Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1394 Papaver somniferum HOM05D006138 ORTHO05D007778 9.2e-240 833.2 429 100.0
PSO063G4547 Papaver somniferum HOM05D006138 ORTHO05D007778 1.9e-197 692.6 393 91.6
TAR362G0162 Trochodendron aralioides HOM05D006138 ORTHO05D007778 1.9e-120 436.8 416 56.2
Nn1g07955 Nelumbo nucifera HOM05D006138 ORTHO05D007778 5.4e-115 418.7 420 55.2
Dinv27208 Davidia involucrata HOM05D006138 ORTHO05D007778 2.6e-109 399.8 420 51.9
Thecc.04G198400 Theobroma cacao HOM05D006138 ORTHO05D007778 1.6e-103 380.6 417 48.0
GSVIVG01020999001 Vitis vinifera HOM05D006138 ORTHO05D007778 2.6e-101 373.2 416 48.8
Atru.chr4.1604 Acer truncatum HOM05D006138 ORTHO05D007778 2.3e-97 360.1 385 49.9
Gorai.009G350500 Gossypium raimondii HOM05D006138 ORTHO05D007778 6.6e-97 358.6 418 48.6
Gohir.A05G323100 Gossypium hirsutum HOM05D006138 ORTHO05D007778 8.7e-97 358.2 423 48.0
vmacro15557 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 1.3e-95 354.4 428 47.4
Gohir.D05G326000 Gossypium hirsutum HOM05D006138 ORTHO05D007778 4.8e-95 352.4 418 48.1
Cpa.g.sc83.29 Carica papaya HOM05D006138 ORTHO05D007778 6.2e-95 352.1 423 47.8
CiPaw.02G065100 Carya illinoinensis HOM05D006138 ORTHO05D007778 4.5e-93 345.9 419 46.5
Cfa014952 Carpinus fangiana HOM05D006138 ORTHO05D007778 8.4e-92 341.7 417 47.5
Potri.001G317900 Populus trichocarpa HOM05D006138 ORTHO05D007778 1.1e-91 341.3 424 45.0
TWI09G0334 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 1.4e-91 340.9 422 46.0
Actinidia38756 Actinidia chinensis HOM05D006138 ORTHO05D007778 7.1e-91 338.6 418 47.8
Lj6A392G25 Lonicera japonica HOM05D006138 ORTHO05D007778 4.6e-90 335.9 455 43.1
Nitab4.5_0000401g0220 Nicotiana tabacum HOM05D006138 ORTHO05D007778 7.9e-90 335.1 418 43.8
TWI53G0419 Tripterygium wilfordii HOM05D006138 ORTHO05D007778 1.3e-87 327.8 415 45.1
AL3G38900 Arabidopsis lyrata HOM05D006138 ORTHO05D007778 1.6e-87 327.4 411 44.0
Carub.0003s2421 Capsella rubella HOM05D006138 ORTHO05D007778 1.6e-87 327.4 413 43.6
Oeu025031.1 Olea europaea HOM05D006138 ORTHO05D007778 2.8e-87 326.6 428 44.2
Sc13g0000300 Simmondsia chinensis HOM05D006138 ORTHO05D007778 4.8e-87 325.9 415 44.8
COL.COLO4_20197 Corchorus olitorius HOM05D006138 ORTHO05D007778 8.1e-87 325.1 418 45.9
Manes.15G055900 Manihot esculenta HOM05D006138 ORTHO05D007778 1.8e-86 323.9 368 48.6
Peaxi162Scf00047g00230 Petunia axillaris HOM05D006138 ORTHO05D007778 4.0e-86 322.8 413 43.1
Cc03_g08330 Coffea canephora HOM05D006138 ORTHO05D007778 5.3e-86 322.4 425 44.0
AT3G23910 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 5.8e-85 318.9 413 42.4
