Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1667 Papaver somniferum HOM05D004301 ORTHO05D005124 2.9e-55 218.4 117 100.0
PSO339G4464 Papaver somniferum HOM05D004301 ORTHO05D005124 1.7e-50 202.6 113 95.6
PSO384G5030 Papaver somniferum HOM05D004301 ORTHO05D005124 1.7e-50 202.6 113 95.6
PSO170G5652 Papaver somniferum HOM05D004301 ORTHO05D005124 9.4e-46 186.8 113 88.5
Nn7g37600 Nelumbo nucifera HOM05D004301 ORTHO05D005124 1.8e-41 172.6 114 82.5
PSO478G1674 Papaver somniferum HOM05D004301 ORTHO05D005124 2.4e-41 172.2 113 85.8
Dinv18010 Davidia involucrata HOM05D004301 ORTHO05D005124 4.1e-41 171.4 113 81.4
CSS0003131 Camellia sinensis var. sinensis HOM05D004301 ORTHO05D005124 5.4e-41 171.0 113 82.3
Cfa000237 Carpinus fangiana HOM05D004301 ORTHO05D005124 7.0e-41 170.6 113 79.6
Sopen02g025120 Solanum pennellii HOM05D004301 ORTHO05D005124 9.1e-41 170.2 113 80.5
Rhsim13G0155100 Rhododendron simsii HOM05D004301 ORTHO05D005124 1.2e-40 169.9 113 81.4
CSS0040354 Camellia sinensis var. sinensis HOM05D004301 ORTHO05D005124 1.6e-40 169.5 113 81.4
Haze_06785 Corylus avellana HOM05D004301 ORTHO05D005124 1.6e-40 169.5 113 79.6
vmacro03693 Vaccinium macrocarpon HOM05D004301 ORTHO05D005124 2.0e-40 169.1 113 80.5
Lj1A1229G41 Lonicera japonica HOM05D004301 ORTHO05D005124 2.7e-40 168.7 114 79.8
Nitab4.5_0007482g0040 Nicotiana tabacum HOM05D004301 ORTHO05D005124 2.7e-40 168.7 113 79.6
Solyc02g080430.3 Solanum lycopersicum HOM05D004301 ORTHO05D005124 2.7e-40 168.7 113 79.6
PGSC0003DMG400016459 Solanum tuberosum HOM05D004301 ORTHO05D005124 2.7e-40 168.7 113 79.6
CSS0019231 Camellia sinensis var. sinensis HOM05D004301 ORTHO05D005124 3.5e-40 168.3 113 81.4
ClCG02G024420 Citrullus lanatus HOM05D005410 ORTHO05D007394 3.5e-40 168.3 113 79.6
MELO3C014729.2 Cucumis melo HOM05D004301 ORTHO05D005124 4.5e-40 167.9 113 79.6
Duzib235G0809 Durio zibethinus HOM05D004301 ORTHO05D005124 4.5e-40 167.9 113 80.5
TAR626G0955 Trochodendron aralioides HOM05D004301 ORTHO05D005124 4.5e-40 167.9 113 80.5
CsaV3_4G017560 Cucumis sativus L. HOM05D004301 ORTHO05D005124 5.9e-40 167.5 113 79.6
Cc00_g00410 Coffea canephora HOM05D004301 ORTHO05D005124 7.7e-40 167.2 117 78.6
TAR629G3276 Trochodendron aralioides HOM05D004301 ORTHO05D005124 7.7e-40 167.2 113 80.5
Nitab4.5_0007007g0030 Nicotiana tabacum HOM05D004301 ORTHO05D005124 1.0e-39 166.8 113 78.8
Cpa.g.sc198.42 Carica papaya HOM05D004301 ORTHO05D005124 1.3e-39 166.4 113 79.6
Ciclev10017125m.g Citrus clementina HOM05D004301 ORTHO05D005124 1.3e-39 166.4 113 80.5
Peaxi162Scf00595g00039 Petunia axillaris HOM05D004301 ORTHO05D005124 1.7e-39 166.0 114 79.8
