Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1731 Papaver somniferum HOM05D002875 ORTHO05D003215 2.2e-216 755.4 379 100.0
PSO017G4267 Papaver somniferum HOM05D002875 ORTHO05D003215 4.2e-135 485.3 285 87.0
TAR374G0377 Trochodendron aralioides HOM05D002875 ORTHO05D003215 6.0e-126 454.9 375 58.9
Aqoxy5G03377 Aquilegia oxysepala HOM05D002875 ORTHO05D003215 2.1e-123 446.4 375 58.7
QL02p071336 Quercus lobata HOM05D002875 ORTHO05D003215 9.3e-119 431.0 376 55.9
Nn4g22316 Nelumbo nucifera HOM05D002875 ORTHO05D003215 8.7e-117 424.5 373 54.4
CiPaw.03G055700 Carya illinoinensis HOM05D002875 ORTHO05D003215 1.1e-116 424.1 376 55.1
CSS0013993 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 7.6e-113 411.4 371 54.2
Lju41C52G13 Lonicera japonica HOM05D002875 ORTHO05D003215 4.9e-112 408.7 381 52.5
Manes.17G103200 Manihot esculenta HOM05D002875 ORTHO05D003215 3.2e-111 406.0 374 51.6
Cfa010845 Carpinus fangiana HOM05D002875 ORTHO05D003215 4.2e-111 405.6 376 53.5
RcHm_v2.0_Chr2g0175571 Rosa chinensis HOM05D002875 ORTHO05D003215 3.0e-109 399.4 376 52.9
FvH4_6g53530 Fragaria vesca HOM05D002875 ORTHO05D003215 2.5e-108 396.4 376 51.3
FAN09G0514 Fragaria x ananassa HOM05D002875 ORTHO05D003215 2.5e-108 396.4 374 51.9
Prupe.3G306400 Prunus persica HOM05D002875 ORTHO05D003215 7.4e-108 394.8 374 51.9
Ciclev10014073m.g Citrus clementina HOM05D002875 ORTHO05D003215 6.3e-107 391.7 375 50.4
MD09G1010700 Malus domestica HOM05D002875 ORTHO05D003215 3.1e-106 389.4 374 53.2
FAN14G0620 Fragaria x ananassa HOM05D002875 ORTHO05D003215 9.0e-106 387.9 374 50.5
Gohir.A05G338300 Gossypium hirsutum HOM05D002875 ORTHO05D003215 9.0e-106 387.9 375 50.7
COL.COLO4_13262 Corchorus olitorius HOM05D002875 ORTHO05D003215 1.2e-105 387.5 376 51.6
Haze_03110 Corylus avellana HOM05D002875 ORTHO05D003215 2.6e-105 386.3 389 50.6
Gorai.012G086500 Gossypium raimondii HOM05D002875 ORTHO05D003215 4.5e-105 385.6 389 50.1
MBI07_g16947_MAGBIO Magnolia biondii HOM05D002875 ORTHO05D003215 2.2e-104 383.3 330 57.6
CSS0041826 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 3.8e-104 382.5 372 51.9
VMungo1383G3279 Vigna mungo HOM05D002875 ORTHO05D003215 6.5e-104 381.7 374 50.0
Thecc.04G036100 Theobroma cacao HOM05D002875 ORTHO05D003215 1.1e-103 380.9 375 52.0
Rhsim08G0042800 Rhododendron simsii HOM05D002875 ORTHO05D003215 2.5e-103 379.8 376 50.5
Sabra16G0211300 Salix brachista HOM05D002875 ORTHO05D003215 3.2e-103 379.4 375 49.9
CANSAT64G2306 Cannabis sativa HOM05D002875 ORTHO05D003215 4.2e-103 379.0 375 50.9
Glyma.19G091300 Glycine max HOM05D002875 ORTHO05D003215 7.9e-102 374.8 374 48.9
