Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1362 Papaver somniferum HOM05D000347 ORTHO05D008062 5.3e-126 454.5 255 100.0
PSO063G6109 Papaver somniferum HOM05D000347 ORTHO05D008062 3.5e-101 372.1 255 85.5
Ciclev10021356m.g Citrus clementina HOM05D000347 ORTHO05D008062 6.5e-15 85.5 226 35.8
Glyma.08G356200 Glycine max HOM05D000347 ORTHO05D008062 6.5e-15 85.5 232 38.8
Glyma.18G173300 Glycine max HOM05D000347 ORTHO05D008062 4.2e-14 82.8 232 37.5
QL09p044668 Quercus lobata HOM05D000347 ORTHO05D008062 4.2e-14 82.8 225 35.6
TAR636G2566 Trochodendron aralioides HOM05D000347 ORTHO05D008062 5.5e-14 82.4 224 40.2
Dinv19218 Davidia involucrata HOM05D000347 ORTHO05D008062 1.2e-13 81.3 234 36.8
VMungo1383G0854 Vigna mungo HOM05D000347 ORTHO05D008062 2.1e-13 80.5 233 35.6
Phvul.008G123300 Phaseolus vulgaris HOM05D000347 ORTHO05D008062 4.6e-13 79.3 228 37.3
Thecc.01G228300 Theobroma cacao HOM05D000347 ORTHO05D008062 6.0e-13 79.0 226 37.2
Manes.12G042000 Manihot esculenta HOM05D000347 ORTHO05D008062 1.3e-12 77.8 226 35.0
PGR083G0949 Punica granatum HOM05D000347 ORTHO05D008062 1.3e-12 77.8 151 47.0
Cc01_g17250 Coffea canephora HOM05D000347 ORTHO05D008062 2.3e-12 77.0 229 35.4
Migut.D00520 Erythranthe guttata HOM05D000347 ORTHO05D008062 2.3e-12 77.0 229 35.4
CANSAT01G0926 Cannabis sativa HOM05D000347 ORTHO05D008062 3.9e-12 76.3 227 35.7
Nn1g07779 Nelumbo nucifera HOM05D000347 ORTHO05D008062 3.9e-12 76.3 227 36.1
GSVIVG01028561001 Vitis vinifera HOM05D000347 ORTHO05D008062 3.9e-12 76.3 227 35.2
TWI18G0408 Tripterygium wilfordii HOM05D000347 ORTHO05D008062 6.7e-12 75.5 242 35.1
TAR365G0021 Trochodendron aralioides HOM05D000347 ORTHO05D008062 1.1e-11 74.7 143 43.4
CiPaw.04G106800 Carya illinoinensis HOM05D000347 ORTHO05D000694 1.5e-11 74.3 226 36.3
Prupe.8G205000 Prunus persica HOM05D000347 ORTHO05D000694 1.9e-11 73.9 227 35.2
Aqoxy2G03776 Aquilegia oxysepala HOM05D000347 ORTHO05D008062 2.5e-11 73.6 226 34.1
CSS0034279 Camellia sinensis var. sinensis HOM05D000347 ORTHO05D008062 3.3e-11 73.2 230 34.8
TAR365G1261 Trochodendron aralioides HOM05D000347 ORTHO05D008062 1.3e-10 71.2 230 35.2
CiPaw.03G151400 Carya illinoinensis HOM05D000347 ORTHO05D008062 2.1e-10 70.5 185 38.9
Solyc09g061715.1 Solanum lycopersicum HOM05D000347 ORTHO05D008062 2.8e-10 70.1 242 34.3
Sopen09g024710 Solanum pennellii HOM05D000347 ORTHO05D008062 2.8e-10 70.1 242 34.3
Actinidia37581 Actinidia chinensis HOM05D000347 ORTHO05D008062 3.7e-10 69.7 227 35.2
Medtr7g059080 Medicago truncatula HOM05D000347 ORTHO05D008062 3.7e-10 69.7 231 36.4
Lsat_1_v5_gn_5_179760 Lactuca sativa HOM05D000347 ORTHO05D008062 6.3e-10 68.9 185 34.1
Medtr0027s0180 Medicago truncatula HOM05D000347 ORTHO05D008062 6.3e-10 68.9 242 35.1
TPR.G15284 Trifolium pratense HOM05D000347 ORTHO05D008062 6.3e-10 68.9 203 37.4
Eucgr.H00807 Eucalyptus grandis HOM05D000347 ORTHO05D008062 8.2e-10 68.6 233 35.2
