Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1738 Papaver somniferum HOM05D001551 ORTHO05D005859 9.3e-158 560.1 264 100.0
PSO478G5149 Papaver somniferum HOM05D001551 ORTHO05D005859 4.6e-157 557.8 264 99.6
TAR629G2635 Trochodendron aralioides HOM05D001551 ORTHO05D005859 8.1e-138 493.8 264 84.8
Thecc.03G141800 Theobroma cacao HOM05D001551 ORTHO05D005859 4.2e-134 481.5 260 85.0
TAR371G0091 Trochodendron aralioides HOM05D001551 ORTHO05D005859 3.5e-133 478.4 264 84.5
Atru.chr6.1937 Acer truncatum HOM05D001551 ORTHO05D005859 1.0e-132 476.9 264 82.6
Aqoxy5G03068 Aquilegia oxysepala HOM05D001551 ORTHO05D005859 3.9e-132 474.9 264 82.6
Gohir.A11G038800 Gossypium hirsutum HOM05D001551 ORTHO05D005859 1.9e-131 472.6 260 83.1
GSVIVG01008663001 Vitis vinifera HOM05D001551 ORTHO05D005859 2.5e-131 472.2 268 81.0
Gohir.D11G042000 Gossypium hirsutum HOM05D001551 ORTHO05D005859 1.6e-130 469.5 260 82.3
Phvul.009G160500 Phaseolus vulgaris HOM05D001551 ORTHO05D005859 1.6e-130 469.5 264 79.2
Cpa.g.sc2215.3 Carica papaya HOM05D001551 ORTHO05D005859 2.8e-130 468.8 268 81.7
Glyma.04G202400 Glycine max HOM05D001551 ORTHO05D005859 8.2e-130 467.2 267 79.8
TWI23G1313 Tripterygium wilfordii HOM05D001551 ORTHO05D005859 8.2e-130 467.2 271 80.8
Manes.14G043800 Manihot esculenta HOM05D001551 ORTHO05D005859 1.8e-129 466.1 264 81.4
Sabra12G0080000 Salix brachista HOM05D001551 ORTHO05D005859 2.4e-129 465.7 260 82.7
Potri.012G109800 Populus trichocarpa HOM05D001551 ORTHO05D005859 3.1e-129 465.3 258 82.6
Lj1g0018460 Lotus japonicus HOM05D001551 ORTHO05D005859 6.9e-129 464.2 261 79.3
Hma1.2p1_0577F.1_g182180 Hydrangea macrophylla HOM05D001551 ORTHO05D005859 9.0e-129 463.8 256 84.0
Glyma.06G163100 Glycine max HOM05D001551 ORTHO05D005859 2.0e-128 462.6 265 79.2
Gorai.007G045200 Gossypium raimondii HOM05D001551 ORTHO05D005859 2.6e-128 462.2 261 81.6
Duzib205G1491 Durio zibethinus HOM05D001551 ORTHO05D005859 4.5e-128 461.5 260 81.9
Lj9C488G12 Lonicera japonica HOM05D001551 ORTHO05D005859 5.8e-128 461.1 266 79.7
COL.COLO4_37269 Corchorus olitorius HOM05D001551 ORTHO05D005859 7.6e-128 460.7 262 80.2
MSTRG.22814 Avicennia marina HOM05D001551 ORTHO05D005859 2.9e-127 458.8 266 80.5
Ca_10874_v3 Cicer arietinum L. HOM05D001551 ORTHO05D005859 2.9e-127 458.8 261 78.9
QL10p000300 Quercus lobata HOM05D001551 ORTHO05D005859 6.5e-127 457.6 253 82.2
Cc04_g05770 Coffea canephora HOM05D001551 ORTHO05D005859 8.4e-127 457.2 260 81.5
Gohir.A03G055800 Gossypium hirsutum HOM05D001551 ORTHO05D005859 1.4e-126 456.4 264 79.9
MD14G1145900 Malus domestica HOM05D001551 ORTHO05D005859 1.9e-126 456.1 263 79.1
Ciclev10032408m.g Citrus clementina HOM05D001551 ORTHO05D005859 2.5e-126 455.7 271 79.0
