Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1338 Papaver somniferum HOM05D005922 ORTHO05D006934 1.9e-239 832.0 403 100.0
PSO478G3575 Papaver somniferum HOM05D005922 ORTHO05D006934 1.1e-223 779.6 403 92.3
Aqoxy3G04113 Aquilegia oxysepala HOM05D005922 ORTHO05D006934 6.6e-155 551.2 401 68.1
TAR622G0311 Trochodendron aralioides HOM05D005922 ORTHO05D006934 1.2e-151 540.4 392 67.1
Nn4g24501 Nelumbo nucifera HOM05D005922 ORTHO05D006934 1.8e-149 533.1 394 68.0
MD16G1013700 Malus domestica HOM05D005922 ORTHO05D006934 3.5e-140 502.3 402 63.9
Manes.17G088400 Manihot esculenta HOM05D005922 ORTHO05D006934 5.2e-136 488.4 386 64.0
RcHm_v2.0_Chr4g0442081 Rosa chinensis HOM05D005922 ORTHO05D006934 5.2e-136 488.4 396 63.1
Rhsim09G0086000 Rhododendron simsii HOM05D005922 ORTHO05D006934 1.3e-134 483.8 400 61.0
Lj3A860T49 Lonicera japonica HOM05D005922 ORTHO05D006934 7.1e-133 478.0 396 61.1
QL03p038994 Quercus lobata HOM05D005922 ORTHO05D006934 7.1e-133 478.0 400 62.0
TWI74G0639 Tripterygium wilfordii HOM05D005922 ORTHO05D006934 7.1e-133 478.0 398 61.1
Actinidia20108 Actinidia chinensis HOM05D005922 ORTHO05D006934 2.1e-132 476.5 395 61.3
FAN07G1633 Fragaria x ananassa HOM05D005922 ORTHO05D006934 2.7e-132 476.1 401 61.1
FvH4_4g33040 Fragaria vesca HOM05D005922 ORTHO05D006934 6.0e-132 474.9 398 61.6
FAN17G1819 Fragaria x ananassa HOM05D005922 ORTHO05D006934 1.0e-131 474.2 398 61.3
FAN12G4156 Fragaria x ananassa HOM05D005922 ORTHO05D006934 1.3e-131 473.8 398 61.3
CSS0049283 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 6.6e-131 471.5 396 60.9
CiPaw.06G059000 Carya illinoinensis HOM05D005922 ORTHO05D006934 6.6e-131 471.5 396 62.6
FAN22G1644 Fragaria x ananassa HOM05D005922 ORTHO05D006934 3.3e-130 469.2 405 61.2
Solyc01g005100.4 Solanum lycopersicum HOM05D005922 ORTHO05D006934 5.6e-130 468.4 400 57.2
Sopen01g001120 Solanum pennellii HOM05D005922 ORTHO05D006934 9.5e-130 467.6 406 56.7
CAN.G282.103 Capsicum annuum HOM05D005922 ORTHO05D006934 8.1e-129 464.5 400 58.0
Ciclev10015473m.g Citrus clementina HOM05D005922 ORTHO05D006934 1.8e-128 463.4 397 59.7
Lalb_Chr13g0293631 Lupinus albus HOM05D005922 ORTHO05D006934 1.8e-128 463.4 402 60.0
PGSC0003DMG400022790 Solanum tuberosum HOM05D005922 ORTHO05D006934 1.5e-127 460.3 404 56.4
Cc11_g05840 Coffea canephora HOM05D005922 ORTHO05D006934 2.0e-127 459.9 399 58.6
MBI19_g25220_MAGBIO Magnolia biondii HOM05D005922 ORTHO05D006934 4.9e-126 455.3 395 60.0
Lj4g0028223 Lotus japonicus HOM05D005922 ORTHO05D006934 1.1e-125 454.1 394 58.6
Eucgr.B02658 Eucalyptus grandis HOM05D005922 ORTHO05D006934 1.4e-125 453.8 401 57.9
TPR.G5128 Trifolium pratense HOM05D005922 ORTHO05D006934 2.4e-125 453.0 396 58.1
Phvul.002G181600 Phaseolus vulgaris HOM05D005922 ORTHO05D006934 2.7e-124 449.5 394 58.4
GSVIVG01011600001 Vitis vinifera HOM05D005922 ORTHO05D006934 3.5e-124 449.1 400 57.5
arahy.Tifrunner.gnm1.ann1.DV72QU Arachis hypogaea HOM05D005922 ORTHO05D006934 7.8e-124 448.0 400 57.2