HanXRQChr01g0014681 Helianthus annuus HOM05D000347 ORTHO05D008062 8.2e-10 68.6 227 33.5
Potri.002G240300 Populus trichocarpa HOM05D000347 ORTHO05D008062 1.4e-09 67.8 226 35.4
SGA_v2.0_scaffold1G00715 Striga asiatica HOM05D000347 ORTHO05D008062 1.8e-09 67.4 234 35.5
Lj1g0023077 Lotus japonicus HOM05D000347 ORTHO05D008062 4.1e-09 66.2 227 34.8
Cpa.g.sc8.175 Carica papaya HOM05D000347 ORTHO05D008062 5.3e-09 65.9 226 33.6
Ca_07542_v3 Cicer arietinum L. HOM05D000347 ORTHO05D008062 9.0e-09 65.1 229 34.1
Gohir.A11G136100 Gossypium hirsutum HOM05D000347 ORTHO05D008062 9.0e-09 65.1 205 33.7
Gohir.D11G142500 Gossypium hirsutum HOM05D000347 ORTHO05D008062 9.0e-09 65.1 205 33.7
Gorai.007G152800 Gossypium raimondii HOM05D000347 ORTHO05D008062 9.0e-09 65.1 205 33.7
Solyc06g083560.3 Solanum lycopersicum HOM05D000347 ORTHO05D008062 9.0e-09 65.1 222 31.1
PGSC0003DMG400003422 Solanum tuberosum HOM05D000347 ORTHO05D008062 1.2e-08 64.7 193 36.3
MD05G1178500 Malus domestica HOM05D000347 ORTHO05D008062 1.5e-08 64.3 227 31.3
RcHm_v2.0_Chr6g0285151 Rosa chinensis HOM05D000347 ORTHO05D008062 2.0e-08 63.9 225 32.0
MELO3C018065.2 Cucumis melo HOM05D000347 ORTHO05D008062 3.4e-08 63.2 227 35.2
Nitab4.5_0000866g0010 Nicotiana tabacum HOM05D000347 ORTHO05D008062 4.5e-08 62.8 164 39.0
FAN27G2014 Fragaria x ananassa HOM05D000347 ORTHO05D008062 7.6e-08 62.0 143 41.3
FvH4_2g19360 Fragaria vesca HOM05D000347 ORTHO05D008062 1.0e-07 61.6 139 41.0
Rhsim13G0044000 Rhododendron simsii HOM05D000347 ORTHO05D008062 1.3e-07 61.2 227 35.7
FAN15G1475 Fragaria x ananassa HOM05D000347 ORTHO05D000694 1.7e-07 60.8 145 38.6
FAN24G2098 Fragaria x ananassa HOM05D000347 ORTHO05D000694 1.7e-07 60.8 143 40.6
Actinidia23733 Actinidia chinensis HOM05D000347 ORTHO05D008062 2.2e-07 60.5 232 32.8
Actinidia30090 Actinidia chinensis HOM05D000347 ORTHO05D008062 2.9e-07 60.1 185 36.2
Sabra02G0183100 Salix brachista HOM05D000347 ORTHO05D008062 2.9e-07 60.1 156 39.1
SalBow4G1846 Salvia bowleyana HOM05D000347 ORTHO05D008062 2.9e-07 60.1 174 39.1
Sopen06g034940 Solanum pennellii HOM05D000347 ORTHO05D008062 3.8e-07 59.7 222 29.3
MD10G1166700 Malus domestica HOM05D000347 ORTHO05D008062 5.0e-07 59.3 179 34.6
arahy.Tifrunner.gnm1.ann1.54FW37 Arachis hypogaea HOM05D000347 ORTHO05D008062 6.5e-07 58.9 227 28.2
Psat3g142320 Pisum sativum HOM05D000347 ORTHO05D008062 6.5e-07 58.9 187 38.0
Oeu018505.1 Olea europaea HOM05D000879 ORTHO05D002043 8.4e-07 58.5 139 38.8
arahy.Tifrunner.gnm1.ann1.W0YDFD Arachis hypogaea HOM05D000347 ORTHO05D008062 1.1e-06 58.2 227 30.0
Lalb_Chr03g0041901 Lupinus albus HOM05D000347 ORTHO05D008062 1.4e-06 57.8 185 34.1
ClCG07G001810 Citrullus lanatus HOM05D006129 ORTHO05D007446 1.9e-06 57.4 155 37.4
Hma1.2p1_0351F.1_g132820 Hydrangea macrophylla HOM05D000347 ORTHO05D008062 5.5e-06 55.8 205 32.2


User provided reference genes

Program Settings