SalBow7G1162 Salvia bowleyana HOM05D001551 ORTHO05D005859 3.2e-126 455.3 262 80.5
Lalb_Chr08g0237601 Lupinus albus HOM05D001551 ORTHO05D005859 5.5e-126 454.5 265 77.0
CSS0038575 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 7.2e-126 454.1 268 79.1
Cfa018698 Carpinus fangiana HOM05D001551 ORTHO05D005859 7.2e-126 454.1 264 79.5
Cfa018920 Carpinus fangiana HOM05D001551 ORTHO05D005859 9.3e-126 453.8 264 79.5
Medtr3g098510 Medicago truncatula HOM05D001551 ORTHO05D005859 9.3e-126 453.8 260 78.1
CSS0002484 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 1.2e-125 453.4 265 79.6
arahy.Tifrunner.gnm1.ann1.D8JD58 Arachis hypogaea HOM05D001551 ORTHO05D005859 2.7e-125 452.2 264 77.3
arahy.Tifrunner.gnm1.ann1.Q2CTBB Arachis hypogaea HOM05D001551 ORTHO05D005859 2.7e-125 452.2 264 77.3
MD06G1129000 Malus domestica HOM05D001551 ORTHO05D005859 6.1e-125 451.1 263 78.3
Solyc06g068760.3 Solanum lycopersicum HOM05D001551 ORTHO05D005859 7.9e-125 450.7 259 80.3
CsaV3_1G009930 Cucumis sativus L. HOM05D001551 ORTHO05D005859 1.3e-124 449.9 267 79.0
Prupe.5G140300 Prunus persica HOM05D001551 ORTHO05D005859 1.8e-124 449.5 263 78.3
Migut.I00664 Erythranthe guttata HOM05D001551 ORTHO05D005859 2.3e-124 449.1 258 80.6
MELO3C002387.2 Cucumis melo HOM05D001551 ORTHO05D005859 3.0e-124 448.7 267 78.7
RcHm_v2.0_Chr7g0188531 Rosa chinensis HOM05D001551 ORTHO05D005859 5.1e-124 448.0 260 79.2
Rhsim12G0181300 Rhododendron simsii HOM05D001551 ORTHO05D005859 6.7e-124 447.6 269 77.7
Lsat_1_v5_gn_5_9381 Lactuca sativa HOM05D001551 ORTHO05D005859 1.9e-123 446.0 265 78.9
Sopen06g026040 Solanum pennellii HOM05D001551 ORTHO05D005859 1.9e-123 446.0 260 80.0
PGSC0003DMG400025575 Solanum tuberosum HOM05D001551 ORTHO05D005859 1.9e-123 446.0 260 80.4
Gorai.003G117100 Gossypium raimondii HOM05D001551 ORTHO05D005859 2.5e-123 445.7 263 78.7
Manes.06G127400 Manihot esculenta HOM05D001551 ORTHO05D005859 3.3e-123 445.3 264 79.9
CDE02G1325 Ceratophyllum demersum HOM05D001551 ORTHO05D005859 2.2e-122 442.6 261 77.4
HanXRQChr05g0155371 Helianthus annuus HOM05D001551 ORTHO05D005859 2.2e-122 442.6 263 78.3
A01p16340 Brassica napus HOM05D001551 ORTHO05D005859 3.7e-122 441.8 272 75.4
BraA01t01589Z Brassica rapa HOM05D001551 ORTHO05D005859 6.3e-122 441.0 272 75.4
CiPaw.12G000400 Carya illinoinensis HOM05D001551 ORTHO05D005859 6.3e-122 441.0 253 79.4
C01p20490 Brassica napus HOM05D001551 ORTHO05D005859 8.2e-122 440.7 272 75.0
CAN.G1089.16 Capsicum annuum HOM05D001551 ORTHO05D005859 8.2e-122 440.7 276 76.8
Aa31LG3G7480 Aethionema arabicum HOM05D001551 ORTHO05D005859 1.1e-121 440.3 267 76.0
