Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1487 Papaver somniferum HOM05D006982 ORTHO05D008909 1.1e-95 353.6 213 100.0
PSO478G0313 Papaver somniferum HOM05D006982 ORTHO05D008909 1.4e-84 316.6 168 92.3
Atru.chr8.390 Acer truncatum HOM05D006982 ORTHO05D008909 2.8e-64 249.2 153 78.4
TAR629G3328 Trochodendron aralioides HOM05D006982 ORTHO05D008909 8.2e-64 247.7 158 72.8
Aqoxy3G00454 Aquilegia oxysepala HOM05D006982 ORTHO05D008909 1.1e-63 247.3 153 77.1
Nn4g23351 Nelumbo nucifera HOM05D006982 ORTHO05D008909 2.4e-63 246.1 154 74.7
Duzib187G0332 Durio zibethinus HOM05D006982 ORTHO05D008909 9.1e-63 244.2 161 71.4
AL5G19280 Arabidopsis lyrata HOM05D006982 ORTHO05D008909 1.5e-62 243.4 151 76.2
Thecc.04G091200 Theobroma cacao HOM05D006982 ORTHO05D008909 2.0e-62 243.0 154 75.3
AT3G29280 Arabidopsis thaliana HOM05D006982 ORTHO05D008909 3.4e-62 242.3 153 74.5
Potri.017G090400 Populus trichocarpa HOM05D006982 ORTHO05D008909 3.4e-62 242.3 159 72.3
CANSAT64G0008 Cannabis sativa HOM05D006982 ORTHO05D008909 7.7e-62 241.1 154 74.7
Sp2g17880 Schrenkiella parvula HOM05D006982 ORTHO05D008909 7.7e-62 241.1 161 72.7
CiPaw.03G091200 Carya illinoinensis HOM05D006982 ORTHO05D008909 1.0e-61 240.7 162 71.6
Aa31LG2G3980 Aethionema arabicum HOM05D006982 ORTHO05D008909 1.3e-61 240.4 154 73.4
Thhalv10005014m.g Eutrema salsugineum HOM05D006982 ORTHO05D008909 1.7e-61 240.0 161 71.4
Manes.01G098700 Manihot esculenta HOM05D006982 ORTHO05D008909 1.7e-61 240.0 156 71.8
BcaB07g30087 Brassica carinata HOM05D006982 ORTHO05D008909 2.2e-61 239.6 161 72.0
QL02p039506 Quercus lobata HOM05D006982 ORTHO05D008909 2.2e-61 239.6 155 74.8
Haze_14468 Corylus avellana HOM05D006982 ORTHO05D008909 2.9e-61 239.2 159 71.7
A06p40000 Brassica napus HOM05D006982 ORTHO05D008909 3.8e-61 238.8 153 74.5
Carub.0005s0799 Capsella rubella HOM05D006982 ORTHO05D008909 3.8e-61 238.8 161 71.4
Dinv11484 Davidia involucrata HOM05D006982 ORTHO05D008909 8.5e-61 237.7 153 73.2
A02p36510 Brassica napus HOM05D006982 ORTHO05D008909 1.1e-60 237.3 153 73.2
BraA02t08647Z Brassica rapa HOM05D006982 ORTHO05D008909 1.1e-60 237.3 153 73.2
THA.LOC104805498 Tarenaya hassleriana HOM05D006982 ORTHO05D008909 1.4e-60 236.9 151 72.8
Gohir.D09G010400 Gossypium hirsutum HOM05D006982 ORTHO05D008909 2.5e-60 236.1 162 69.8
Lalb_Chr02g0159031 Lupinus albus HOM05D006982 ORTHO05D008909 2.5e-60 236.1 154 70.8
BcaC03g17569 Brassica carinata HOM05D006982 ORTHO05D008909 3.2e-60 235.7 153 73.2
C02p55480 Brassica napus HOM05D006982 ORTHO05D008909 3.2e-60 235.7 153 73.9
BolC2t11604H Brassica oleracea HOM05D006982 ORTHO05D008909 3.2e-60 235.7 153 73.9
Ciclev10012958m.g Citrus clementina HOM05D006982 ORTHO05D008909 3.2e-60 235.7 155 72.9
Glyma.13G058700 Glycine max HOM05D006982 ORTHO05D008909 3.2e-60 235.7 158 71.5
MSTRG.3019 Avicennia marina HOM05D006982 ORTHO05D008909 4.2e-60 235.3 156 70.5
Gorai.006G012000 Gossypium raimondii HOM05D006982 ORTHO05D008909 5.5e-60 235.0 162 69.1
Hma1.2p1_1813F.1_g303760 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 5.5e-60 235.0 153 73.2
vmacro05662 Vaccinium macrocarpon HOM05D006982 ORTHO05D008909 9.4e-60 234.2 151 74.2
GSVIVG01011493001 Vitis vinifera HOM05D006982 ORTHO05D008909 1.2e-59 233.8 161 68.9