THA.LOC104806300 Tarenaya hassleriana HOM05D004301 ORTHO05D005124 2.3e-39 165.6 114 78.1
CAN.G1175.8 Capsicum annuum HOM05D004301 ORTHO05D005124 6.6e-39 164.1 113 77.9
Gohir.A06G147900 Gossypium hirsutum HOM05D004301 ORTHO05D005124 8.6e-39 163.7 113 78.8
Rhsim08G0082200 Rhododendron simsii HOM05D004301 ORTHO05D005124 8.6e-39 163.7 113 78.8
Aqoxy3G02575 Aquilegia oxysepala HOM05D004301 ORTHO05D005124 1.1e-38 163.3 122 77.0
SalBow8G0640 Salvia bowleyana HOM05D004301 ORTHO05D005124 1.1e-38 163.3 113 75.2
Gohir.D06G153800 Gossypium hirsutum HOM05D004301 ORTHO05D005124 1.5e-38 162.9 113 78.8
Gorai.010G179800 Gossypium raimondii HOM05D004301 ORTHO05D005124 1.5e-38 162.9 113 78.8
Cc03_g13960 Coffea canephora HOM05D004301 ORTHO05D005124 2.5e-38 162.2 115 77.4
Prupe.4G022700 Prunus persica HOM05D004301 ORTHO05D005124 2.5e-38 162.2 113 78.8
Thecc.06G088100 Theobroma cacao HOM05D004301 ORTHO05D005124 3.3e-38 161.8 113 78.8
Manes.03G210700 Manihot esculenta HOM05D004301 ORTHO05D005124 4.2e-38 161.4 113 77.9
Atru.chr10.2203 Acer truncatum HOM05D004301 ORTHO05D005124 7.2e-38 160.6 114 78.1
MSTRG.7223 Avicennia marina HOM05D004301 ORTHO05D005124 1.2e-37 159.8 114 74.6
ATR0752G175 Amborella trichopoda HOM05D004301 ORTHO05D005124 1.6e-37 159.5 113 76.1
Oeu033197.1 Olea europaea HOM05D004301 ORTHO05D005124 2.1e-37 159.1 114 76.3
THA.LOC104813057 Tarenaya hassleriana HOM05D004301 ORTHO05D005124 2.1e-37 159.1 114 76.3
TWI63G1781 Tripterygium wilfordii HOM05D004301 ORTHO05D005124 2.1e-37 159.1 113 76.1
COL.COLO4_28865 Corchorus olitorius HOM05D004301 ORTHO05D005124 2.8e-37 158.7 113 77.0
Migut.M01306 Erythranthe guttata HOM05D004301 ORTHO05D005124 2.8e-37 158.7 114 73.7
Hund21400 Selenicereus undatus HOM05D004301 ORTHO05D005124 2.8e-37 158.7 113 75.2
Sc05g0009100 Simmondsia chinensis HOM05D004301 ORTHO05D005124 2.8e-37 158.7 114 74.6
ECA248G0561 Erigeron canadensis HOM05D004301 ORTHO05D005124 3.6e-37 158.3 121 72.7
RcHm_v2.0_Chr5g0030661 Rosa chinensis HOM05D004301 ORTHO05D005124 3.6e-37 158.3 113 76.1
SGA_v2.0_scaffold4G01921 Striga asiatica HOM05D004301 ORTHO05D005124 3.6e-37 158.3 117 74.4
Lj5g0024394 Lotus japonicus HOM05D004301 ORTHO05D005124 4.7e-37 157.9 113 76.1
Carub.0006s3270 Capsella rubella HOM05D004301 ORTHO05D005124 8.0e-37 157.1 114 75.4
Oeu037360.1 Olea europaea HOM05D004301 ORTHO05D005124 1.0e-36 156.8 115 74.8
Phvul.007G037700 Phaseolus vulgaris HOM05D004301 ORTHO05D005124 1.0e-36 156.8 113 76.1
TPR.G23756 Trifolium pratense HOM05D004301 ORTHO05D005124 1.0e-36 156.8 113 77.0
unitig_748.g7577 Utricularia gibba HOM05D004301 ORTHO05D005124 1.0e-36 156.8 114 73.7
