Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1673 Papaver somniferum HOM05D007363 ORTHO05D009018 6.0e-83 310.8 161 100.0
PSO063G1687 Papaver somniferum HOM05D007363 ORTHO05D009018 3.6e-80 301.6 161 96.3
TAR365G0665 Trochodendron aralioides HOM05D007363 ORTHO05D009018 9.0e-55 217.2 161 72.0
Nn3g19660 Nelumbo nucifera HOM05D007363 ORTHO05D009018 1.5e-54 216.5 167 67.7
Aqoxy5G00227 Aquilegia oxysepala HOM05D007363 ORTHO05D009018 2.9e-53 212.2 161 68.3
Potri.002G038200 Populus trichocarpa HOM05D007363 ORTHO05D009018 6.7e-50 201.1 161 65.2
GSVIVG01028336001 Vitis vinifera HOM05D007363 ORTHO05D009018 1.1e-49 200.3 161 64.6
Actinidia25792 Actinidia chinensis HOM05D007363 ORTHO05D009018 4.3e-49 198.4 158 67.1
Dinv22404 Davidia involucrata HOM05D007363 ORTHO05D009018 1.3e-48 196.8 158 67.7
Lj1C66G14 Lonicera japonica HOM05D007363 ORTHO05D009018 1.6e-48 196.4 155 65.8
MD05G1197000 Malus domestica HOM05D007363 ORTHO05D009018 3.7e-48 195.3 153 67.3
CSS0036840 Camellia sinensis var. sinensis HOM05D007363 ORTHO05D009018 4.8e-48 194.9 147 68.0
Peaxi162Scf00013g01119 Petunia axillaris HOM05D007363 ORTHO05D009018 1.1e-47 193.7 124 75.8
Atru.chr5.1691 Acer truncatum HOM05D007363 ORTHO05D009018 1.8e-47 193.0 156 65.4
Potri.005G224600 Populus trichocarpa HOM05D007363 ORTHO05D009018 1.8e-47 193.0 156 64.7
Oeu026230.1 Olea europaea HOM05D007363 ORTHO05D009018 3.1e-47 192.2 154 64.3
Sabra05G0173300 Salix brachista HOM05D007363 ORTHO05D009018 3.1e-47 192.2 154 64.9
PGSC0003DMG400020073 Solanum tuberosum HOM05D007363 ORTHO05D009018 4.0e-47 191.8 124 75.0
Sopen06g035280 Solanum pennellii HOM05D007363 ORTHO05D009018 5.3e-47 191.4 124 74.2
ATR0736G122 Amborella trichopoda HOM05D007363 ORTHO05D009018 6.9e-47 191.0 154 63.6
Solyc06g083880.2 Solanum lycopersicum HOM05D007363 ORTHO05D009018 6.9e-47 191.0 122 74.6
Nitab4.5_0020962g0010 Nicotiana tabacum HOM05D007363 ORTHO05D009018 9.0e-47 190.7 124 74.2
Manes.12G032500 Manihot esculenta HOM05D007363 ORTHO05D009018 1.2e-46 190.3 161 62.7
Rhsim01G0263400 Rhododendron simsii HOM05D007363 ORTHO05D009018 1.5e-46 189.9 161 62.7
Hma1.2p1_0576F.1_g182050 Hydrangea macrophylla HOM05D007363 ORTHO05D009018 2.0e-46 189.5 126 72.2
Lsat_1_v5_gn_9_8480 Lactuca sativa HOM05D007363 ORTHO05D009018 2.6e-46 189.1 156 61.5
Prupe.8G223500 Prunus persica HOM05D007363 ORTHO05D009018 2.6e-46 189.1 153 64.1
DCAR_000936 Daucus carota HOM05D007363 ORTHO05D009018 3.4e-46 188.7 161 62.1
Ciclev10024115m.g Citrus clementina HOM05D007363 ORTHO05D009018 7.6e-46 187.6 126 73.0