Hma1.2p1_3044F.1_g332060 Hydrangea macrophylla HOM05D006982 ORTHO05D008909 1.6e-59 233.4 153 72.5
BolC7t44339H Brassica oleracea HOM05D006982 ORTHO05D008909 2.1e-59 233.0 151 73.5
Sc11g0004740 Simmondsia chinensis HOM05D006982 ORTHO05D008909 2.1e-59 233.0 161 70.2
Nitab4.5_0005196g0040 Nicotiana tabacum HOM05D006982 ORTHO05D008909 3.6e-59 232.3 157 70.7
RcHm_v2.0_Chr2g0166501 Rosa chinensis HOM05D006982 ORTHO05D008909 3.6e-59 232.3 156 73.7
CARHR292480 Cardamine hirsuta HOM05D006982 ORTHO05D008909 1.0e-58 230.7 151 71.5
CsaV3_3G026330 Cucumis sativus L. HOM05D006982 ORTHO05D008909 1.4e-58 230.3 152 72.4
FvH4_6g47420 Fragaria vesca HOM05D006982 ORTHO05D008909 1.4e-58 230.3 156 71.2
FAN14G3321 Fragaria x ananassa HOM05D006982 ORTHO05D008909 1.4e-58 230.3 156 71.2
Cc07_g04010 Coffea canephora HOM05D006982 ORTHO05D008909 1.8e-58 229.9 154 69.5
Prupe.3G258600 Prunus persica HOM05D006982 ORTHO05D008909 1.8e-58 229.9 167 69.5
Rhsim10G0045300 Rhododendron simsii HOM05D006982 ORTHO05D008909 2.3e-58 229.6 151 73.5
MD09G1061600 Malus domestica HOM05D006982 ORTHO05D008909 3.0e-58 229.2 156 69.9
RcHm_v2.0_Chr2g0166491 Rosa chinensis HOM05D006982 ORTHO05D008909 3.0e-58 229.2 156 73.1
Glyma.19G027800 Glycine max HOM05D006982 ORTHO05D008909 3.9e-58 228.8 154 70.8
VMungo0464G0061 Vigna mungo HOM05D006982 ORTHO05D008909 3.9e-58 228.8 153 70.6
MELO3C014935.2 Cucumis melo HOM05D006982 ORTHO05D008909 5.1e-58 228.4 152 71.7
Nitab4.5_0001637g0060 Nicotiana tabacum HOM05D006982 ORTHO05D008909 5.1e-58 228.4 157 69.4
Os03g0257000 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 6.7e-58 228.0 157 65.6
ClCG05G014130 Citrullus lanatus HOM05D006982 ORTHO05D008909 8.8e-58 227.6 152 69.7
PGR004G0184 Punica granatum HOM05D006982 ORTHO05D008909 8.8e-58 227.6 160 67.5
Os03g0209700 Oryza sativa ssp. japonica HOM05D006982 ORTHO05D008909 1.1e-57 227.3 155 67.7
Lsat_1_v5_gn_2_87800 Lactuca sativa HOM05D006982 ORTHO05D008909 2.0e-57 226.5 157 69.4
Lj2g0023544 Lotus japonicus HOM05D006982 ORTHO05D008909 2.0e-57 226.5 158 67.1
FAN09G4389 Fragaria x ananassa HOM05D006982 ORTHO05D008909 2.6e-57 226.1 156 69.2
SGA_v2.0_scaffold4G02409 Striga asiatica HOM05D006982 ORTHO05D008909 3.3e-57 225.7 156 65.4
Migut.H00650 Erythranthe guttata HOM05D006982 ORTHO05D008909 4.4e-57 225.3 156 70.5
Phvul.004G033900 Phaseolus vulgaris HOM05D006982 ORTHO05D008909 4.4e-57 225.3 153 69.9
Zm00001eb011170 Zea mays HOM05D006982 ORTHO05D008909 4.4e-57 225.3 152 68.4
BraA06t26915Z Brassica rapa HOM05D006982 ORTHO05D008909 5.7e-57 224.9 137 77.4
SalBow1G5236 Salvia bowleyana HOM05D006982 ORTHO05D008909 7.4e-57 224.6 155 67.1
TWI60G0050 Tripterygium wilfordii HOM05D006982 ORTHO05D008909 7.4e-57 224.6 159 70.4
CAN.G734.5 Capsicum annuum HOM05D006982 ORTHO05D008909 9.7e-57 224.2 155 68.4
AUR62042567 Chenopodium quinoa HOM05D006982 ORTHO05D008909 2.2e-56 223.0 153 68.6
Psat1g070160 Pisum sativum HOM05D006982 ORTHO05D008909 2.2e-56 223.0 157 66.9
ATR0064G116 Amborella trichopoda HOM05D006982 ORTHO05D008909 2.8e-56 222.6 167 68.3
FAN02G3418 Fragaria x ananassa HOM05D006982 ORTHO05D008909 2.8e-56 222.6 155 68.4
Eucgr.I01983 Eucalyptus grandis HOM05D006982 ORTHO05D008909 3.7e-56 222.2 160 65.0
HanXRQChr07g0199461 Helianthus annuus HOM05D006982 ORTHO05D008909 3.7e-56 222.2 149 70.5
