
Aqoxy5G04298 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 1.2e-183 647.1 544 62.5
MD06G1113800 Malus domestica HOM05D005847 ORTHO05D007143 1.2e-183 647.1 533 62.9
Sopen08g031110 Solanum pennellii HOM05D005847 ORTHO05D007143 6.0e-183 644.8 533 61.9
CANSAT21G1860 Cannabis sativa HOM05D005847 ORTHO05D007143 7.9e-183 644.4 535 62.4
Solyc08g082880.4 Solanum lycopersicum HOM05D005847 ORTHO05D007143 3.9e-182 642.1 533 61.7
Actinidia22190 Actinidia chinensis HOM05D005847 ORTHO05D007143 1.9e-181 639.8 534 61.8
RcHm_v2.0_Chr2g0164461 Rosa chinensis HOM05D005847 ORTHO05D007143 2.2e-180 636.3 540 61.1
Psat4g194080 Pisum sativum HOM05D005847 ORTHO05D007143 1.4e-179 633.6 531 62.7
Cfa011951 Carpinus fangiana HOM05D005847 ORTHO05D007143 3.1e-179 632.5 537 61.8
FAN13G1107 Fragaria x ananassa HOM05D005847 ORTHO05D007143 6.9e-179 631.3 539 60.3
Duzib084G0923 Durio zibethinus HOM05D005847 ORTHO05D007143 9.0e-179 630.9 539 61.6
FAN08G0147 Fragaria x ananassa HOM05D005847 ORTHO05D007143 1.2e-178 630.6 534 60.3
PGR042G1950 Punica granatum HOM05D005847 ORTHO05D007143 1.2e-178 630.6 533 62.3
QL10p008953 Quercus lobata HOM05D005847 ORTHO05D007143 1.5e-178 630.2 537 61.5
CiPaw.11G115200 Carya illinoinensis HOM05D005847 ORTHO05D007143 1.0e-177 627.5 534 61.6
Haze_09129 Corylus avellana HOM05D005847 ORTHO05D007143 1.0e-177 627.5 537 62.4
FvH4_5g11440 Fragaria vesca HOM05D005847 ORTHO05D007143 1.0e-177 627.5 539 60.3
FAN04G0204 Fragaria x ananassa HOM05D005847 ORTHO05D007143 1.7e-177 626.7 539 60.1
DCAR_006499 Daucus carota HOM05D005847 ORTHO05D007143 6.5e-177 624.8 533 60.6
Sed0023920 Sechium edule HOM05D005847 ORTHO05D007143 8.5e-177 624.4 535 60.2
FAN18G1068 Fragaria x ananassa HOM05D005847 ORTHO05D007143 1.9e-176 623.2 539 59.7
Glyma.13G191700 Glycine max HOM05D005847 ORTHO05D007143 3.2e-176 622.5 531 62.7
Gohir.A12G238500 Gossypium hirsutum HOM05D005847 ORTHO05D007143 3.2e-176 622.5 535 60.0
Gohir.D12G239600 Gossypium hirsutum HOM05D005847 ORTHO05D007143 3.2e-176 622.5 535 60.2
Thecc.03G224700 Theobroma cacao HOM05D005847 ORTHO05D007143 3.2e-176 622.5 548 60.2
CAN.G567.67 Capsicum annuum HOM05D005847 ORTHO05D007143 7.2e-176 621.3 533 60.0
Gorai.008G256700 Gossypium raimondii HOM05D005847 ORTHO05D007143 7.2e-176 621.3 535 60.0
EL10Ac5g12470 Beta vulgaris HOM05D005847 ORTHO05D007143 1.2e-175 620.5 533 58.9
Cc08_g16520 Coffea canephora HOM05D005847 ORTHO05D007143 1.6e-175 620.2 534 60.3
Ca_24013_v3 Cicer arietinum L. HOM05D005847 ORTHO05D007143 6.1e-175 618.2 530 61.9
Potri.001G086800 Populus trichocarpa HOM05D005847 ORTHO05D007143 1.0e-174 617.5 535 60.2
CsaV3_5G001820 Cucumis sativus L. HOM05D005847 ORTHO05D007143 2.3e-174 616.3 535 58.9
VMungo1127G1163 Vigna mungo HOM05D005847 ORTHO05D007143 2.3e-174 616.3 540 58.9
TWI81G0154 Tripterygium wilfordii HOM05D005847 ORTHO05D007143 3.9e-174 615.5 532 63.3
Lalb_Chr13g0298981 Lupinus albus HOM05D005847 ORTHO05D007143 5.1e-174 615.1 529 62.0
Hund18289 Selenicereus undatus HOM05D005847 ORTHO05D007143 1.5e-173 613.6 535 58.5
MELO3C005771.2 Cucumis melo HOM05D005847 ORTHO05D007143 2.5e-173 612.8 534 58.8
Sc01g0010500 Simmondsia chinensis HOM05D005847 ORTHO05D007143 9.7e-173 610.9 533 59.5
HanXRQChr13g0415001 Helianthus annuus HOM05D005847 ORTHO05D007143 1.7e-172 610.1 537 59.0