HanXRQChr10g0280941 Helianthus annuus HOM05D007363 ORTHO05D009018 7.6e-46 187.6 124 72.6
ECA247G1846 Erigeron canadensis HOM05D007363 ORTHO05D009018 1.7e-45 186.4 157 60.5
QL09p038775 Quercus lobata HOM05D007363 ORTHO05D009018 4.9e-45 184.9 164 61.6
Lj1g0022592 Lotus japonicus HOM05D007363 ORTHO05D009018 6.4e-45 184.5 158 58.2
Cc01_g18330 Coffea canephora HOM05D007363 ORTHO05D009018 5.5e-44 181.4 121 68.6
Cfa002427 Carpinus fangiana HOM05D007363 ORTHO05D009018 7.1e-44 181.0 151 65.6
RcHm_v2.0_Chr6g0288091 Rosa chinensis HOM05D007363 ORTHO05D009018 9.3e-44 180.6 122 73.8
TWI18G0555 Tripterygium wilfordii HOM05D007363 ORTHO05D009018 9.3e-44 180.6 161 59.6
CiPaw.04G186800 Carya illinoinensis HOM05D007363 ORTHO05D009018 1.6e-43 179.9 159 61.6
FAN20G0360 Fragaria x ananassa HOM05D007363 ORTHO05D009018 1.6e-43 179.9 122 71.3
arahy.Tifrunner.gnm1.ann1.1CEJ34 Arachis hypogaea HOM05D007363 ORTHO05D009018 7.9e-43 177.6 125 68.0
FAN24G0389 Fragaria x ananassa HOM05D007363 ORTHO05D009018 7.9e-43 177.6 122 70.5
arahy.Tifrunner.gnm1.ann1.F24DAH Arachis hypogaea HOM05D007363 ORTHO05D009018 2.3e-42 176.0 125 68.0
AUR62011874 Chenopodium quinoa HOM05D005758 ORTHO05D007218 2.3e-42 176.0 124 69.4
Phvul.001G161200 Phaseolus vulgaris HOM05D007363 ORTHO05D009018 2.3e-42 176.0 149 59.7
VMungo1383G1059 Vigna mungo HOM05D007363 ORTHO05D009018 2.3e-42 176.0 149 59.7
Duzib133G1388 Durio zibethinus HOM05D007363 ORTHO05D009018 3.0e-42 175.6 157 59.9
FvH4_2g21450 Fragaria vesca HOM05D007363 ORTHO05D009018 3.0e-42 175.6 159 58.5
Gorai.001G177500 Gossypium raimondii HOM05D007363 ORTHO05D009018 6.7e-42 174.5 159 60.4
Glyma.03G163300 Glycine max HOM05D007363 ORTHO05D009018 8.7e-42 174.1 149 58.4
Gohir.D07G155100 Gossypium hirsutum HOM05D007363 ORTHO05D009018 8.7e-42 174.1 159 60.4
Duzib138G0908 Durio zibethinus HOM05D007363 ORTHO05D009018 1.9e-41 172.9 160 60.0
CANSAT01G1440 Cannabis sativa HOM05D007363 ORTHO05D009018 2.5e-41 172.6 124 68.5
ClCG09G007810 Citrullus lanatus HOM05D007363 ORTHO05D009018 3.3e-41 172.2 155 55.5
Lalb_Chr01g0019641 Lupinus albus HOM05D007363 ORTHO05D009018 4.3e-41 171.8 122 66.4
Gohir.A07G148800 Gossypium hirsutum HOM05D007363 ORTHO05D009018 1.6e-40 169.9 159 59.1
Thecc.01G258000 Theobroma cacao HOM05D007363 ORTHO05D009018 1.6e-40 169.9 125 66.4
AUR62024717 Chenopodium quinoa HOM05D007363 ORTHO05D009018 2.1e-40 169.5 124 66.1
SalBow6G5236 Salvia bowleyana HOM05D007363 ORTHO05D009018 6.2e-40 167.9 123 65.9
