Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1525 Papaver somniferum HOM05D042328 ORTHO05D009956 1.4e-81 306.2 153 100.0
PSO478G2273 Papaver somniferum HOM05D042328 ORTHO05D009956 3.8e-79 298.1 153 96.7
Duzib084G1352 Durio zibethinus HOM05D008563 ORTHO05D009802 3.6e-13 79.0 164 40.9
Thecc.03G112200 Theobroma cacao HOM05D008563 ORTHO05D009802 3.1e-12 75.9 157 39.5
Sed0005169 Sechium edule HOM05D008563 ORTHO05D009802 1.2e-11 73.9 146 41.1
Sed0012187 Sechium edule HOM05D008563 ORTHO05D009802 3.4e-11 72.4 149 39.6
CSS0016849 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 4.4e-11 72.0 154 41.6
CSS0048960 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 2.9e-10 69.3 154 40.9
COL.COLO4_28804 Corchorus olitorius HOM05D008563 ORTHO05D009802 3.8e-10 68.9 167 39.5
CSS0034251 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 5.4e-09 65.1 157 40.1
CSS0042453 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 5.4e-09 65.1 157 40.1
Medtr4g112870 Medicago truncatula HOM05D008563 ORTHO05D009802 5.4e-09 65.1 125 40.8
Manes.02G062300 Manihot esculenta HOM05D008889 ORTHO05D009956 7.1e-09 64.7 115 42.6
Phvul.008G023501 Phaseolus vulgaris HOM05D008889 ORTHO05D009956 9.2e-09 64.3 124 42.7
TPR.G2004 Trifolium pratense HOM05D008563 ORTHO05D009802 9.2e-09 64.3 129 38.0
Lj1g0003987 Lotus japonicus HOM05D008889 ORTHO05D009956 1.2e-08 63.9 118 44.1
MD17G1069000 Malus domestica HOM05D008889 ORTHO05D009956 6.0e-08 61.6 124 39.5
Nn4g23603 Nelumbo nucifera HOM05D017299 ORTHO05D009802 6.0e-08 61.6 165 35.2
Gorai.008G201100 Gossypium raimondii HOM05D008563 ORTHO05D009802 1.0e-07 60.8 137 38.7
Manes.01G105700 Manihot esculenta HOM05D008889 ORTHO05D009956 1.3e-07 60.5 120 44.2
Gohir.D12G187700 Gossypium hirsutum HOM05D008563 ORTHO05D009802 1.7e-07 60.1 137 38.7
Lsat_1_v5_gn_4_113140 Lactuca sativa HOM05D038017 ORTHO05D009802 2.3e-07 59.7 101 44.6
Nn3g17602 Nelumbo nucifera HOM05D008563 ORTHO05D009802 2.3e-07 59.7 159 35.2
Lj4g0009196 Lotus japonicus HOM05D008563 ORTHO05D009802 3.0e-07 59.3 120 40.0
ECA246G0528 Erigeron canadensis HOM05D008563 ORTHO05D009802 5.1e-07 58.5 152 39.5
C02p56090 Brassica napus HOM05D009227 ORTHO05D009956 1.1e-06 57.4 78 51.3
BolC2t11666H Brassica oleracea HOM05D009227 ORTHO05D009956 1.1e-06 57.4 78 51.3
Potri.004G108840 Populus trichocarpa HOM05D008889 ORTHO05D009956 1.1e-06 57.4 93 45.2
Potri.017G107000 Populus trichocarpa HOM05D008889 ORTHO05D009956 1.5e-06 57.0 116 40.5
PGSC0003DMG400004059 Solanum tuberosum HOM05D014920 ORTHO05D009802 1.5e-06 57.0 168 36.3
Aqoxy3G00592 Aquilegia oxysepala HOM05D042328 ORTHO05D009802 1.9e-06 56.6 153 34.6
TWI60G1323 Tripterygium wilfordii HOM05D008889 ORTHO05D009956 1.9e-06 56.6 79 44.3
Glyma.08G254600 Glycine max HOM05D008889 ORTHO05D009956 2.5e-06 56.2 127 37.8
Sabra04G0073700 Salix brachista HOM05D008889 ORTHO05D009956 2.5e-06 56.2 110 42.7
BcaB07g30061 Brassica carinata HOM05D009227 ORTHO05D009956 3.3e-06 55.8 77 50.6
Sabra17G0089900 Salix brachista HOM05D008889 ORTHO05D009956 3.3e-06 55.8 146 39.0
A02p37090 Brassica napus HOM05D009227 ORTHO05D009956 4.3e-06 55.5 78 48.7
BraA02t08695Z Brassica rapa HOM05D009227 ORTHO05D009956 4.3e-06 55.5 78 48.7
Medtr7g017790 Medicago truncatula HOM05D008889 ORTHO05D009956 5.6e-06 55.1 124 39.5
TPR.G3280 Trifolium pratense HOM05D008889 ORTHO05D009956 5.6e-06 55.1 130 39.2
Psat4g045520 Pisum sativum HOM05D008563 ORTHO05D009802 7.3e-06 54.7 131 37.4
Gohir.D03G099300 Gossypium hirsutum HOM05D008563 ORTHO05D009802 9.6e-06 54.3 152 34.9


User provided reference genes

Program Settings