Glyma.08G093700 Glycine max HOM05D005922 ORTHO05D006934 2.3e-123 446.4 394 59.1
Thhalv10018688m.g Eutrema salsugineum HOM05D005922 ORTHO05D006934 3.0e-123 446.0 399 57.9
MSTRG.418 Avicennia marina HOM05D005922 ORTHO05D006934 3.9e-123 445.7 397 58.7
Prupe.1G337400 Prunus persica HOM05D005922 ORTHO05D006934 3.9e-123 445.7 398 57.3
Gorai.012G183700 Gossypium raimondii HOM05D005922 ORTHO05D006934 6.6e-123 444.9 401 56.9
HanXRQChr17g0566161 Helianthus annuus HOM05D005922 ORTHO05D006934 6.6e-123 444.9 399 58.1
Potri.008G139000 Populus trichocarpa HOM05D005922 ORTHO05D006934 8.6e-123 444.5 384 61.5
EL10Ac6g14554 Beta vulgaris HOM05D005922 ORTHO05D006934 5.6e-122 441.8 400 55.0
ECA234G0994 Erigeron canadensis HOM05D005922 ORTHO05D006934 7.3e-122 441.4 376 59.6
Ca_11580_v3 Cicer arietinum L. HOM05D005922 ORTHO05D006934 2.8e-121 439.5 401 56.1
AL2G26830 Arabidopsis lyrata HOM05D005922 ORTHO05D006934 4.7e-121 438.7 401 56.9
BcaB03g15398 Brassica carinata HOM05D005922 ORTHO05D006934 6.2e-121 438.3 395 57.5
Sc10g0003730 Simmondsia chinensis HOM05D005922 ORTHO05D006934 1.8e-120 436.8 382 58.4
Lsat_1_v5_gn_4_23861 Lactuca sativa HOM05D005922 ORTHO05D006934 2.0e-119 433.3 396 57.8
Migut.L00620 Erythranthe guttata HOM05D005922 ORTHO05D006934 3.4e-119 432.6 394 56.1
Carub.0002s1456 Capsella rubella HOM05D005922 ORTHO05D006934 1.3e-118 430.6 400 56.5
AUR62002964 Chenopodium quinoa HOM05D005922 ORTHO05D006934 1.7e-118 430.3 397 53.1
Psat7g084400 Pisum sativum HOM05D005922 ORTHO05D006934 2.2e-118 429.9 401 55.4
C06p37940 Brassica napus HOM05D005922 ORTHO05D006934 1.1e-117 427.6 394 57.1
PGR102G1589 Punica granatum HOM05D005922 ORTHO05D006934 1.9e-117 426.8 407 55.8
AUR62007770 Chenopodium quinoa HOM05D005922 ORTHO05D006934 7.1e-117 424.9 402 53.5
BraA07t30847Z Brassica rapa HOM05D005922 ORTHO05D006934 9.3e-117 424.5 394 56.9
BcaC08g45999 Brassica carinata HOM05D005922 ORTHO05D006934 4.6e-116 422.2 394 56.3
BolC6t38893H Brassica oleracea HOM05D005922 ORTHO05D006934 4.6e-116 422.2 394 56.3
A07p32170 Brassica napus HOM05D005922 ORTHO05D006934 6.0e-116 421.8 394 56.6
Sabra08G0105600 Salix brachista HOM05D005922 ORTHO05D006934 1.3e-115 420.6 415 54.7
Sed0026869 Sechium edule HOM05D005922 ORTHO05D006934 1.3e-115 420.6 400 55.8
THA.LOC104809799 Tarenaya hassleriana HOM05D005922 ORTHO05D006934 1.1e-114 417.5 384 57.0
ATR0598G299 Amborella trichopoda HOM05D005922 ORTHO05D006934 1.5e-114 417.2 396 54.0
CSS0037760 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 7.3e-114 414.8 395 56.5
Duzib248G0719 Durio zibethinus HOM05D005922 ORTHO05D006934 3.6e-113 412.5 396 54.8
MELO3C020028.2 Cucumis melo HOM05D005922 ORTHO05D006934 1.1e-112 411.0 409 54.3
Hund05787 Selenicereus undatus HOM05D005922 ORTHO05D006934 3.1e-112 409.5 435 49.9
Dinv14365 Davidia involucrata HOM05D001297 ORTHO05D001135 5.3e-112 408.7 386 55.7
CsaV3_5G013220 Cucumis sativus L. HOM05D005922 ORTHO05D006934 2.0e-111 406.8 400 53.8