Medtr8g040700 Medicago truncatula HOM05D005847 ORTHO05D007143 1.8e-171 606.7 531 60.6
Phvul.011G200000 Phaseolus vulgaris HOM05D005847 ORTHO05D007143 1.8e-171 606.7 534 58.4
PGSC0003DMG400012250 Solanum tuberosum HOM05D005847 ORTHO05D007143 1.5e-170 603.6 547 58.1
ATR0757G021 Amborella trichopoda HOM05D005847 ORTHO05D007143 2.2e-169 599.7 527 59.2
ECA240G1801 Erigeron canadensis HOM05D005847 ORTHO05D007143 2.2e-169 599.7 548 59.9
TPR.G8535 Trifolium pratense HOM05D005847 ORTHO05D007143 2.2e-169 599.7 514 60.5
Lj1g0001744 Lotus japonicus HOM05D005847 ORTHO05D007143 1.9e-168 596.7 599 57.3
Zm00001eb021260 Zea mays HOM05D005847 ORTHO05D007143 2.5e-168 596.3 541 57.5
Os07g0297300 Oryza sativa ssp. japonica HOM05D005847 ORTHO05D007143 4.2e-168 595.5 543 56.7
ClCG01G001660 Citrullus lanatus HOM05D005847 ORTHO05D007143 4.4e-165 585.5 590 53.7
HPP92_003273 Vanilla planifolia HOM05D005847 ORTHO05D007143 1.3e-164 583.9 539 55.8
THA.LOC104809314 Tarenaya hassleriana HOM05D005847 ORTHO05D007143 6.3e-164 581.6 542 57.4
COL.COLO4_10763 Corchorus olitorius HOM05D005847 ORTHO05D007143 2.4e-163 579.7 538 58.0
Peaxi162Scf00074g00363 Petunia axillaris HOM05D005847 ORTHO05D007143 5.3e-163 578.6 536 58.0
Migut.E00656 Erythranthe guttata HOM05D005847 ORTHO05D007143 5.5e-160 568.5 543 58.4
AL2G10160 Arabidopsis lyrata HOM05D005847 ORTHO05D007143 1.6e-159 567.0 529 59.7
CSS0040838 Camellia sinensis var. sinensis HOM05D005847 ORTHO05D007143 3.6e-159 565.8 393 72.8
AT1G64600 Arabidopsis thaliana HOM05D005847 ORTHO05D007143 1.8e-158 563.5 528 60.2
Aa31LG2G1600 Aethionema arabicum HOM05D005847 ORTHO05D007143 2.3e-158 563.1 558 57.7
Sp2g00130 Schrenkiella parvula HOM05D005847 ORTHO05D007143 1.1e-155 554.3 545 57.2
BcaB07g31478 Brassica carinata HOM05D005847 ORTHO05D007143 2.4e-155 553.1 550 56.4
Sabra01G0063100 Salix brachista HOM05D005847 ORTHO05D007143 4.1e-155 552.4 534 57.3
Carub.0002s0014 Capsella rubella HOM05D005847 ORTHO05D007143 5.3e-155 552.0 546 57.7
AUR62007027 Chenopodium quinoa HOM05D005847 ORTHO05D007143 3.5e-154 549.3 527 57.5
BcaC04g22588 Brassica carinata HOM05D005847 ORTHO05D007143 7.7e-154 548.1 549 56.5
C09p17640 Brassica napus HOM05D005847 ORTHO05D007143 7.7e-154 548.1 549 56.5
BolC9t54656H Brassica oleracea HOM05D005847 ORTHO05D007143 7.7e-154 548.1 549 56.5
BraA09t37102Z Brassica rapa HOM05D005847 ORTHO05D007143 1.7e-153 547.0 549 56.3
A09p14540 Brassica napus HOM05D005847 ORTHO05D007143 8.5e-153 544.7 549 56.1
Thhalv10023366m.g Eutrema salsugineum HOM05D005847 ORTHO05D007143 5.5e-152 542.0 565 55.8
vmacro11522 Vaccinium macrocarpon HOM05D005847 ORTHO05D007143 2.4e-147 526.6 587 51.1
Nitab4.5_0002728g0010 Nicotiana tabacum HOM05D005847 ORTHO05D007143 4.1e-147 525.8 363 71.6
SGA_v2.0_scaffold159G37696 Striga asiatica HOM05D005847 ORTHO05D007143 1.6e-146 523.9 535 52.7
arahy.Tifrunner.gnm1.ann1.PR6ST2 Arachis hypogaea HOM05D005847 ORTHO05D007143 2.1e-143 513.5 489 56.6
AUR62019890 Chenopodium quinoa HOM05D005847 ORTHO05D007143 2.6e-141 506.5 412 63.3
arahy.Tifrunner.gnm1.ann1.HI9AVU Arachis hypogaea HOM05D005847 ORTHO05D007143 7.5e-141 505.0 513 54.4
unitig_21.g20386 Utricularia gibba HOM05D005847 ORTHO05D007143 6.3e-140 501.9 535 50.8
Lsat_1_v5_gn_6_83620 Lactuca sativa HOM05D005847 ORTHO05D007143 1.4e-139 500.7 358 68.2