Lj6A407G21 Lonicera japonica HOM05D006138 ORTHO05D007778 2.9e-84 316.6 455 41.5
Rhsim02G0060900 Rhododendron simsii HOM05D006138 ORTHO05D007778 2.9e-84 316.6 562 36.5
Sp3g21610 Schrenkiella parvula HOM05D006138 ORTHO05D007778 1.1e-83 314.7 412 41.7
CsaV3_3G010820 Cucumis sativus L. HOM05D006138 ORTHO05D007778 2.5e-83 313.5 419 45.6
Lsat_1_v5_gn_6_60661 Lactuca sativa HOM05D006138 ORTHO05D007778 3.2e-83 313.2 413 43.3
CANSAT78G1344 Cannabis sativa HOM05D006138 ORTHO05D007778 1.6e-82 310.8 416 41.8
CANSAT78G2425 Cannabis sativa HOM05D006138 ORTHO05D007778 2.1e-82 310.5 416 41.8
Sed0019269 Sechium edule HOM05D006138 ORTHO05D007778 3.5e-82 309.7 416 44.0
MD04G1014100 Malus domestica HOM05D006138 ORTHO05D007778 6.0e-82 308.9 418 43.3
THA.LOC104804805 Tarenaya hassleriana HOM05D006138 ORTHO05D007778 3.0e-81 306.6 406 41.9
Nitab4.5_0003101g0010 Nicotiana tabacum HOM05D006138 ORTHO05D007778 3.9e-81 306.2 417 42.2
RhsimUnG0035600 Rhododendron simsii HOM05D006138 ORTHO05D007778 8.7e-81 305.1 546 36.8
ClCG05G003180 Citrullus lanatus HOM05D006138 ORTHO05D007778 1.3e-79 301.2 413 43.1
DCAR_026640 Daucus carota HOM05D006138 ORTHO05D007778 2.8e-79 300.1 412 43.2
CAN.G1565.12 Capsicum annuum HOM05D006138 ORTHO05D007778 4.8e-79 299.3 365 44.9
vmacro15559 Vaccinium macrocarpon HOM05D006138 ORTHO05D007778 8.2e-79 298.5 443 40.2
C07p13230 Brassica napus HOM05D006138 ORTHO05D007778 1.8e-78 297.4 418 39.7
AT3G24255 Arabidopsis thaliana HOM05D006138 ORTHO05D007778 4.0e-78 296.2 420 39.8
MSTRG.9735 Avicennia marina HOM05D006138 ORTHO05D007778 4.0e-78 296.2 417 42.4
A07p08490 Brassica napus HOM05D006138 ORTHO05D007778 4.0e-78 296.2 418 39.5
Sopen09g035050 Solanum pennellii HOM05D006138 ORTHO05D007778 5.3e-78 295.8 408 41.4
BcaC06g35587 Brassica carinata HOM05D006138 ORTHO05D007778 1.2e-77 294.7 418 39.5
Migut.G00745 Erythranthe guttata HOM05D006138 ORTHO05D007778 1.2e-77 294.7 411 43.8
Solyc09g092180.3 Solanum lycopersicum HOM05D006138 ORTHO05D007778 1.2e-77 294.7 408 41.2
Aa31LG8G10490 Aethionema arabicum HOM05D006138 ORTHO05D007778 2.6e-77 293.5 427 39.3
CDE05G2116 Ceratophyllum demersum HOM05D006138 ORTHO05D007778 3.4e-77 293.1 355 47.0
SalBow8G0822 Salvia bowleyana HOM05D006138 ORTHO05D007778 4.5e-77 292.7 443 42.0
BcaB06g26554 Brassica carinata HOM05D006138 ORTHO05D007778 5.8e-77 292.4 418 40.7
SalBow8G2056 Salvia bowleyana HOM05D006138 ORTHO05D007778 5.8e-77 292.4 443 42.0
Aqoxy2G04005 Aquilegia oxysepala HOM05D006138 ORTHO05D007778 1.7e-76 290.8 409 44.5
Sabra16G0201200 Salix brachista HOM05D006138 ORTHO05D007778 2.9e-76 290.0 523 36.9