Solyc03g013250.4 Solanum lycopersicum HOM05D006982 ORTHO05D008909 3.7e-56 222.2 155 66.5
TPR.G26172 Trifolium pratense HOM05D006982 ORTHO05D008909 4.8e-56 221.9 157 66.9
ECA238G0675 Erigeron canadensis HOM05D006982 ORTHO05D008909 1.1e-55 220.7 152 67.8
Sabra17G0079600 Salix brachista HOM05D006982 ORTHO05D008909 1.4e-55 220.3 203 53.7
Actinidia07827 Actinidia chinensis HOM05D006982 ORTHO05D008909 1.8e-55 219.9 136 73.5
Sopen03g016600 Solanum pennellii HOM05D006982 ORTHO05D008909 1.8e-55 219.9 155 65.8
Cpa.g.sc14.148 Carica papaya HOM05D006982 ORTHO05D008909 2.4e-55 219.5 138 73.9
Sed0004734 Sechium edule HOM05D006982 ORTHO05D008909 1.2e-54 217.2 158 65.8
EL10Ac2g03084 Beta vulgaris HOM05D006982 ORTHO05D008909 1.6e-54 216.9 159 66.7
Hund13166 Selenicereus undatus HOM05D006982 ORTHO05D008909 2.8e-48 196.1 150 64.7
Gohir.A09G011401 Gossypium hirsutum HOM05D006982 ORTHO05D008909 3.7e-48 195.7 186 57.0
CDE04G2259 Ceratophyllum demersum HOM05D006982 ORTHO05D008909 8.2e-48 194.5 127 70.1
SEGI_41437 Sequoiadendron giganteum HOM05D006982 ORTHO05D008909 4.1e-47 192.2 154 58.4
COL.COLO4_21380 Corchorus olitorius HOM05D006982 ORTHO05D008909 3.2e-44 182.6 119 73.1
Lj4A116T80 Lonicera japonica HOM05D006982 ORTHO05D008909 4.2e-44 182.2 119 73.9
BolC2t11598H Brassica oleracea HOM05D006982 ORTHO05D008909 2.3e-42 176.4 133 66.2
SMO164G0193 Selaginella moellendorffii HOM05D006982 ORTHO05D008909 3.0e-42 176.0 152 55.3
Ah.10g031970 Amaranthus hybridus HOM05D006982 ORTHO05D008909 1.3e-40 170.6 170 52.4
Peaxi162Scf00451g00425 Petunia axillaris HOM05D006982 ORTHO05D008909 1.4e-39 167.2 154 55.2
Medtr6g013815 Medicago truncatula HOM05D006982 ORTHO05D008909 1.8e-39 166.8 119 65.5
Pp3c21_18720 Physcomitrium patens HOM05D006982 ORTHO05D008909 9.1e-39 164.5 161 50.3
unitig_899.g15159 Utricularia gibba HOM05D006982 ORTHO05D008909 1.0e-37 161.0 155 55.5
arahy.Tifrunner.gnm1.ann1.84WVAW Arachis hypogaea HOM05D006982 ORTHO05D008909 3.4e-33 146.0 159 50.3
SHI03750 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-32 142.5 111 61.3
arahy.Tifrunner.gnm1.ann1.NGZQ86 Arachis hypogaea HOM05D006982 ORTHO05D008909 4.9e-32 142.1 159 48.4
C07p38170 Brassica napus HOM05D006982 ORTHO05D008909 2.0e-30 136.7 93 68.8
FAN05G3993 Fragaria x ananassa HOM05D006982 ORTHO05D008909 2.0e-30 136.7 89 76.4
CSS0035536 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 6.1e-27 125.2 76 75.0
C02p55410 Brassica napus HOM05D006982 ORTHO05D008909 8.9e-26 121.3 114 57.9
TPR.G3955 Trifolium pratense HOM05D006982 ORTHO05D008909 2.3e-18 96.7 57 78.9
AUR62018155 Chenopodium quinoa HOM05D006982 ORTHO05D008909 1.8e-10 70.5 50 64.0
CSS0038093 Camellia sinensis var. sinensis HOM05D006982 ORTHO05D008909 9.8e-09 64.7 34 82.4
Lj4A116T81 Lonicera japonica HOM05D006982 ORTHO05D008909 3.2e-07 59.7 36 69.4
SHI03749 Sapria himalayana HOM05D006982 ORTHO05D000001 3.2e-07 59.7 34 70.6
AUR62006323 Chenopodium quinoa HOM05D003441 ORTHO05D044017 4.1e-07 59.3 63 49.2
PGSC0003DMG400033554 Solanum tuberosum HOM05D006982 ORTHO05D008909 1.2e-06 57.8 43 60.5
Medtr6g013805 Medicago truncatula HOM05D006982 ORTHO05D008909 6.0e-06 55.5 33 78.8


User provided reference genes

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