Ca_08677_v3 Cicer arietinum L. HOM05D001001 ORTHO05D000808 1.1e-39 167.2 123 65.9
Ca_08711_v3 Cicer arietinum L. HOM05D001001 ORTHO05D000808 1.1e-39 167.2 123 65.9
Medtr7g096960 Medicago truncatula HOM05D007363 ORTHO05D009018 1.8e-39 166.4 123 63.4
FAN15G0604 Fragaria x ananassa HOM05D007363 ORTHO05D009018 3.1e-39 165.6 149 60.4
EL10Ac5g10397 Beta vulgaris HOM05D007363 ORTHO05D009018 5.3e-39 164.9 127 65.4
THA.LOC104814517 Tarenaya hassleriana HOM05D007363 ORTHO05D009018 1.2e-38 163.7 159 54.7
BraA03t10685Z Brassica rapa HOM05D007363 ORTHO05D009018 2.0e-38 162.9 161 57.1
Psat3g056960 Pisum sativum HOM05D007363 ORTHO05D009018 2.0e-38 162.9 158 52.5
COL.COLO4_05892 Corchorus olitorius HOM05D007363 ORTHO05D009018 2.6e-38 162.5 160 53.1
Sp3g33740 Schrenkiella parvula HOM05D007363 ORTHO05D009018 2.6e-38 162.5 161 56.5
Carub.0003s3497 Capsella rubella HOM05D007363 ORTHO05D009018 3.4e-38 162.2 159 55.3
Thhalv10002113m.g Eutrema salsugineum HOM05D007363 ORTHO05D009018 3.4e-38 162.2 162 54.9
AT2G20515 Arabidopsis thaliana HOM05D007363 ORTHO05D009018 4.5e-38 161.8 154 57.1
BcaB01g04373 Brassica carinata HOM05D007363 ORTHO05D009018 4.5e-38 161.8 161 55.3
CARHR111060 Cardamine hirsuta HOM05D007363 ORTHO05D009018 5.8e-38 161.4 161 55.3
AL3G53530 Arabidopsis lyrata HOM05D007363 ORTHO05D009018 1.3e-37 160.2 161 54.7
A03p13820 Brassica napus HOM05D007363 ORTHO05D009018 2.9e-37 159.1 161 55.9
BcaB08g34913 Brassica carinata HOM05D007363 ORTHO05D009018 3.8e-37 158.7 160 54.4
SGA_v2.0_scaffold510G52612 Striga asiatica HOM05D007363 ORTHO05D009018 3.8e-37 158.7 122 63.1
Ah.02g111990 Amaranthus hybridus HOM05D007363 ORTHO05D009018 4.9e-37 158.3 127 64.6
BcaC01g06392 Brassica carinata HOM05D007363 ORTHO05D009018 4.9e-37 158.3 160 55.0
C03p16260 Brassica napus HOM05D007363 ORTHO05D009018 4.9e-37 158.3 160 55.0
BolC3t14048H Brassica oleracea HOM05D007363 ORTHO05D009018 6.5e-37 157.9 160 55.0
CsaV3_7G027320 Cucumis sativus L. HOM05D007363 ORTHO05D009018 2.5e-36 156.0 156 51.9
MBI10_g08049_MAGBIO Magnolia biondii HOM05D007363 ORTHO05D009018 5.5e-36 154.8 109 69.7
Haze_24634 Corylus avellana HOM05D007363 ORTHO05D009018 3.5e-35 152.1 123 65.0
Migut.N02204 Erythranthe guttata HOM05D007363 ORTHO05D009018 4.6e-35 151.8 165 50.9
MELO3C015729.2 Cucumis melo HOM05D007363 ORTHO05D009018 7.9e-35 151.0 160 51.9
Aa31LG8G17460 Aethionema arabicum HOM05D004208 ORTHO05D005156 1.8e-34 149.8 159 52.2
Zm00001eb077670 Zea mays HOM05D007363 ORTHO05D009018 2.3e-34 149.4 124 59.7