BraA07t28634Z Brassica rapa HOM05D006138 ORTHO05D007778 1.9e-75 287.3 425 39.1
PGSC0003DMG400026422 Solanum tuberosum HOM05D006138 ORTHO05D007778 3.2e-75 286.6 365 42.7
QL10p052654 Quercus lobata HOM05D006138 ORTHO05D007778 1.2e-74 284.6 540 37.0
BolC7t41815H Brassica oleracea HOM05D006138 ORTHO05D007778 1.6e-74 284.3 425 38.6
Thhalv10002763m.g Eutrema salsugineum HOM05D006138 ORTHO05D007778 3.5e-74 283.1 347 43.8
HanXRQChr07g0185891 Helianthus annuus HOM05D006138 ORTHO05D007778 6.1e-74 282.3 411 40.6
PGR004G2157 Punica granatum HOM05D006138 ORTHO05D007778 6.1e-74 282.3 407 41.5
Eucgr.H00039 Eucalyptus grandis HOM05D006138 ORTHO05D007778 2.3e-73 280.4 384 43.0
Aqoxy360s001 Aquilegia oxysepala HOM05D006138 ORTHO05D007778 1.1e-72 278.1 360 45.6
Ca_16395_v3 Cicer arietinum L. HOM05D006138 ORTHO05D007778 9.7e-72 275.0 403 39.5
SGA_v2.0_scaffold19G08768 Striga asiatica HOM05D006138 ORTHO05D007778 4.8e-71 272.7 416 40.1
AUR62020846 Chenopodium quinoa HOM05D006138 ORTHO05D007778 2.4e-70 270.4 384 40.9
Lj6g0009885 Lotus japonicus HOM05D006138 ORTHO05D007778 6.9e-70 268.9 417 38.8
CSS0015025 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 1.5e-69 267.7 255 54.9
CSS0014339 Camellia sinensis var. sinensis HOM05D006138 ORTHO05D007778 2.6e-69 266.9 255 54.1
VMungo1383G1063 Vigna mungo HOM05D000127 ORTHO05D000243 4.2e-67 259.6 410 37.3
ECA233G3278 Erigeron canadensis HOM05D006138 ORTHO05D007778 1.2e-66 258.1 387 39.0
Glyma.11G255500 Glycine max HOM05D006138 ORTHO05D007778 1.6e-66 257.7 355 41.1
Phvul.001G267400 Phaseolus vulgaris HOM05D006138 ORTHO05D007778 3.7e-63 246.5 400 38.0
Psat5g102360 Pisum sativum HOM05D006138 ORTHO05D007778 3.1e-62 243.4 402 35.3
Eucgr.L02926 Eucalyptus grandis HOM05D006138 ORTHO05D007778 4.1e-62 243.0 385 39.2
Ah.04g149320 Amaranthus hybridus HOM05D006138 ORTHO05D007778 5.3e-62 242.7 407 37.1
Lalb_Chr23g0278421 Lupinus albus HOM05D006138 ORTHO05D007778 1.8e-57 227.6 349 39.3
HPP92_023190 Vanilla planifolia HOM05D006138 ORTHO05D007778 2.3e-57 227.3 414 35.7
arahy.Tifrunner.gnm1.ann1.3M33GA Arachis hypogaea HOM05D006138 ORTHO05D007778 2.0e-56 224.2 398 36.2
arahy.Tifrunner.gnm1.ann1.HYZ2KB Arachis hypogaea HOM05D006138 ORTHO05D007778 2.8e-55 220.3 398 35.4
AUR62018570 Chenopodium quinoa HOM05D006138 ORTHO05D007778 3.7e-55 219.9 377 37.1
Os04g0379800 Oryza sativa ssp. japonica HOM05D006138 ORTHO05D007778 7.7e-53 212.2 414 34.1
Gohir.A12G078622 Gossypium hirsutum HOM05D006138 ORTHO05D007778 9.4e-51 205.3 289 43.3
EL10Ac3g07466 Beta vulgaris HOM05D006138 ORTHO05D007778 1.0e-49 201.8 389 34.7
