Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1620 Papaver somniferum HOM05D005746 ORTHO05D007105 0.0e+00 4408.6 2207 100.0
TAR374G0083 Trochodendron aralioides HOM05D005746 ORTHO05D007105 0.0e+00 2901.3 2233 66.5
Aqoxy3G00678 Aquilegia oxysepala HOM05D005746 ORTHO05D007105 0.0e+00 2848.5 2231 64.9
Nn4g23132 Nelumbo nucifera HOM05D005746 ORTHO05D007105 0.0e+00 2819.6 2203 65.8
Dinv33748 Davidia involucrata HOM05D005746 ORTHO05D007105 0.0e+00 2766.9 2234 64.4
CSS0043134 Camellia sinensis var. sinensis HOM05D005746 ORTHO05D007105 0.0e+00 2645.9 2236 61.5
Haze_14549 Corylus avellana HOM05D005746 ORTHO05D007105 0.0e+00 2634.4 2233 61.0
Cfa007537 Carpinus fangiana HOM05D005746 ORTHO05D007105 0.0e+00 2626.3 2237 60.8
MBI05_g35450_MAGBIO Magnolia biondii HOM05D005746 ORTHO05D007105 0.0e+00 2610.9 2261 60.8
CSS0009890 Camellia sinensis var. sinensis HOM05D005746 ORTHO05D007105 0.0e+00 2590.8 2236 60.8
QL02p081653 Quercus lobata HOM05D005746 ORTHO05D007105 0.0e+00 2575.8 2244 60.0
Atru.chr8.140 Acer truncatum HOM05D005746 ORTHO05D007105 0.0e+00 2574.3 2234 60.1
Actinidia06086 Actinidia chinensis HOM05D005746 ORTHO05D007105 0.0e+00 2565.4 2233 60.3
RcHm_v2.0_Chr2g0168711 Rosa chinensis HOM05D005746 ORTHO05D007105 0.0e+00 2560.0 2228 59.8
MD17G1050300 Malus domestica HOM05D005746 ORTHO05D007105 0.0e+00 2540.8 2239 59.6
CiPaw.03G027900 Carya illinoinensis HOM05D005746 ORTHO05D007105 0.0e+00 2540.4 2240 60.2
MD09G1049900 Malus domestica HOM05D005746 ORTHO05D007105 0.0e+00 2538.1 2244 59.3
Rhsim10G0040100 Rhododendron simsii HOM05D005746 ORTHO05D007105 0.0e+00 2537.3 2253 59.8
vmacro05704 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 0.0e+00 2527.7 2232 59.5
vmacro17103 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 0.0e+00 2523.4 2232 59.4
Potri.004G128601 Populus trichocarpa HOM05D005746 ORTHO05D007105 0.0e+00 2490.7 2250 58.2
FvH4_6g48870 Fragaria vesca HOM05D005746 ORTHO05D007105 0.0e+00 2489.5 2226 58.9
COL.COLO4_33291 Corchorus olitorius HOM05D005746 ORTHO05D007105 0.0e+00 2487.2 2248 58.1
TWI34G0228 Tripterygium wilfordii HOM05D005746 ORTHO05D007105 0.0e+00 2487.2 2249 58.5
FAN02G0556 Fragaria x ananassa HOM05D005746 ORTHO05D007105 0.0e+00 2483.0 2230 58.9
Duzib147G0034 Durio zibethinus HOM05D005746 ORTHO05D007105 0.0e+00 2481.4 2249 57.9
Sc14g0005950 Simmondsia chinensis HOM05D005746 ORTHO05D007105 0.0e+00 2454.5 2232 58.0
MELO3C009878.2 Cucumis melo HOM05D005746 ORTHO05D007105 0.0e+00 2451.8 2240 58.1
ClCG10G014980 Citrullus lanatus HOM05D005746 ORTHO05D007105 0.0e+00 2444.5 2233 58.1
Gohir.A09G017100 Gossypium hirsutum HOM05D005746 ORTHO05D007105 0.0e+00 2442.2 2243 57.1
Gorai.006G018000 Gossypium raimondii HOM05D005746 ORTHO05D007105 0.0e+00 2434.1 2250 57.0
Sabra04G0090500 Salix brachista HOM05D005746 ORTHO05D007105 0.0e+00 2412.5 2245 56.9
vmacro05746 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 0.0e+00 2412.5 2232 57.6