Phvul.001G093400 Phaseolus vulgaris HOM05D002875 ORTHO05D003215 1.0e-101 374.4 374 48.4
Actinidia04438 Actinidia chinensis HOM05D002875 ORTHO05D003215 1.4e-101 374.0 363 51.5
Potri.001G330000 Populus trichocarpa HOM05D002875 ORTHO05D003215 1.4e-101 374.0 371 49.6
Duzib187G0424 Durio zibethinus HOM05D002875 ORTHO05D003215 1.9e-100 370.2 378 52.4
Glyma.16G056400 Glycine max HOM05D002875 ORTHO05D003215 1.3e-99 367.5 374 48.4
Lalb_Chr14g0363441 Lupinus albus HOM05D002875 ORTHO05D003215 1.7e-99 367.1 375 49.3
arahy.Tifrunner.gnm1.ann1.AA3MKH Arachis hypogaea HOM05D002875 ORTHO05D003215 1.3e-96 357.5 376 48.4
THA.LOC104823982 Tarenaya hassleriana HOM05D002875 ORTHO05D003215 4.7e-94 349.0 374 47.6
DCAR_000966 Daucus carota HOM05D002875 ORTHO05D003215 2.0e-92 343.6 327 49.5
arahy.Tifrunner.gnm1.ann1.E3K3GD Arachis hypogaea HOM05D002875 ORTHO05D003215 5.9e-89 332.0 376 46.3
Atru.chr9.2501 Acer truncatum HOM05D002875 ORTHO05D003215 5.5e-71 272.3 370 40.3
Manes.06G106500 Manihot esculenta HOM05D002875 ORTHO05D003215 2.1e-70 270.4 370 40.3
Nn3g16811 Nelumbo nucifera HOM05D002875 ORTHO05D003215 1.4e-69 267.7 374 40.4
Rhsim12G0166000 Rhododendron simsii HOM05D002875 ORTHO05D003215 3.0e-69 266.5 370 38.1
MBI16_g05467_MAGBIO Magnolia biondii HOM05D002875 ORTHO05D003215 8.8e-69 265.0 362 41.7
Cfa019158 Carpinus fangiana HOM05D002875 ORTHO05D003215 1.5e-68 264.2 367 40.1
CiPaw.12G028200 Carya illinoinensis HOM05D002875 ORTHO05D003215 3.4e-68 263.1 374 39.6
CAN.G1166.11 Capsicum annuum HOM05D002875 ORTHO05D003215 9.8e-68 261.5 362 40.6
CAN.G2294.1 Capsicum annuum HOM05D002875 ORTHO05D003215 9.8e-68 261.5 362 40.6
ClCG01G013270 Citrullus lanatus HOM05D002875 ORTHO05D003215 9.8e-68 261.5 371 39.1
Nitab4.5_0003229g0110 Nicotiana tabacum HOM05D002875 ORTHO05D003215 9.8e-68 261.5 331 41.4
Cc04_g12200 Coffea canephora HOM05D002875 ORTHO05D003215 1.3e-67 261.2 369 39.0
Nitab4.5_0007371g0020 Nicotiana tabacum HOM05D002875 ORTHO05D003215 1.3e-67 261.2 331 41.4
CANSAT80G1146 Cannabis sativa HOM05D002875 ORTHO05D003215 2.8e-67 260.0 360 40.3
Aqoxy3G02874 Aquilegia oxysepala HOM05D002875 ORTHO05D003215 4.8e-67 259.2 373 39.1
SGA_v2.0_scaffold25G10830 Striga asiatica HOM05D002875 ORTHO05D003215 2.4e-66 256.9 372 39.5
Sopen03g031840 Solanum pennellii HOM05D002875 ORTHO05D003215 3.1e-66 256.5 331 41.7
PSO782G2041 Papaver somniferum HOM05D002875 ORTHO05D003215 4.1e-66 256.1 367 38.7
Phvul.009G176900 Phaseolus vulgaris HOM05D002875 ORTHO05D003215 5.4e-66 255.8 367 36.8
TAR629G1476 Trochodendron aralioides HOM05D002875 ORTHO05D003215 7.0e-66 255.4 370 38.1
PSO832G2157 Papaver somniferum HOM05D002875 ORTHO05D003215 9.1e-66 255.0 367 38.7
