Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1627 Papaver somniferum HOM05D007269 ORTHO05D008531 6.4e-82 307.4 157 100.0
PSO017G6998 Papaver somniferum HOM05D007269 ORTHO05D008531 3.5e-80 301.6 158 98.7
Potri.001G059800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.2e-14 84.0 169 39.6
Thecc.02G201200 Theobroma cacao HOM05D007269 ORTHO05D008531 1.2e-14 84.0 197 35.5
Ciclev10032794m.g Citrus clementina HOM05D007269 ORTHO05D008531 1.5e-14 83.6 156 38.5
CANSAT01G1989 Cannabis sativa HOM05D007269 ORTHO05D008531 3.4e-14 82.4 183 35.0
Duzib084G1105 Durio zibethinus HOM05D007269 ORTHO05D008531 5.7e-14 81.6 154 37.0
Sabra03G0123300 Salix brachista HOM05D007269 ORTHO05D008531 5.7e-14 81.6 181 36.5
TAR622G0366 Trochodendron aralioides HOM05D007269 ORTHO05D008531 7.5e-14 81.3 160 40.0
Aqoxy5G03286 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 1.3e-13 80.5 155 38.1
Aqoxy3G01626 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 1.7e-13 80.1 182 36.3
Nn4g22252 Nelumbo nucifera HOM05D007269 ORTHO05D008531 2.8e-13 79.3 153 37.9
Manes.13G008500 Manihot esculenta HOM05D007269 ORTHO05D008531 1.1e-12 77.4 185 37.3
PGR119G1209 Punica granatum HOM05D007269 ORTHO05D008531 1.4e-12 77.0 157 39.5
MD16G1123500 Malus domestica HOM05D007269 ORTHO05D008531 3.1e-12 75.9 183 34.4
Thecc.03G133000 Theobroma cacao HOM05D007269 ORTHO05D008531 9.2e-12 74.3 154 37.0
RcHm_v2.0_Chr4g0429751 Rosa chinensis HOM05D007269 ORTHO05D008531 2.0e-11 73.2 182 32.4
Cfa009391 Carpinus fangiana HOM05D007269 ORTHO05D008531 3.5e-11 72.4 169 38.5
CSS0016059 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 5.9e-11 71.6 165 35.8
Atru.chr6.1845 Acer truncatum HOM05D007269 ORTHO05D008531 1.0e-10 70.9 152 37.5
Prupe.1G222200 Prunus persica HOM05D007269 ORTHO05D008531 1.3e-10 70.5 177 32.2
Potri.015G099800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.7e-10 70.1 159 35.8
CiPaw.06G105600 Carya illinoinensis HOM05D007269 ORTHO05D008531 2.3e-10 69.7 184 33.7
Manes.12G008000 Manihot esculenta HOM05D007269 ORTHO05D008531 5.0e-10 68.6 165 38.2
Ciclev10032833m.g Citrus clementina HOM05D007269 ORTHO05D008531 1.5e-09 67.0 157 35.0
COL.COLO4_36213 Corchorus olitorius HOM05D007269 ORTHO05D008531 1.9e-09 66.6 157 33.8
ATR0582G094 Amborella trichopoda HOM05D007269 ORTHO05D008531 2.5e-09 66.2 157 31.2
Manes.14G048800 Manihot esculenta HOM05D007269 ORTHO05D008531 2.5e-09 66.2 159 33.3
FvH4_4g23360 Fragaria vesca HOM05D007269 ORTHO05D008531 3.3e-09 65.9 203 28.6
Gorai.002G023300 Gossypium raimondii HOM05D007269 ORTHO05D008531 3.3e-09 65.9 85 42.4
Sabra15G0120500 Salix brachista HOM05D007269 ORTHO05D008531 3.3e-09 65.9 149 36.9
Potri.003G168200 Populus trichocarpa HOM05D007269 ORTHO05D008531 5.6e-09 65.1 112 39.3
QL03p051584 Quercus lobata HOM05D007269 ORTHO05D008531 5.6e-09 65.1 186 32.3
Gohir.A01G022800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 7.3e-09 64.7 85 42.4
Sabra12G0074700 Salix brachista HOM05D001095 ORTHO05D000976 7.3e-09 64.7 148 37.2
Duzib068G0517 Durio zibethinus HOM05D007269 ORTHO05D008531 9.5e-09 64.3 157 33.1
Gohir.D01G020800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 1.2e-08 63.9 85 41.2
Potri.012G101800 Populus trichocarpa HOM05D007269 ORTHO05D008531 2.1e-08 63.2 148 35.1
FAN12G4201 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.8e-08 62.8 196 29.1
FAN17G1902 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.8e-08 62.8 192 28.1
CiPaw.05G106700 Carya illinoinensis HOM05D007269 ORTHO05D008531 4.7e-08 62.0 195 30.8
Cc11_g17250 Coffea canephora HOM05D007269 ORTHO05D008531 4.7e-08 62.0 187 32.6
Gohir.D12G192900 Gossypium hirsutum HOM05D007269 ORTHO05D008531 6.1e-08 61.6 155 34.2
Gorai.008G207700 Gossypium raimondii HOM05D007269 ORTHO05D008531 6.1e-08 61.6 155 34.2
Nn3g16393 Nelumbo nucifera HOM05D007269 ORTHO05D008531 6.1e-08 61.6 170 31.8
TAR629G3154 Trochodendron aralioides HOM05D007269 ORTHO05D008531 1.0e-07 60.8 125 39.2
CARHR257650 Cardamine hirsuta HOM05D012271 ORTHO05D014413 1.4e-07 60.5 151 33.1
Carub.0008s1071 Capsella rubella HOM05D012271 ORTHO05D014413 2.3e-07 59.7 150 34.0
BcaB05g24038 Brassica carinata HOM05D012271 ORTHO05D014413 4.0e-07 58.9 149 29.5
MBI07_g46909_MAGBIO Magnolia biondii HOM05D007269 ORTHO05D008531 4.0e-07 58.9 195 27.2
TAR374G0918 Trochodendron aralioides HOM05D007269 ORTHO05D008531 4.0e-07 58.9 91 41.8
Cfa018768 Carpinus fangiana HOM05D007269 ORTHO05D008531 5.2e-07 58.5 154 32.5
Rhsim12G0023500 Rhododendron simsii HOM05D007269 ORTHO05D008531 5.2e-07 58.5 149 34.9
Nitab4.5_0000021g1020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 6.8e-07 58.2 185 30.8
QL10p002347 Quercus lobata HOM05D007269 ORTHO05D008531 8.9e-07 57.8 154 31.8
Gohir.A12G190800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 1.2e-06 57.4 155 32.9
HanXRQChr08g0236471 Helianthus annuus HOM05D007269 ORTHO05D008531 1.5e-06 57.0 173 32.9
CsaV3_6G008060 Cucumis sativus L. HOM05D026927 ORTHO05D008531 3.4e-06 55.8 144 34.7
Dinv23173 Davidia involucrata HOM05D007269 ORTHO05D008531 4.4e-06 55.5 171 33.9
AL8G24870 Arabidopsis lyrata HOM05D012271 ORTHO05D014413 7.5e-06 54.7 150 32.0
CSS0011599 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 9.8e-06 54.3 148 32.4


User provided reference genes

Program Settings