DCAR_026820 Daucus carota HOM05D005922 ORTHO05D006934 7.6e-111 404.8 378 56.9
Aa31LG10G3720 Aethionema arabicum HOM05D005922 ORTHO05D006934 1.3e-110 404.1 376 56.4
Gohir.D04G188200 Gossypium hirsutum HOM05D005922 ORTHO05D006934 1.7e-110 403.7 303 65.0
Sp5g23080 Schrenkiella parvula HOM05D005922 ORTHO05D006934 3.5e-108 396.0 347 59.9
Nitab4.5_0000521g0110 Nicotiana tabacum HOM05D005922 ORTHO05D006934 4.6e-108 395.6 457 47.3
ClCG11G001170 Citrullus lanatus HOM05D005922 ORTHO05D006934 1.0e-107 394.4 400 53.8
CDE05G0039 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 1.8e-107 393.7 396 54.3
unitig_748.g7591 Utricularia gibba HOM05D005922 ORTHO05D006934 1.8e-107 393.7 393 53.7
Gohir.A04G143900 Gossypium hirsutum HOM05D005922 ORTHO05D006934 2.3e-107 393.3 329 60.2
SHI04278 Sapria himalayana HOM05D005922 ORTHO05D006934 1.1e-104 384.4 401 52.6
SGA_v2.0_scaffold57G20105 Striga asiatica HOM05D005922 ORTHO05D006934 2.4e-104 383.3 405 50.9
Nitab4.5_0001935g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 2.2e-102 376.7 419 48.0
Os03g0238700 Oryza sativa ssp. japonica HOM05D005922 ORTHO05D006934 1.9e-98 363.6 292 59.2
CANSAT78G1412 Cannabis sativa HOM05D005922 ORTHO05D006934 2.1e-97 360.1 401 50.6
Haze_10819 Corylus avellana HOM05D005922 ORTHO05D006934 2.8e-89 333.2 241 68.9
BcaC08g45997 Brassica carinata HOM05D005922 ORTHO05D006934 3.4e-87 326.2 323 52.3
Glyma.05G138500 Glycine max HOM05D005922 ORTHO05D006934 7.6e-87 325.1 286 60.8
Cpa.g.sc2.132 Carica papaya HOM05D005922 ORTHO05D006934 8.5e-86 321.6 336 51.8
COL.COLO4_27589 Corchorus olitorius HOM05D005922 ORTHO05D006934 4.2e-85 319.3 343 49.9
Ah.03g138110 Amaranthus hybridus HOM05D005922 ORTHO05D006934 5.7e-82 308.9 397 43.3
Pp3c27_7680 Physcomitrium patens HOM05D005922 ORTHO05D006934 1.4e-80 304.3 467 38.5
SalBow7G4797 Salvia bowleyana HOM05D005922 ORTHO05D006934 1.8e-80 303.9 419 44.9
AT1G68080 Arabidopsis thaliana HOM05D005922 ORTHO05D006934 9.1e-80 301.6 340 49.1
Cfa015069 Carpinus fangiana HOM05D005922 ORTHO05D006934 2.1e-76 290.4 397 42.8
AagrBONN_evm.TU.Sc2ySwM_117.2043 Anthoceros agrestis HOM05D005922 ORTHO05D006934 3.0e-75 286.6 318 50.9
Atru.chr11.736 Acer truncatum HOM05D005922 ORTHO05D006934 5.7e-74 282.3 399 40.9
arahy.Tifrunner.gnm1.ann1.F0VD4J Arachis hypogaea HOM05D005922 ORTHO05D006934 1.2e-71 274.6 290 51.7
Nitab4.5_0001294g0040 Nicotiana tabacum HOM05D005922 ORTHO05D006934 1.0e-62 245.0 182 61.0
Peaxi162Scf01111g00310 Petunia axillaris HOM05D005922 ORTHO05D006934 5.5e-61 239.2 306 45.1
CARHR060740 Cardamine hirsuta HOM05D005922 ORTHO05D006934 1.2e-60 238.0 286 47.2
HPP92_016714 Vanilla planifolia HOM05D005922 ORTHO05D006934 2.2e-57 227.3 293 44.7
arahy.Tifrunner.gnm1.ann1.05ZMZX Arachis hypogaea HOM05D005922 ORTHO05D006934 4.5e-55 219.5 142 70.4
Mapoly0075s0019 Marchantia polymorpha HOM05D005922 ORTHO05D006934 1.7e-54 217.6 255 49.0
Thecc.02G304700 Theobroma cacao HOM05D005922 ORTHO05D006934 1.7e-54 217.6 280 45.4