HPP92_021475 Vanilla planifolia HOM05D004301 ORTHO05D005124 1.0e-36 156.8 113 77.0
arahy.Tifrunner.gnm1.ann1.0XE69C Arachis hypogaea HOM05D004301 ORTHO05D005124 1.4e-36 156.4 113 74.3
Lj2g0004276 Lotus japonicus HOM05D004301 ORTHO05D005124 1.4e-36 156.4 113 75.2
Psat3g175280 Pisum sativum HOM05D004301 ORTHO05D005124 1.8e-36 156.0 113 74.3
AT4G04780 Arabidopsis thaliana HOM05D004301 ORTHO05D005124 2.3e-36 155.6 114 75.4
Sp6g04160 Schrenkiella parvula HOM05D004301 ORTHO05D005124 2.3e-36 155.6 114 73.7
AL6G48270 Arabidopsis lyrata HOM05D004301 ORTHO05D005124 3.0e-36 155.2 114 74.6
CiPaw.09G090400 Carya illinoinensis HOM05D004301 ORTHO05D005124 3.0e-36 155.2 115 73.9
FvH4_3g18180 Fragaria vesca HOM05D004301 ORTHO05D005124 3.0e-36 155.2 113 74.3
FAN16G3380 Fragaria x ananassa HOM05D004301 ORTHO05D005124 3.0e-36 155.2 113 74.3
arahy.Tifrunner.gnm1.ann1.210EWG Arachis hypogaea HOM05D004301 ORTHO05D005124 5.2e-36 154.5 113 73.5
arahy.Tifrunner.gnm1.ann1.6J361A Arachis hypogaea HOM05D004301 ORTHO05D005124 5.2e-36 154.5 113 73.5
arahy.Tifrunner.gnm1.ann1.RW8N71 Arachis hypogaea HOM05D004301 ORTHO05D005124 5.2e-36 154.5 113 73.5
Sabra04G0009400 Salix brachista HOM05D004301 ORTHO05D005124 5.2e-36 154.5 113 77.0
CDE05G1190 Ceratophyllum demersum HOM05D004301 ORTHO05D005124 6.8e-36 154.1 113 75.2
Glyma.10G264300 Glycine max HOM05D004301 ORTHO05D005124 6.8e-36 154.1 113 74.3
Manes.09G000400 Manihot esculenta HOM05D004301 ORTHO05D005124 6.8e-36 154.1 113 75.2
QL05p073536 Quercus lobata HOM05D004301 ORTHO05D005124 8.9e-36 153.7 118 72.9
Potri.004G017100 Populus trichocarpa HOM05D004301 ORTHO05D005124 1.5e-35 152.9 113 76.1
VMungo0720G3170 Vigna mungo HOM05D004301 ORTHO05D005124 1.5e-35 152.9 115 73.9
CARHR252750 Cardamine hirsuta HOM05D004301 ORTHO05D005124 2.0e-35 152.5 115 73.9
Lsat_1_v5_gn_1_128621 Lactuca sativa HOM05D004301 ORTHO05D005124 2.0e-35 152.5 138 65.2
PGR004G0513 Punica granatum HOM05D004301 ORTHO05D005124 2.0e-35 152.5 116 72.4
QL05p073775 Quercus lobata HOM05D004301 ORTHO05D005124 2.0e-35 152.5 118 72.0
RcHm_v2.0_Chr5g0030681 Rosa chinensis HOM05D004301 ORTHO05D005124 2.0e-35 152.5 113 73.5
DCAR_008141 Daucus carota HOM05D004301 ORTHO05D005124 3.4e-35 151.8 116 72.4
Medtr7g037020 Medicago truncatula HOM05D004301 ORTHO05D005124 5.7e-35 151.0 113 74.3
BcaB01g01837 Brassica carinata HOM05D004301 ORTHO05D005124 9.8e-35 150.2 123 69.9
CANSAT56G0804 Cannabis sativa HOM05D004301 ORTHO05D005124 9.8e-35 150.2 117 70.9
Ca_26119_v3 Cicer arietinum L. HOM05D004301 ORTHO05D005124 2.2e-34 149.1 113 72.6
FAN25G1723 Fragaria x ananassa HOM05D004301 ORTHO05D005124 2.8e-34 148.7 113 72.6