PGR044G0014 Punica granatum HOM05D002875 ORTHO05D003215 9.1e-66 255.0 370 38.6
SalBow5G4119 Salvia bowleyana HOM05D002875 ORTHO05D003215 9.1e-66 255.0 367 40.1
PGSC0003DMG400018158 Solanum tuberosum HOM05D002875 ORTHO05D003215 9.1e-66 255.0 331 40.8
Dinv20633 Davidia involucrata HOM05D002875 ORTHO05D003215 1.2e-65 254.6 368 37.8
CSS0012171 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 2.0e-65 253.8 370 38.6
Duzib205G0575 Durio zibethinus HOM05D002875 ORTHO05D003215 2.7e-65 253.4 367 38.1
QL10p009524 Quercus lobata HOM05D002875 ORTHO05D003215 4.5e-65 252.7 368 38.6
CSS0028386 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 5.9e-65 252.3 371 38.8
Migut.O00118 Erythranthe guttata HOM05D002875 ORTHO05D003215 5.9e-65 252.3 364 39.3
RcHm_v2.0_Chr7g0193221 Rosa chinensis HOM05D002875 ORTHO05D003215 5.9e-65 252.3 370 38.1
Thecc.03G015100 Theobroma cacao HOM05D002875 ORTHO05D003215 5.9e-65 252.3 367 38.1
FAN08G3091 Fragaria x ananassa HOM05D002875 ORTHO05D003215 7.7e-65 251.9 374 37.7
Gohir.A12G275500 Gossypium hirsutum HOM05D002875 ORTHO05D003215 7.7e-65 251.9 365 38.1
Gorai.008G296700 Gossypium raimondii HOM05D002875 ORTHO05D003215 1.3e-64 251.1 365 38.1
vmacro16624 Vaccinium macrocarpon HOM05D002875 ORTHO05D003215 1.3e-64 251.1 370 36.2
VMungo1309G1778 Vigna mungo HOM05D002875 ORTHO05D003215 1.3e-64 251.1 369 37.7
CsaV3_1G008630 Cucumis sativus L. HOM05D002875 ORTHO05D003215 1.7e-64 250.8 370 38.6
Solyc03g112760.3 Solanum lycopersicum HOM05D002875 ORTHO05D003215 1.7e-64 250.8 331 41.1
CSS0013183 Camellia sinensis var. sinensis HOM05D002875 ORTHO05D003215 2.3e-64 250.4 370 38.9
Gohir.D12G276200 Gossypium hirsutum HOM05D002875 ORTHO05D003215 2.9e-64 250.0 365 37.8
MELO3C002277.2 Cucumis melo HOM05D002875 ORTHO05D003215 3.8e-64 249.6 361 39.6
Glyma.04G185000 Glycine max HOM05D002875 ORTHO05D003215 6.5e-64 248.8 367 36.0
Lj3A20G43 Lonicera japonica HOM05D002875 ORTHO05D003215 6.5e-64 248.8 369 38.8
CiPaw.11G024100 Carya illinoinensis HOM05D002875 ORTHO05D003215 1.1e-63 248.1 367 38.1
arahy.Tifrunner.gnm1.ann1.H1PHD7 Arachis hypogaea HOM05D002875 ORTHO05D003215 1.5e-63 247.7 368 37.8
FAN18G3563 Fragaria x ananassa HOM05D002875 ORTHO05D003215 1.5e-63 247.7 374 37.4
Prupe.5G170900 Prunus persica HOM05D002875 ORTHO05D003215 1.5e-63 247.7 370 37.3
GSVIVG01007718001 Vitis vinifera HOM05D002875 ORTHO05D003215 1.5e-63 247.7 374 37.2
MSTRG.11469 Avicennia marina HOM05D002875 ORTHO05D003215 1.9e-63 247.3 364 39.0
Sabra15G0103500 Salix brachista HOM05D002875 ORTHO05D003215 1.9e-63 247.3 365 37.5
arahy.Tifrunner.gnm1.ann1.Q9ZI40 Arachis hypogaea HOM05D002875 ORTHO05D003215 1.2e-62 244.6 368 37.2