Rhsim02G0249100 Rhododendron simsii HOM05D005847 ORTHO05D007143 1.2e-122 444.5 382 61.5
RcHm_v2.0_Chr7g0186411 Rosa chinensis HOM05D005847 ORTHO05D007143 2.3e-113 413.7 276 74.6
Mapoly0031s0174 Marchantia polymorpha HOM05D005847 ORTHO05D007143 2.2e-108 397.1 547 41.1
Oeu058016.1 Olea europaea HOM05D005847 ORTHO05D007143 4.1e-107 392.9 524 43.9
Nitab4.5_0006880g0020 Nicotiana tabacum HOM05D005847 ORTHO05D007143 1.9e-104 384.0 530 46.0
Pp3c9_6890 Physcomitrium patens HOM05D005847 ORTHO05D007143 3.2e-99 366.7 542 39.7
Ah.12g052990 Amaranthus hybridus HOM05D005847 ORTHO05D007143 7.3e-96 355.5 562 39.7
CDE04G1283 Ceratophyllum demersum HOM05D005847 ORTHO05D007143 4.8e-95 352.8 256 69.1
MSTRG.26906 Avicennia marina HOM05D005847 ORTHO05D007143 4.6e-90 336.3 256 68.0
SMO119G0297 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 6.9e-86 322.4 590 35.8
Nitab4.5_0002027g0040 Nicotiana tabacum HOM05D005847 ORTHO05D007143 9.0e-86 322.0 515 41.4
MSTRG.15574 Avicennia marina HOM05D005847 ORTHO05D007143 1.1e-72 278.5 287 50.5
Nn1g00324 Nelumbo nucifera HOM05D005847 ORTHO05D007143 4.3e-72 276.6 223 68.6
Cpa.g.sc15.20 Carica papaya HOM05D005847 ORTHO05D007143 4.0e-70 270.0 211 65.4
SMO115G0010 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 4.3e-64 250.0 257 43.6
Aqoxy5G04303 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 1.0e-60 238.8 214 61.2
AagrBONN_evm.TU.Sc2ySwM_228.3279 Anthoceros agrestis HOM05D005847 ORTHO05D007143 5.0e-60 236.5 276 46.0
RcHm_v2.0_Chr7g0186431 Rosa chinensis HOM05D005847 ORTHO05D007143 1.9e-59 234.6 265 48.3
SHI06935 Sapria himalayana HOM05D005847 ORTHO05D007143 5.3e-54 216.5 484 37.0
QL10p010267 Quercus lobata HOM05D005847 ORTHO05D007143 2.5e-51 207.6 230 50.4
CARHR046320 Cardamine hirsuta HOM05D005847 ORTHO05D007143 4.2e-51 206.8 244 52.0
SMO116G0437 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 2.1e-50 204.5 366 33.3
RcHm_v2.0_Chr7g0205571 Rosa chinensis HOM05D005847 ORTHO05D007143 1.2e-42 178.7 248 43.1
CBR_g978 Chara braunii HOM05D005847 ORTHO05D007143 9.7e-40 169.1 473 30.9
SEGI_09534 Sequoiadendron giganteum HOM05D005847 ORTHO05D007143 1.0e-36 159.1 195 47.2
RcHm_v2.0_Chr7g0205551 Rosa chinensis HOM05D005847 ORTHO05D007143 1.5e-35 155.2 258 39.5
CDE04G2319 Ceratophyllum demersum HOM05D005847 ORTHO05D007143 2.7e-34 151.0 197 46.7
MCO09G139 Micromonas commoda HOM05D005847 ORTHO05D007143 5.2e-33 146.7 521 29.2
Cpa.g.c33268 Carica papaya HOM05D005847 ORTHO05D007143 4.7e-26 123.6 170 45.3
Atru.chr1.1468 Acer truncatum HOM05D005847 ORTHO05D007143 1.5e-24 118.6 77 67.5
Cre05.g237600 Chlamydomonas reinhardtii HOM05D005847 ORTHO05D007143 7.5e-24 116.3 180 39.4
Cpa.g.sc15.22 Carica papaya HOM05D005847 ORTHO05D007143 2.2e-23 114.8 82 68.3
AUR62019891 Chenopodium quinoa HOM05D005847 ORTHO05D007143 4.5e-21 107.1 129 45.7
Os10g0520950 Oryza sativa ssp. japonica HOM05D005847 ORTHO05D007143 7.7e-21 106.3 121 46.3
QL02p028460 Quercus lobata HOM05D005847 ORTHO05D007143 1.6e-18 98.6 127 46.5
Medtr8g040720 Medicago truncatula HOM05D005847 ORTHO05D007143 9.2e-14 82.8 52 63.5
Lj3g0011757 Lotus japonicus HOM05D005847 ORTHO05D007143 1.6e-13 82.0 182 34.6
Nn1g00325 Nelumbo nucifera HOM05D005847 ORTHO05D007143 2.7e-13 81.3 146 41.1


User provided reference genes

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