Hund15611 Selenicereus undatus HOM05D005746 ORTHO05D007105 0.0e+00 2405.9 2225 57.0
Sed0005323 Sechium edule HOM05D005746 ORTHO05D007105 0.0e+00 2396.3 2229 56.8
Cc07_g03290 Coffea canephora HOM05D005746 ORTHO05D007105 0.0e+00 2387.8 2236 56.4
Eucgr.J01361 Eucalyptus grandis HOM05D005746 ORTHO05D007105 0.0e+00 2372.8 2235 56.0
Nitab4.5_0002923g0020 Nicotiana tabacum HOM05D005746 ORTHO05D007105 0.0e+00 2366.3 2234 56.7
arahy.Tifrunner.gnm1.ann1.C4FZ3V Arachis hypogaea HOM05D005746 ORTHO05D007105 0.0e+00 2362.4 2233 56.1
CAN.G1205.1 Capsicum annuum HOM05D005746 ORTHO05D007105 0.0e+00 2359.3 2229 56.5
Solyc03g062650.3 Solanum lycopersicum HOM05D005746 ORTHO05D007105 0.0e+00 2358.6 2237 56.1
Sopen03g014980 Solanum pennellii HOM05D005746 ORTHO05D007105 0.0e+00 2355.9 2232 56.3
Lj2g0006836 Lotus japonicus HOM05D005746 ORTHO05D007105 0.0e+00 2352.0 2235 56.0
arahy.Tifrunner.gnm1.ann1.IK9RDG Arachis hypogaea HOM05D005746 ORTHO05D007105 0.0e+00 2350.5 2231 55.8
Oeu060938.1 Olea europaea HOM05D005746 ORTHO05D007105 0.0e+00 2349.3 2262 55.6
Peaxi162Scf00451g00821 Petunia axillaris HOM05D005746 ORTHO05D007105 0.0e+00 2348.5 2244 56.2
AUR62034394 Chenopodium quinoa HOM05D005746 ORTHO05D007105 0.0e+00 2342.8 2224 56.5
THA.LOC104823176 Tarenaya hassleriana HOM05D005746 ORTHO05D007105 0.0e+00 2339.3 2235 55.5
Phvul.004G028000 Phaseolus vulgaris HOM05D005746 ORTHO05D007105 0.0e+00 2337.4 2232 56.0
AUR62039819 Chenopodium quinoa HOM05D005746 ORTHO05D007105 0.0e+00 2335.8 2228 55.9
VMungo0464G0495 Vigna mungo HOM05D005746 ORTHO05D007105 0.0e+00 2333.1 2232 56.0
DCAR_021658 Daucus carota HOM05D005746 ORTHO05D007105 0.0e+00 2332.8 2247 55.2
HanXRQChr14g0439111 Helianthus annuus HOM05D005746 ORTHO05D007105 0.0e+00 2331.2 2230 55.6
PGR083G2853 Punica granatum HOM05D005746 ORTHO05D007105 0.0e+00 2322.7 2221 55.7
Migut.H00912 Erythranthe guttata HOM05D005746 ORTHO05D007105 0.0e+00 2322.4 2240 55.5
ECA246G0262 Erigeron canadensis HOM05D005746 ORTHO05D007105 0.0e+00 2318.9 2227 56.0
Glyma.19G021700 Glycine max HOM05D005746 ORTHO05D007105 0.0e+00 2317.0 2234 55.7
MSTRG.3234 Avicennia marina HOM05D005746 ORTHO05D007105 0.0e+00 2315.0 2244 55.3
EL10Ac2g02971 Beta vulgaris HOM05D005746 ORTHO05D007105 0.0e+00 2305.4 2223 55.5
Medtr6g011760 Medicago truncatula HOM05D005746 ORTHO05D007105 0.0e+00 2302.3 2232 55.5
Ca_04277_v3 Cicer arietinum L. HOM05D005746 ORTHO05D007105 0.0e+00 2297.3 2233 55.0
Psat1g074560 Pisum sativum HOM05D005746 ORTHO05D007105 0.0e+00 2296.5 2234 55.3
Lalb_Chr06g0175391 Lupinus albus HOM05D005746 ORTHO05D007105 0.0e+00 2287.3 2246 55.3
TPR.G10375 Trifolium pratense HOM05D005746 ORTHO05D007105 0.0e+00 2284.6 2235 54.9
Ciclev10010889m.g Citrus clementina HOM05D005746 ORTHO05D007105 0.0e+00 2265.7 2265 55.2
Aa31LG2G4330 Aethionema arabicum HOM05D005746 ORTHO05D007105 0.0e+00 2260.0 2254 54.7