ATR1091G018 Amborella trichopoda HOM05D002875 ORTHO05D003215 2.1e-62 243.8 415 35.4
Ciclev10018615m.g Citrus clementina HOM05D002875 ORTHO05D003215 2.1e-62 243.8 372 36.8
DCAR_016049 Daucus carota HOM05D002875 ORTHO05D003215 2.8e-62 243.4 370 36.2
FvH4_5g05550 Fragaria vesca HOM05D002875 ORTHO05D003215 3.6e-62 243.0 370 37.0
Lalb_Chr11g0071501 Lupinus albus HOM05D002875 ORTHO05D003215 4.7e-62 242.7 367 37.3
Pp3c9_870 Physcomitrium patens HOM05D002875 ORTHO05D003215 4.7e-62 242.7 368 35.9
Oeu016411.4 Olea europaea HOM05D002875 ORTHO05D003215 2.3e-61 240.4 361 38.8
Potri.015G079000 Populus trichocarpa HOM05D002875 ORTHO05D003215 2.3e-61 240.4 369 36.9
Psat0s2176g0120 Pisum sativum HOM05D002875 ORTHO05D003215 3.0e-61 240.0 365 36.7
MD06G1171200 Malus domestica HOM05D002875 ORTHO05D003215 4.0e-61 239.6 370 37.0
Ca_26884_v3 Cicer arietinum L. HOM05D002875 ORTHO05D003215 6.8e-61 238.8 367 37.3
Sed0001364 Sechium edule HOM05D002875 ORTHO05D003215 6.8e-61 238.8 367 36.0
AUR62030942 Chenopodium quinoa HOM05D002875 ORTHO05D003215 8.9e-61 238.4 368 37.8
Dinv25659 Davidia involucrata HOM05D002875 ORTHO05D003215 8.9e-61 238.4 379 37.7
Mapoly0015s0063 Marchantia polymorpha HOM05D002875 ORTHO05D003215 1.2e-60 238.0 367 36.2
C08p23160 Brassica napus HOM05D002875 ORTHO05D003215 2.0e-60 237.3 365 37.8
Potri.012G087400 Populus trichocarpa HOM05D002875 ORTHO05D003215 2.0e-60 237.3 369 36.9
BcaC07g39302 Brassica carinata HOM05D002875 ORTHO05D003215 3.4e-60 236.5 365 37.5
BolC8t49950H Brassica oleracea HOM05D002875 ORTHO05D003215 3.4e-60 236.5 365 37.5
Hma1.2p1_0046F.1_g026650 Hydrangea macrophylla HOM05D002875 ORTHO05D003215 3.4e-60 236.5 327 39.1
Medtr3g077550 Medicago truncatula HOM05D002875 ORTHO05D003215 4.4e-60 236.1 367 35.7
Pp3c9_12560 Physcomitrium patens HOM05D002875 ORTHO05D003215 7.5e-60 235.3 367 36.5
BraA06t25029Z Brassica rapa HOM05D002875 ORTHO05D003215 9.8e-60 235.0 365 37.3
TWI23G1153 Tripterygium wilfordii HOM05D002875 ORTHO05D003215 9.8e-60 235.0 370 36.5
Peaxi162Scf00089g01847 Petunia axillaris HOM05D002875 ORTHO05D003215 1.7e-59 234.2 331 38.4
Thhalv10010082m.g Eutrema salsugineum HOM05D002875 ORTHO05D003215 2.2e-59 233.8 365 37.0
A06p19500 Brassica napus HOM05D002875 ORTHO05D003215 2.8e-59 233.4 365 37.0
CDE01G0076 Ceratophyllum demersum HOM05D002875 ORTHO05D003215 4.9e-59 232.6 333 39.9
AL5G27550 Arabidopsis lyrata HOM05D002875 ORTHO05D003215 1.1e-58 231.5 365 37.0
Carub.0005s1433 Capsella rubella HOM05D002875 ORTHO05D003215 1.1e-58 231.5 365 36.7
TWI39G0667 Tripterygium wilfordii HOM05D002875 ORTHO05D003215 1.8e-58 230.7 327 38.8