Os04g0517000 Oryza sativa ssp. japonica HOM05D007363 ORTHO05D009018 3.9e-34 148.7 123 58.5
PGR042G3583 Punica granatum HOM05D007363 ORTHO05D009018 5.1e-34 148.3 158 54.4
Sed0008485 Sechium edule HOM05D007363 ORTHO05D009018 1.1e-33 147.1 131 53.4
Cpa.g.sc165.9 Carica papaya HOM05D007363 ORTHO05D009018 1.5e-33 146.7 161 50.9
Eucgr.K03259 Eucalyptus grandis HOM05D007363 ORTHO05D009018 4.3e-33 145.2 158 50.6
Eucgr.L02952 Eucalyptus grandis HOM05D007363 ORTHO05D009018 4.3e-33 145.2 158 50.6
unitig_0.g703 Utricularia gibba HOM05D007363 ORTHO05D009018 2.2e-32 142.9 152 52.6
Hund02916 Selenicereus undatus HOM05D004102 ORTHO05D005307 1.1e-31 140.6 106 65.1
Hma1.2p1_0576F.1_g182040 Hydrangea macrophylla HOM05D007363 ORTHO05D009018 4.1e-31 138.7 89 74.2
SEGI_29869 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 3.6e-27 125.6 166 43.4
Lj2P297T63 Lonicera japonica HOM05D007363 ORTHO05D009018 6.7e-26 121.3 97 64.9
FAN27G1204 Fragaria x ananassa HOM05D007363 ORTHO05D009018 4.1e-23 112.1 83 69.9
Lsat_1_v5_gn_3_73760 Lactuca sativa HOM05D007363 ORTHO05D009018 4.2e-20 102.1 122 41.8
Lj5P53T14 Lonicera japonica HOM05D007363 ORTHO05D009018 3.1e-15 85.9 77 59.7
BcaC07g41210 Brassica carinata HOM05D004208 ORTHO05D005156 9.1e-15 84.3 67 61.2
SEGI_36288 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 1.0e-13 80.9 109 38.5
Lj6P94T4 Lonicera japonica HOM05D007363 ORTHO05D009018 6.5e-13 78.2 58 67.2
SEGI_24140 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 1.1e-12 77.4 109 37.6
Lj6P297T4 Lonicera japonica HOM05D007363 ORTHO05D009018 1.9e-12 76.6 58 67.2
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 2.7e-11 72.8 103 39.8
Mapoly0037s0134 Marchantia polymorpha HOM05D007363 ORTHO05D009018 1.4e-10 70.5 108 38.9
Pp3c4_16960 Physcomitrium patens HOM05D003750 ORTHO05D004337 3.9e-10 68.9 106 34.9
Mapoly0022s0141 Marchantia polymorpha HOM05D021038 ORTHO05D009018 1.3e-08 63.9 109 34.9
Pp3c7_26210 Physcomitrium patens HOM05D021038 ORTHO05D009018 1.4e-07 60.5 109 34.9
Pp3c1_6510 Physcomitrium patens HOM05D021038 ORTHO05D009018 4.1e-07 58.9 109 33.9
Pp3c11_23110 Physcomitrium patens HOM05D003750 ORTHO05D004337 1.6e-06 57.0 118 29.7
Mapoly0090s0021 Marchantia polymorpha HOM05D021038 ORTHO05D009018 3.5e-06 55.8 109 33.0
CsaV3_6G015810 Cucumis sativus L. HOM05D003750 ORTHO05D004337 4.5e-06 55.5 87 34.5
MELO3C019689.2 Cucumis melo HOM05D003750 ORTHO05D004337 5.9e-06 55.1 87 34.5


User provided reference genes

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