FAN12G2174 Fragaria x ananassa HOM05D004301 ORTHO05D005124 3.7e-34 148.3 118 71.2
Lalb_Chr17g0338691 Lupinus albus HOM05D004301 ORTHO05D005124 3.7e-34 148.3 113 71.7
MD10G1319700 Malus domestica HOM05D004301 ORTHO05D005124 4.9e-34 147.9 105 75.2
FAN07G2330 Fragaria x ananassa HOM05D004301 ORTHO05D005124 1.8e-33 146.0 118 69.5
FAN20G0317 Fragaria x ananassa HOM05D004301 ORTHO05D005124 1.8e-33 146.0 113 71.7
MBI16_g31789_MAGBIO Magnolia biondii HOM05D004301 ORTHO05D005124 2.4e-33 145.6 127 66.9
CDE04G1315 Ceratophyllum demersum HOM05D004301 ORTHO05D005124 3.1e-33 145.2 113 71.7
HanXRQChr10g0285201 Helianthus annuus HOM05D004301 ORTHO05D005124 3.1e-33 145.2 134 63.4
unitig_32.g11531 Utricularia gibba HOM05D004301 ORTHO05D005124 3.1e-33 145.2 115 69.6
A09p26100 Brassica napus HOM05D004301 ORTHO05D005124 7.0e-33 144.1 125 65.6
BraA09t38177Z Brassica rapa HOM05D004301 ORTHO05D005124 7.0e-33 144.1 125 65.6
Duzib192G0451 Durio zibethinus HOM05D004301 ORTHO05D005124 7.0e-33 144.1 116 69.0
RcHm_v2.0_Chr4g0426811 Rosa chinensis HOM05D004301 ORTHO05D005124 9.2e-33 143.7 120 69.2
FvH4_4g21200 Fragaria vesca HOM05D004301 ORTHO05D005124 1.2e-32 143.3 122 68.9
Cc00_g35050 Coffea canephora HOM05D004301 ORTHO05D005124 2.7e-32 142.1 112 70.5
SEGI_29072 Sequoiadendron giganteum HOM05D004301 ORTHO05D005124 1.7e-31 139.4 113 66.4
Oeu033198.1 Olea europaea HOM05D004301 ORTHO05D005124 2.3e-31 139.0 97 77.3
Aa31LG9G9690 Aethionema arabicum HOM05D004301 ORTHO05D005124 2.9e-31 138.7 114 68.4
Ah.09g234990 Amaranthus hybridus HOM05D004301 ORTHO05D005124 5.0e-31 137.9 152 54.6
BolC9t56147H Brassica oleracea HOM05D004301 ORTHO05D005124 8.6e-31 137.1 126 63.5
BcaC04g21325 Brassica carinata HOM05D004301 ORTHO05D005124 1.9e-30 136.0 129 62.0
C02p40060 Brassica napus HOM05D004301 ORTHO05D005124 1.9e-30 136.0 113 65.5
C09p33120 Brassica napus HOM05D004301 ORTHO05D005124 1.9e-30 136.0 129 62.0
EL10Ac8g20032 Beta vulgaris HOM05D004301 ORTHO05D005124 2.5e-30 135.6 144 56.2
Prupe.1G108500 Prunus persica HOM05D004301 ORTHO05D005124 1.2e-29 133.3 131 58.8
Mapoly0013s0130 Marchantia polymorpha HOM05D004301 ORTHO05D005124 4.7e-29 131.3 113 60.2
BraA02t07511Z Brassica rapa HOM05D004301 ORTHO05D005124 1.8e-28 129.4 113 64.6
AUR62012686 Chenopodium quinoa HOM05D004301 ORTHO05D005124 2.3e-28 129.0 113 65.5
BcaC03g16234 Brassica carinata HOM05D004301 ORTHO05D005124 4.0e-28 128.3 109 64.2
CDE05G0994 Ceratophyllum demersum HOM05D004301 ORTHO05D005124 8.9e-28 127.1 104 68.3
SEGI_24906 Sequoiadendron giganteum HOM05D004301 ORTHO05D005124 1.2e-27 126.7 143 52.4