Hund02758 Selenicereus undatus HOM05D002875 ORTHO05D003215 4.1e-58 229.6 371 35.8
Lj1g0027129 Lotus japonicus HOM05D002875 ORTHO05D003215 9.2e-58 228.4 367 35.1
AT3G48200 Arabidopsis thaliana HOM05D002875 ORTHO05D003215 2.0e-57 227.3 365 36.4
Lsat_1_v5_gn_4_75800 Lactuca sativa HOM05D002875 ORTHO05D003215 2.0e-57 227.3 332 37.3
Os05g0594500 Oryza sativa ssp. japonica HOM05D002875 ORTHO05D003215 2.0e-57 227.3 384 35.7
GSVIVG01033092001 Vitis vinifera HOM05D002875 ORTHO05D003215 2.0e-57 227.3 265 43.8
HanXRQChr09g0272101 Helianthus annuus HOM05D002875 ORTHO05D003215 4.5e-57 226.1 331 39.3
HanXRQChr15g0463021 Helianthus annuus HOM05D002875 ORTHO05D003215 5.9e-57 225.7 338 37.0
THA.LOC104818213 Tarenaya hassleriana HOM05D002875 ORTHO05D003215 5.9e-57 225.7 331 38.1
Sp5g13820 Schrenkiella parvula HOM05D002875 ORTHO05D003215 1.3e-56 224.6 329 37.4
BcaB01g00838 Brassica carinata HOM05D002875 ORTHO05D003215 1.7e-56 224.2 329 37.7
ECA232G2272 Erigeron canadensis HOM05D002875 ORTHO05D003215 1.7e-56 224.2 336 37.8
HPP92_020270 Vanilla planifolia HOM05D002875 ORTHO05D003215 2.9e-56 223.4 369 34.7
QL10p010243 Quercus lobata HOM05D002875 ORTHO05D003215 1.5e-55 221.1 395 34.9
QL10p009241 Quercus lobata HOM05D002875 ORTHO05D003215 3.3e-55 219.9 395 36.2
QL10p009474 Quercus lobata HOM05D002875 ORTHO05D003215 3.3e-55 219.9 394 36.3
Pp3c1_22410 Physcomitrium patens HOM05D002875 ORTHO05D003215 1.6e-54 217.6 344 35.2
Gohir.D04G076700 Gossypium hirsutum HOM05D002875 ORTHO05D003215 6.1e-54 215.7 200 53.0
Haze_07529 Corylus avellana HOM05D002875 ORTHO05D003215 1.8e-53 214.2 377 35.5
FAN13G1897 Fragaria x ananassa HOM05D002875 ORTHO05D003215 5.2e-53 212.6 322 38.2
QL10p008975 Quercus lobata HOM05D002875 ORTHO05D003215 6.8e-53 212.2 399 34.8
QL10p010194 Quercus lobata HOM05D002875 ORTHO05D003215 8.9e-53 211.8 400 34.8
QL10p009910 Quercus lobata HOM05D002875 ORTHO05D003215 1.2e-52 211.5 405 33.6
QL10p009017 Quercus lobata HOM05D002875 ORTHO05D003215 1.5e-52 211.1 400 34.5
SMO351G0397 Selaginella moellendorffii HOM05D002875 ORTHO05D003215 3.4e-52 209.9 286 37.1
QL10p009076 Quercus lobata HOM05D002875 ORTHO05D003215 4.4e-52 209.5 406 32.8
AUR62008190 Chenopodium quinoa HOM05D002875 ORTHO05D003215 9.8e-52 208.4 324 36.4
QL10p010118 Quercus lobata HOM05D002875 ORTHO05D003215 2.2e-51 207.2 406 33.0
QL10p009197 Quercus lobata HOM05D002875 ORTHO05D003215 4.6e-49 199.5 398 33.9
SMO367G0458 Selaginella moellendorffii HOM05D002875 ORTHO05D003215 1.0e-48 198.4 283 35.7
QL10p009307 Quercus lobata HOM05D002875 ORTHO05D003215 2.5e-47 193.7 415 31.3
QL10p009447 Quercus lobata HOM05D002875 ORTHO05D003215 4.3e-47 193.0 397 33.5