Glyma.18G001700 Glycine max HOM05D006138 ORTHO05D007778 2.6e-48 197.2 219 45.7
TPR.G24162 Trifolium pratense HOM05D006138 ORTHO05D007778 5.0e-44 183.0 236 41.9
Ciclev10005758m.g Citrus clementina HOM05D006138 ORTHO05D007778 4.7e-42 176.4 170 52.4
Haze_11642 Corylus avellana HOM05D006138 ORTHO05D007778 1.0e-41 175.3 382 35.3
unitig_37.g12032 Utricularia gibba HOM05D006138 ORTHO05D007778 4.0e-41 173.3 345 33.9
Hma1.2p1_0017F.1_g011170 Hydrangea macrophylla HOM05D006138 ORTHO05D007778 7.5e-40 169.1 259 42.9
RcHm_v2.0_Chr4g0414021 Rosa chinensis HOM05D006138 ORTHO05D007778 1.4e-38 164.9 309 38.8
FvH4_4g13460 Fragaria vesca HOM05D006138 ORTHO05D007778 1.7e-36 157.9 305 35.7
FAN12G1205 Fragaria x ananassa HOM05D006138 ORTHO05D007778 1.5e-35 154.8 304 35.5
Gohir.D12G210200 Gossypium hirsutum HOM05D006138 ORTHO05D007778 2.5e-35 154.1 233 43.3
Oeu025032.1 Olea europaea HOM05D006138 ORTHO05D007778 2.5e-35 154.1 139 55.4
FAN22G1553 Fragaria x ananassa HOM05D006138 ORTHO05D007778 9.4e-35 152.1 306 36.3
Prupe.1G161100 Prunus persica HOM05D006138 ORTHO05D007778 1.4e-33 148.3 274 37.6
Duzib268G1255 Durio zibethinus HOM05D006138 ORTHO05D007778 2.3e-33 147.5 127 56.7
Hund24401 Selenicereus undatus HOM05D006138 ORTHO05D007778 2.0e-32 144.4 260 37.3
MELO3C006299.2 Cucumis melo HOM05D006138 ORTHO05D007778 5.7e-32 142.9 262 40.1
Zm00001eb085830 Zea mays HOM05D006138 ORTHO05D007778 9.5e-27 125.6 422 26.3
Nn1g00061 Nelumbo nucifera HOM05D006138 ORTHO05D007778 4.4e-24 116.7 165 46.1
FAN07G2199 Fragaria x ananassa HOM05D006138 ORTHO05D007778 8.6e-20 102.4 241 32.4
RcHm_v2.0_Chr4g0414071 Rosa chinensis HOM05D006138 ORTHO05D007778 1.9e-19 101.3 134 47.0
Actinidia16488 Actinidia chinensis HOM05D006138 ORTHO05D007778 1.4e-17 95.1 86 53.5
Nitab4.5_0001652g0120 Nicotiana tabacum HOM05D006138 ORTHO05D007778 2.3e-17 94.4 239 31.8
Pp3c12_25780 Physcomitrium patens HOM05D058747 ORTHO05D007778 3.5e-13 80.5 260 24.2
Hund29337 Selenicereus undatus HOM05D006138 ORTHO05D007778 1.7e-12 78.2 123 38.2
Hund29338 Selenicereus undatus HOM05D006138 ORTHO05D007778 1.7e-12 78.2 123 38.2
Duzib268G0476 Durio zibethinus HOM05D006138 ORTHO05D007778 4.3e-11 73.6 160 35.0
Phvul.001G135400 Phaseolus vulgaris HOM05D006138 ORTHO05D007778 5.6e-11 73.2 106 36.8
Pp3c4_4010 Physcomitrium patens HOM05D058747 ORTHO05D007778 1.6e-10 71.6 269 24.5
Duzib268G0147 Durio zibethinus HOM05D006138 ORTHO05D007778 3.1e-09 67.4 129 38.0
SHI01022 Sapria himalayana HOM05D006138 ORTHO05D007778 2.2e-07 61.2 118 33.1


User provided reference genes

Program Settings