BcaC09g50811 Brassica carinata HOM05D001551 ORTHO05D005859 1.1e-121 440.3 271 74.9
FAN04G0171 Fragaria x ananassa HOM05D001551 ORTHO05D005859 1.8e-121 439.5 271 77.1
Actinidia08913 Actinidia chinensis HOM05D001551 ORTHO05D005859 3.1e-121 438.7 270 76.7
BcaNung03998 Brassica carinata HOM05D001551 ORTHO05D005859 3.1e-121 438.7 272 75.0
Nitab4.5_0007345g0100 Nicotiana tabacum HOM05D001551 ORTHO05D005859 3.1e-121 438.7 260 79.2
FvH4_5g09710 Fragaria vesca HOM05D001551 ORTHO05D005859 4.1e-121 438.3 271 76.8
FAN08G3006 Fragaria x ananassa HOM05D001551 ORTHO05D005859 4.1e-121 438.3 257 79.8
Psat5g055440 Pisum sativum HOM05D001551 ORTHO05D005859 5.3e-121 438.0 261 74.3
Nitab4.5_0012775g0030 Nicotiana tabacum HOM05D001551 ORTHO05D005859 6.9e-121 437.6 261 79.3
Actinidia36846 Actinidia chinensis HOM05D001551 ORTHO05D005859 9.0e-121 437.2 268 78.0
EL10Ac5g11272 Beta vulgaris HOM05D001551 ORTHO05D005859 9.0e-121 437.2 267 75.3
FAN13G0525 Fragaria x ananassa HOM05D001551 ORTHO05D005859 1.5e-120 436.4 257 79.0
FAN18G2118 Fragaria x ananassa HOM05D001551 ORTHO05D005859 2.0e-120 436.0 271 76.4
BolC1t01980H Brassica oleracea HOM05D001551 ORTHO05D005859 2.6e-120 435.6 272 74.3
Haze_07303 Corylus avellana HOM05D006543 ORTHO05D008308 2.6e-120 435.6 257 78.2
Sc04g0000180 Simmondsia chinensis HOM05D001551 ORTHO05D005859 3.4e-120 435.3 277 73.3
PGR044G0460 Punica granatum HOM05D001551 ORTHO05D005859 7.7e-120 434.1 261 77.8
vmacro16761 Vaccinium macrocarpon HOM05D001551 ORTHO05D005859 1.0e-119 433.7 274 76.3
Sed0027340 Sechium edule HOM05D001551 ORTHO05D005859 3.8e-119 431.8 256 77.7
AT5G51020 Arabidopsis thaliana HOM05D001551 ORTHO05D005859 6.5e-119 431.0 260 75.4
THA.LOC104808046 Tarenaya hassleriana HOM05D001551 ORTHO05D005859 8.5e-119 430.6 256 77.7
AL8G25230 Arabidopsis lyrata HOM05D001551 ORTHO05D005859 1.9e-118 429.5 260 75.0
Eucgr.K02189 Eucalyptus grandis HOM05D001551 ORTHO05D005859 9.4e-118 427.2 265 74.3
Carub.0008s1102 Capsella rubella HOM05D001551 ORTHO05D005859 1.6e-117 426.4 260 75.4
Sp6g13170 Schrenkiella parvula HOM05D001551 ORTHO05D005859 2.1e-117 426.0 267 73.0
CARHR257170 Cardamine hirsuta HOM05D001551 ORTHO05D005859 3.6e-117 425.2 260 74.6
unitig_27.g25103 Utricularia gibba HOM05D001551 ORTHO05D005859 7.9e-117 424.1 266 74.1
Sp7g23070 Schrenkiella parvula HOM05D001551 ORTHO05D005859 2.3e-116 422.5 272 72.8
AUR62043378 Chenopodium quinoa HOM05D001551 ORTHO05D005859 3.0e-116 422.2 282 70.2
BraA03t10931Z Brassica rapa HOM05D001551 ORTHO05D005859 3.9e-116 421.8 266 72.6
AUR62032208 Chenopodium quinoa HOM05D001551 ORTHO05D005859 1.5e-115 419.9 280 70.7
Gohir.D03G110700 Gossypium hirsutum HOM05D001551 ORTHO05D005859 3.3e-115 418.7 235 80.9