AagrBONN_evm.TU.Sc2ySwM_362.2472 Anthoceros agrestis HOM05D004301 ORTHO05D005124 1.7e-26 122.9 113 61.1
Pp3c1_16690 Physcomitrium patens HOM05D004301 ORTHO05D005124 4.9e-26 121.3 113 59.3
A02p25250 Brassica napus HOM05D004301 ORTHO05D005124 6.4e-26 120.9 109 63.3
BcaC03g16233 Brassica carinata HOM05D004301 ORTHO05D005124 2.7e-24 115.5 96 64.6
BolC2t10033H Brassica oleracea HOM05D004301 ORTHO05D005124 4.6e-24 114.8 114 58.8
Psat5g160160 Pisum sativum HOM05D004301 ORTHO05D005124 3.0e-23 112.1 85 70.6
SMO200G0228 Selaginella moellendorffii HOM05D004301 ORTHO05D005124 3.0e-23 112.1 133 53.4
Psat5g160080 Pisum sativum HOM05D004301 ORTHO05D005124 4.3e-22 108.2 85 68.2
CBR_g6572 Chara braunii HOM05D004301 ORTHO05D005124 9.5e-22 107.1 112 55.4
Zm00001eb173130 Zea mays HOM05D004301 ORTHO05D005124 3.6e-21 105.1 141 49.6
FAN21G3317 Fragaria x ananassa HOM05D004301 ORTHO05D005124 2.2e-18 95.9 70 72.9
Medtr1g107580 Medicago truncatula HOM05D004301 ORTHO05D005124 1.9e-17 92.8 85 61.2
Nitab4.5_0003254g0090 Nicotiana tabacum HOM05D004301 ORTHO05D005124 1.9e-17 92.8 58 79.3
CAN.G138.7 Capsicum annuum HOM05D004301 ORTHO05D005124 5.1e-15 84.7 106 43.4
Actinidia26923 Actinidia chinensis HOM05D004301 ORTHO05D005124 4.3e-14 81.6 86 59.3
RcHm_v2.0_Chr4g0426791 Rosa chinensis HOM05D004301 ORTHO05D005124 2.8e-13 79.0 77 59.7
Gohir.D10G075550 Gossypium hirsutum HOM05D004301 ORTHO05D005124 8.1e-13 77.4 54 79.6
Gorai.005G123500 Gossypium raimondii HOM05D004301 ORTHO05D005124 1.4e-12 76.6 55 76.4
BcaB05g23708 Brassica carinata HOM05D004301 ORTHO05D005124 1.8e-12 76.3 112 45.5
Gorai.006G117000 Gossypium raimondii HOM05D004301 ORTHO05D005124 3.1e-12 75.5 54 77.8
Gohir.D02G172033 Gossypium hirsutum HOM05D004301 ORTHO05D005124 4.0e-12 75.1 53 77.4
Nitab4.5_0003254g0080 Nicotiana tabacum HOM05D004301 ORTHO05D005124 5.2e-12 74.7 54 75.9
A05p31460 Brassica napus HOM05D004301 ORTHO05D005124 8.9e-12 73.9 72 56.9
BraA05t21985Z Brassica rapa HOM05D004301 ORTHO05D005124 8.9e-12 73.9 72 56.9
Gohir.D09G045050 Gossypium hirsutum HOM05D004301 ORTHO05D005124 2.6e-11 72.4 54 72.2
MCO03G202 Micromonas commoda HOM05D004301 ORTHO05D005124 3.7e-10 68.6 116 39.7
SGA_v2.0_scaffold14G06848 Striga asiatica HOM05D004301 ORTHO05D005124 8.3e-10 67.4 46 73.9
AUR62021971 Chenopodium quinoa HOM05D004301 ORTHO05D005124 4.1e-09 65.1 45 73.3
Eucgr.G02030 Eucalyptus grandis HOM05D004301 ORTHO05D005124 7.8e-08 60.8 43 74.4
A06p38190 Brassica napus HOM05D004301 ORTHO05D005124 1.9e-06 56.2 97 41.2
BraA06t26734Z Brassica rapa HOM05D004301 ORTHO05D005124 1.9e-06 56.2 97 41.2


User provided reference genes

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