Zm00001eb345460 Zea mays HOM05D002875 ORTHO05D003215 8.0e-46 188.7 383 32.6
Ah.11g051480 Amaranthus hybridus HOM05D002875 ORTHO05D003215 1.2e-44 184.9 324 34.3
EL10Ac5g10726 Beta vulgaris HOM05D002875 ORTHO05D003215 2.0e-44 184.1 377 33.2
QL10p009146 Quercus lobata HOM05D002875 ORTHO05D003215 6.0e-41 172.6 345 32.8
FAN18G4336 Fragaria x ananassa HOM05D002875 ORTHO05D003215 2.5e-39 167.2 323 32.5
CARHR156950 Cardamine hirsuta HOM05D002875 ORTHO05D003215 7.3e-39 165.6 230 40.9
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 9.5e-39 165.2 233 38.6
Sc04g0001700 Simmondsia chinensis HOM05D002875 ORTHO05D003215 4.7e-38 162.9 285 34.4
Atru.chr6.2572 Acer truncatum HOM05D002875 ORTHO05D003215 8.9e-37 158.7 157 51.6
Cpa.g.sc171.14 Carica papaya HOM05D002875 ORTHO05D003215 1.2e-36 158.3 274 35.4
Eucgr.K02827 Eucalyptus grandis HOM05D002875 ORTHO05D003215 7.5e-36 155.6 187 43.9
Actinidia30873 Actinidia chinensis HOM05D002875 ORTHO05D003215 1.4e-34 151.4 139 52.5
Cpa.g.sc76.34 Carica papaya HOM05D002875 ORTHO05D003215 2.1e-33 147.5 201 39.3
Sed0012471 Sechium edule HOM05D002875 ORTHO05D003215 2.1e-33 147.5 185 41.6
SEGI_10049 Sequoiadendron giganteum HOM05D002875 ORTHO05D003215 6.0e-33 146.0 165 46.1
QL10p010149 Quercus lobata HOM05D002875 ORTHO05D003215 1.1e-31 141.7 270 35.2
vmacro18345 Vaccinium macrocarpon HOM05D002875 ORTHO05D003215 8.1e-30 135.6 112 54.5
unitig_26.g9618 Utricularia gibba HOM05D002875 ORTHO05D003215 1.9e-26 124.4 373 27.9
PSO063G4348 Papaver somniferum HOM05D002875 ORTHO05D003215 8.7e-24 115.5 139 43.2
Atru.chr9.2509 Acer truncatum HOM05D002875 ORTHO05D003215 5.6e-23 112.8 226 33.6
TPR.G14262 Trifolium pratense HOM05D002875 ORTHO05D003215 1.6e-22 111.3 212 30.2
Lj5A126T83 Lonicera japonica HOM05D002875 ORTHO05D003215 1.8e-21 107.8 182 34.1
SEGI_02753 Sequoiadendron giganteum HOM05D009476 ORTHO05D014262 5.8e-20 102.8 134 38.1
QL10p009356 Quercus lobata HOM05D002875 ORTHO05D003215 6.4e-19 99.4 199 32.7
QL10p009343 Quercus lobata HOM05D002875 ORTHO05D003215 3.1e-13 80.5 201 33.3
SEGI_01143 Sequoiadendron giganteum HOM05D002875 ORTHO05D003215 3.1e-13 80.5 93 43.0
AagrBONN_evm.TU.Sc2ySwM_228.3556 Anthoceros agrestis HOM05D002875 ORTHO05D003215 5.8e-12 76.3 105 40.0
arahy.Tifrunner.gnm1.ann1.2000FW Arachis hypogaea HOM05D002875 ORTHO05D003215 3.8e-11 73.6 90 41.1
QL10p009041 Quercus lobata HOM05D002875 ORTHO05D003215 5.1e-08 63.2 139 36.0
COL.COLO4_30079 Corchorus olitorius HOM05D002875 ORTHO05D003215 1.6e-06 58.2 113 33.6
Sabra14G0002000 Salix brachista HOM05D002875 ORTHO05D003215 3.7e-06 57.0 94 35.1


User provided reference genes

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