SGA_v2.0_scaffold1G00328 Striga asiatica HOM05D005746 ORTHO05D007105 0.0e+00 2234.1 2239 53.6
AT3G55160 Arabidopsis thaliana HOM05D005746 ORTHO05D007105 0.0e+00 2233.8 2225 54.4
AL5G36280 Arabidopsis lyrata HOM05D005746 ORTHO05D007105 0.0e+00 2220.3 2227 54.1
Thhalv10003503m.g Eutrema salsugineum HOM05D005746 ORTHO05D007105 0.0e+00 2217.2 2228 54.4
Sp2g17500 Schrenkiella parvula HOM05D005746 ORTHO05D007105 0.0e+00 2216.0 2232 54.2
CARHR165190 Cardamine hirsuta HOM05D005746 ORTHO05D007105 0.0e+00 2206.0 2229 54.3
Lsat_1_v5_gn_3_100801 Lactuca sativa HOM05D005746 ORTHO05D007105 0.0e+00 2201.4 2241 54.0
A06p40280 Brassica napus HOM05D005746 ORTHO05D007105 0.0e+00 2199.9 2223 54.3
BraA06t26946Z Brassica rapa HOM05D005746 ORTHO05D007105 0.0e+00 2199.9 2223 54.3
C07p37790 Brassica napus HOM05D005746 ORTHO05D007105 0.0e+00 2190.2 2227 54.0
BolC7t44300H Brassica oleracea HOM05D005746 ORTHO05D007105 0.0e+00 2190.2 2227 54.0
ATR0564G261 Amborella trichopoda HOM05D005746 ORTHO05D007105 0.0e+00 2185.6 2317 52.3
FAN09G1953 Fragaria x ananassa HOM05D005746 ORTHO05D007105 0.0e+00 2158.3 1896 59.7
Prupe.3G268800 Prunus persica HOM05D005746 ORTHO05D007105 0.0e+00 2131.7 1833 61.0
Thecc.04G080100 Theobroma cacao HOM05D005746 ORTHO05D007105 0.0e+00 2112.0 1835 60.2
vmacro22549 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 0.0e+00 2111.3 2325 51.0
Zm00001eb414960 Zea mays HOM05D005746 ORTHO05D007105 0.0e+00 2101.2 2251 51.5
HPP92_011243 Vanilla planifolia HOM05D005746 ORTHO05D007105 0.0e+00 2095.9 2227 52.0
Manes.15G175000 Manihot esculenta HOM05D005746 ORTHO05D007105 0.0e+00 2081.2 1832 59.7
BcaC06g33649 Brassica carinata HOM05D005746 ORTHO05D007105 0.0e+00 2077.0 2228 52.2
Carub.0005s2180 Capsella rubella HOM05D005746 ORTHO05D007105 0.0e+00 2048.9 2050 54.4
Gohir.D09G015800 Gossypium hirsutum HOM05D005746 ORTHO05D007105 0.0e+00 1911.3 1724 58.0
GSVIVG01011388001 Vitis vinifera HOM05D005746 ORTHO05D007105 0.0e+00 1839.3 2209 48.6
SEGI_38380 Sequoiadendron giganteum HOM05D005746 ORTHO05D007105 0.0e+00 1833.5 2391 44.6
Cpa.g.sc14.10 Carica papaya HOM05D005746 ORTHO05D007105 0.0e+00 1684.8 1423 62.5
Os08g0169700 Oryza sativa ssp. japonica HOM05D005746 ORTHO05D007105 0.0e+00 1601.6 1707 52.4
Mapoly0207s0007 Marchantia polymorpha HOM05D005746 ORTHO05D007105 0.0e+00 1466.8 2359 39.6
Pp3c6_28730 Physcomitrium patens HOM05D005746 ORTHO05D007105 0.0e+00 1449.5 2369 37.8
Lju41C18T12 Lonicera japonica HOM05D005746 ORTHO05D007105 0.0e+00 1449.1 1378 56.7
SMO367G0809 Selaginella moellendorffii HOM05D005746 ORTHO05D007105 0.0e+00 1323.1 2258 37.7
unitig_0.g531 Utricularia gibba HOM05D005746 ORTHO05D007105 0.0e+00 1269.6 2201 37.8
VMungo0464G0208 Vigna mungo HOM05D005746 ORTHO05D007105 0.0e+00 1247.3 1128 58.7
CsaV3_3G041540 Cucumis sativus L. HOM05D005746 ORTHO05D007105 0.0e+00 1208.4 1018 61.0
CsaV3_3G041530 Cucumis sativus L. HOM05D005746 ORTHO05D007105 0.0e+00 1171.4 1214 54.1