TWI39G0428 Tripterygium wilfordii HOM05D001551 ORTHO05D005859 7.4e-115 417.5 259 76.4
Rhsim08G0198700 Rhododendron simsii HOM05D001551 ORTHO05D005859 1.7e-114 416.4 250 76.0
Hund10026 Selenicereus undatus HOM05D001551 ORTHO05D005859 1.7e-114 416.4 256 73.4
MBI07_g13940_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 2.8e-114 415.6 297 69.4
SGA_v2.0_scaffold5G02806 Striga asiatica HOM05D001551 ORTHO05D005859 6.3e-114 414.5 264 74.2
Oeu051186.2 Olea europaea HOM05D001551 ORTHO05D005859 1.4e-113 413.3 282 70.6
Sed0019000 Sechium edule HOM05D001551 ORTHO05D005859 1.3e-111 406.8 256 75.0
A03p16410 Brassica napus HOM05D001551 ORTHO05D005859 1.7e-111 406.4 291 66.3
Os11g0524300 Oryza sativa ssp. japonica HOM05D001551 ORTHO05D005859 3.8e-111 405.2 231 77.5
DCAR_025640 Daucus carota HOM05D001551 ORTHO05D005859 5.5e-110 401.4 264 71.2
Peaxi162Scf00207g00254 Petunia axillaris HOM05D001551 ORTHO05D005859 7.2e-110 401.0 261 75.9
THA.LOC104811554 Tarenaya hassleriana HOM05D001551 ORTHO05D005859 7.2e-110 401.0 241 75.1
Zm00001eb170550 Zea mays HOM05D001551 ORTHO05D005859 2.7e-109 399.1 231 77.1
vmacro19115 Vaccinium macrocarpon HOM05D001551 ORTHO05D005859 3.6e-109 398.7 250 73.2
SGA_v2.0_scaffold37G14673 Striga asiatica HOM05D001551 ORTHO05D005859 8.8e-108 394.0 219 82.6
BcaC01g06112 Brassica carinata HOM05D001551 ORTHO05D005859 1.5e-107 393.3 270 70.0
ClCG03G004050 Citrullus lanatus HOM05D001551 ORTHO05D005859 5.7e-107 391.3 243 76.1
Dinv13710 Davidia involucrata HOM05D001551 ORTHO05D005859 1.2e-104 383.6 210 82.9
Actinidia18288 Actinidia chinensis HOM05D001551 ORTHO05D005859 1.1e-102 377.1 216 78.7
Thhalv10014437m.g Eutrema salsugineum HOM05D001551 ORTHO05D005859 7.2e-102 374.4 222 77.0
Mapoly0002s0145 Marchantia polymorpha HOM05D001551 ORTHO05D005859 6.7e-100 367.9 227 71.8
AagrBONN_evm.TU.Sc2ySwM_368.1985 Anthoceros agrestis HOM05D001551 ORTHO05D005859 2.6e-99 365.9 235 67.2
Nn4g22121 Nelumbo nucifera HOM05D001551 ORTHO05D005859 1.3e-98 363.6 264 66.7
Pp3c6_23000 Physcomitrium patens HOM05D001551 ORTHO05D005859 2.4e-97 359.4 224 70.1
Pp3c5_10130 Physcomitrium patens HOM05D001551 ORTHO05D005859 4.1e-97 358.6 245 64.5
SMO118G0459 Selaginella moellendorffii HOM05D001551 ORTHO05D005859 1.7e-95 353.2 217 70.5
AUR62011939 Chenopodium quinoa HOM05D001551 ORTHO05D005859 1.5e-94 350.1 299 59.5
TPR.G16934 Trifolium pratense HOM05D001551 ORTHO05D005859 2.7e-93 345.9 193 79.8
Actinidia25511 Actinidia chinensis HOM05D001551 ORTHO05D005859 1.8e-92 343.2 250 66.4
Haze_07088 Corylus avellana HOM05D001551 ORTHO05D005859 1.2e-88 330.5 231 68.0
AUR62043863 Chenopodium quinoa HOM05D001551 ORTHO05D005859 3.5e-88 328.9 329 52.3