SEGI_26303 Sequoiadendron giganteum HOM05D005922 ORTHO05D006934 8.5e-54 215.3 127 75.6
arahy.Tifrunner.gnm1.ann1.GW2J4P Arachis hypogaea HOM05D006503 ORTHO05D008116 1.2e-50 204.9 253 47.0
Migut.O00731 Erythranthe guttata HOM05D005922 ORTHO05D006934 4.4e-50 203.0 254 45.7
Oeu034664.1 Olea europaea HOM05D005922 ORTHO05D006934 1.4e-48 198.0 114 80.7
VMungo0251G2725 Vigna mungo HOM05D005922 ORTHO05D006934 3.3e-45 186.8 237 45.6
Nitab4.5_0001294g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 4.7e-44 183.0 150 55.3
CBR_g16882 Chara braunii HOM05D005922 ORTHO05D006934 5.2e-43 179.5 122 60.7
VMungo0251G3333 Vigna mungo HOM05D005922 ORTHO05D006934 1.2e-42 178.3 102 75.5
BcaB05g23450 Brassica carinata HOM05D005922 ORTHO05D006934 4.4e-42 176.4 112 68.8
Cre12.g486551 Chlamydomonas reinhardtii HOM05D005922 ORTHO05D006934 1.2e-39 168.3 187 46.0
arahy.Tifrunner.gnm1.ann1.P482X0 Arachis hypogaea HOM05D005922 ORTHO05D006934 4.7e-36 156.4 93 77.4
Manes.18G025338 Manihot esculenta HOM05D005922 ORTHO05D006934 6.8e-35 152.5 89 79.8
Oeu031680.1 Olea europaea HOM05D005922 ORTHO05D006934 4.3e-29 133.3 139 53.2
BcaB02g11286 Brassica carinata HOM05D005922 ORTHO05D006934 1.1e-27 128.6 112 58.9
Zm00001eb399130 Zea mays HOM05D005922 ORTHO05D006934 2.9e-25 120.6 86 62.8
arahy.Tifrunner.gnm1.ann1.B3UXS8 Arachis hypogaea HOM05D005922 ORTHO05D006934 1.1e-21 108.6 68 75.0
PRCOL_00005504 Prasinoderma coloniale HOM05D005922 ORTHO05D006934 9.5e-21 105.5 220 31.8
arahy.Tifrunner.gnm1.ann1.62WV2A Arachis hypogaea HOM05D005922 ORTHO05D006934 2.8e-20 104.0 102 47.1
arahy.Tifrunner.gnm1.ann1.QG6U7W Arachis hypogaea HOM05D005922 ORTHO05D006934 2.8e-20 104.0 102 47.1
CDE11G0599 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 1.7e-17 94.7 83 57.8
arahy.Tifrunner.gnm1.ann1.39MP9Z Arachis hypogaea HOM05D002181 ORTHO05D003287 1.6e-15 88.2 105 41.0
arahy.Tifrunner.gnm1.ann1.10JCRR Arachis hypogaea HOM05D000690 ORTHO05D006934 2.7e-15 87.4 50 72.0
arahy.Tifrunner.gnm1.ann1.XTWJ7M Arachis hypogaea HOM05D002181 ORTHO05D006934 4.6e-15 86.7 102 42.2
SEGI_24854 Sequoiadendron giganteum HOM05D005922 ORTHO05D006934 7.8e-15 85.9 228 29.8
arahy.Tifrunner.gnm1.ann1.043Q1E Arachis hypogaea HOM05D005922 ORTHO05D006934 5.6e-13 79.7 49 65.3
Haze_10820 Corylus avellana HOM05D005922 ORTHO05D006934 7.3e-13 79.3 79 55.7
arahy.Tifrunner.gnm1.ann1.QNE0FJ Arachis hypogaea HOM05D002181 ORTHO05D003287 2.8e-12 77.4 49 61.2
MCO06G046 Micromonas commoda HOM05D005922 ORTHO05D006934 1.9e-08 64.7 102 36.3
Manes.17G089020 Manihot esculenta HOM05D005922 ORTHO05D006934 2.4e-08 64.3 78 50.0
A02p14700 Brassica napus HOM05D005922 ORTHO05D006934 2.7e-07 60.8 165 26.7
BraA02t06537Z Brassica rapa HOM05D005922 ORTHO05D006934 2.7e-07 60.8 165 26.7
Zm00001eb371330 Zea mays HOM05D005922 ORTHO05D006934 3.5e-07 60.5 41 61.0


User provided reference genes

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