CDE09G0909 Ceratophyllum demersum HOM05D005746 ORTHO05D007105 0.0e+00 1104.4 1417 46.2
Duzib147G0404 Durio zibethinus HOM05D005746 ORTHO05D007105 0.0e+00 1091.6 945 59.6
vmacro05484 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 7.7e-298 1028.5 1057 53.6
Lju41A18T48 Lonicera japonica HOM05D005746 ORTHO05D007105 1.1e-272 944.9 783 62.7
vmacro05485 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 1.0e-262 911.8 1019 51.3
CBR_g50021 Chara braunii HOM05D005746 ORTHO05D007105 9.2e-259 898.7 2585 28.9
CDE09G1403 Ceratophyllum demersum HOM05D005746 ORTHO05D007105 1.5e-229 801.6 720 57.9
BcaNung05131 Brassica carinata HOM05D005746 ORTHO05D007105 3.3e-208 730.7 871 48.0
AagrBONN_evm.TU.Sc2ySwM_369.379 Anthoceros agrestis HOM05D005746 ORTHO05D007105 9.0e-206 722.6 1373 36.7
BcaC06g33650 Brassica carinata HOM05D005746 ORTHO05D007105 2.3e-156 558.5 1009 38.1
MCO11G207 Micromonas commoda HOM05D005746 ORTHO05D007105 1.6e-154 552.4 2353 25.4
Cpa.g.sc14.9 Carica papaya HOM05D005746 ORTHO05D007105 7.8e-117 427.2 438 50.7
Gohir.D09G015833 Gossypium hirsutum HOM05D005746 ORTHO05D007105 1.7e-95 356.3 380 50.8
CAN.G284.10 Capsicum annuum HOM05D005746 ORTHO05D007105 2.6e-80 305.8 330 51.2
CARHR159400 Cardamine hirsuta HOM05D005746 ORTHO05D007105 2.2e-71 276.2 286 55.2
CAN.G691.2 Capsicum annuum HOM05D005746 ORTHO05D007105 1.6e-69 270.0 314 46.8
CAN.G65.185 Capsicum annuum HOM05D005746 ORTHO05D007105 1.7e-63 250.0 340 43.5
Migut.L00530 Erythranthe guttata HOM05D005746 ORTHO05D007105 2.8e-58 232.6 763 28.3
CAN.G525.35 Capsicum annuum HOM05D005746 ORTHO05D007105 3.5e-56 225.7 234 50.0
CAN.G697.12 Capsicum annuum HOM05D005746 ORTHO05D007105 3.0e-52 212.6 241 46.1
CsaV3_UNG114880 Cucumis sativus L. HOM05D005746 ORTHO05D007105 4.0e-52 212.2 182 66.5
CAN.G352.19 Capsicum annuum HOM05D005746 ORTHO05D007105 1.2e-48 200.7 282 41.8
Lj2g0022018 Lotus japonicus HOM05D005746 ORTHO05D007105 2.7e-40 172.9 142 65.5
AagrBONN_evm.TU.Sc2ySwM_369.378 Anthoceros agrestis HOM05D005746 ORTHO05D007105 5.0e-39 168.7 486 30.0
CAN.G385.2 Capsicum annuum HOM05D005746 ORTHO05D007105 2.8e-37 162.9 230 43.5
VMungo1127G1036 Vigna mungo HOM05D005746 ORTHO05D007105 8.3e-34 151.4 93 79.6
Cre15.g642050 Chlamydomonas reinhardtii HOM05D005746 ORTHO05D007105 8.9e-28 131.3 285 33.3
Gohir.A11G290200 Gossypium hirsutum HOM05D005746 ORTHO05D007105 4.9e-26 125.6 112 58.0
CAN.G853.24 Capsicum annuum HOM05D005746 ORTHO05D007105 4.1e-25 122.5 146 45.2
VMungo0331G1774 Vigna mungo HOM05D005746 ORTHO05D007105 6.2e-21 108.6 98 57.1
AagrBONN_evm.TU.Sc2ySwM_369.374 Anthoceros agrestis HOM05D005746 ORTHO05D007105 9.8e-19 101.3 109 45.0
VMungo1127G1975 Vigna mungo HOM05D005746 ORTHO05D007105 2.2e-18 100.1 99 57.6
Cfa022176 Carpinus fangiana HOM05D005746 ORTHO05D125765 2.9e-18 99.8 718 21.4


User provided reference genes

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