Hund02515 Selenicereus undatus HOM05D001551 ORTHO05D005859 3.5e-88 328.9 290 56.9
Nn3g16260 Nelumbo nucifera HOM05D001551 ORTHO05D005859 1.5e-86 323.6 162 88.3
Dinv23235 Davidia involucrata HOM05D001551 ORTHO05D005859 2.0e-83 313.2 181 80.7
CBR_g30803 Chara braunii HOM05D001551 ORTHO05D005859 4.1e-81 305.4 215 59.5
SEGI_34423 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 5.0e-79 298.5 198 66.2
Duzib084G0881 Durio zibethinus HOM05D001551 ORTHO05D005859 3.4e-75 285.8 162 80.2
Thhalv10025970m.g Eutrema salsugineum HOM05D001551 ORTHO05D005859 3.6e-69 265.8 157 78.3
MBI07_g35983_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 1.4e-68 263.8 163 77.9
MBI07_g48061_MAGBIO Magnolia biondii HOM05D001551 ORTHO05D005859 4.6e-64 248.8 139 81.3
HPP92_009738 Vanilla planifolia HOM05D001551 ORTHO05D005859 4.6e-64 248.8 198 63.6
CDE06G0746 Ceratophyllum demersum HOM05D001551 ORTHO05D005859 5.0e-63 245.4 215 59.5
Sc04g0000140 Simmondsia chinensis HOM05D001551 ORTHO05D005859 5.2e-52 208.8 122 77.9
Sc04g0000130 Simmondsia chinensis HOM05D001551 ORTHO05D005859 1.3e-50 204.1 120 76.7
CSS0038626 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 1.9e-33 147.1 105 69.5
CSS0016811 Camellia sinensis var. sinensis HOM05D001551 ORTHO05D005859 9.9e-27 124.8 82 74.4
FvH4_6g04500 Fragaria vesca HOM05D001551 ORTHO05D005859 1.3e-26 124.4 72 80.6
Psat3g122800 Pisum sativum HOM05D001551 ORTHO05D005859 1.9e-25 120.6 81 66.7
ECA246G1749 Erigeron canadensis HOM05D001551 ORTHO05D005859 7.9e-24 115.2 66 78.8
Pp3c16_270 Physcomitrium patens HOM05D001551 ORTHO05D005859 1.3e-23 114.4 65 73.8
SEGI_13041 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 6.7e-23 112.1 67 67.2
Psat7g261640 Pisum sativum HOM05D001551 ORTHO05D005859 9.0e-20 101.7 91 54.9
Cfa013473 Carpinus fangiana HOM05D001551 ORTHO05D005859 3.8e-18 96.3 71 67.6
HanXRQChr05g0130591 Helianthus annuus HOM05D001551 ORTHO05D005859 3.2e-17 93.2 52 78.8
Sabra15G0128500 Salix brachista HOM05D001551 ORTHO05D003058 3.5e-16 89.7 84 57.1
BcaC01g06064 Brassica carinata HOM05D001551 ORTHO05D005859 3.9e-15 86.3 85 52.9
Duzib084G0670 Durio zibethinus HOM05D001551 ORTHO05D005859 9.6e-14 81.6 56 71.4
C03p19300 Brassica napus HOM05D001551 ORTHO05D042173 3.4e-11 73.2 43 67.4
Ah.11g046990 Amaranthus hybridus HOM05D001551 ORTHO05D005859 5.9e-11 72.4 56 62.5
Psat5g306440 Pisum sativum HOM05D001551 ORTHO05D006558 1.3e-10 71.2 52 65.4
Ah.02g114530 Amaranthus hybridus HOM05D001551 ORTHO05D005859 3.8e-10 69.7 53 58.5
SEGI_34327 Sequoiadendron giganteum HOM05D001551 ORTHO05D005859 9.3e-09 65.1 67 47.8


User provided reference genes

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