Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1314 Papaver somniferum HOM05D005881 ORTHO05D007298 3.2e-40 167.9 82 100.0
PSO170G3105 Papaver somniferum HOM05D005881 ORTHO05D007298 1.3e-38 162.5 82 97.6
PSO407G0212 Papaver somniferum HOM05D005881 ORTHO05D007298 5.6e-37 157.1 77 97.4
Lsat_1_v5_gn_9_121521 Lactuca sativa HOM05D005881 ORTHO05D007298 8.1e-36 153.3 80 91.2
ECA246G1780 Erigeron canadensis HOM05D005881 ORTHO05D007298 9.0e-35 149.8 80 91.2
vmacro19838 Vaccinium macrocarpon HOM05D005881 ORTHO05D007298 9.0e-35 149.8 80 88.8
Haze_07862 Corylus avellana HOM05D005881 ORTHO05D007298 2.0e-34 148.7 78 89.7
HanXRQChr17g0543881 Helianthus annuus HOM05D005881 ORTHO05D007298 2.0e-34 148.7 81 88.9
Lj6g0001713 Lotus japonicus HOM05D005881 ORTHO05D007298 2.0e-34 148.7 77 89.6
Eucgr.K01416 Eucalyptus grandis HOM05D005881 ORTHO05D007298 4.4e-34 147.5 82 86.6
Gohir.A01G000500 Gossypium hirsutum HOM05D005881 ORTHO05D007298 4.4e-34 147.5 82 86.6
MD09G1270200 Malus domestica HOM05D005881 ORTHO05D007298 4.4e-34 147.5 78 89.7
Gohir.1Z049413 Gossypium hirsutum HOM05D005881 ORTHO05D007298 5.8e-34 147.1 82 86.6
Gohir.1Z049621 Gossypium hirsutum HOM05D005881 ORTHO05D007298 5.8e-34 147.1 82 86.6
Cfa026039 Carpinus fangiana HOM05D005881 ORTHO05D007298 7.6e-34 146.7 78 88.5
Ciclev10002996m.g Citrus clementina HOM05D005881 ORTHO05D007298 7.6e-34 146.7 80 86.2
Gohir.D10G000200 Gossypium hirsutum HOM05D005881 ORTHO05D007298 7.6e-34 146.7 82 85.4
MBI06_g43454_MAGBIO Magnolia biondii HOM05D005881 ORTHO05D007298 7.6e-34 146.7 78 91.0
Thecc.02G037800 Theobroma cacao HOM05D005881 ORTHO05D007298 7.6e-34 146.7 82 87.8
Aqoxy1G00234 Aquilegia oxysepala HOM05D005881 ORTHO05D007298 9.9e-34 146.4 78 88.5
Duzib052G1237 Durio zibethinus HOM05D005881 ORTHO05D007298 1.3e-33 146.0 78 88.5
Prupe.1G582900 Prunus persica HOM05D005881 ORTHO05D007298 1.3e-33 146.0 77 89.6
RcHm_v2.0_Chr7g0222581 Rosa chinensis HOM05D005881 ORTHO05D007298 1.3e-33 146.0 79 86.1
CiPaw.06G026000 Carya illinoinensis HOM05D005881 ORTHO05D007298 1.7e-33 145.6 78 87.2
Haze_12831 Corylus avellana HOM05D005881 ORTHO05D007298 2.2e-33 145.2 78 88.5
Gorai.002G000700 Gossypium raimondii HOM05D005881 ORTHO05D007298 2.2e-33 145.2 82 85.4
MD17G1268300 Malus domestica HOM05D005881 ORTHO05D007298 2.2e-33 145.2 78 87.2
Oeu010217.3 Olea europaea HOM05D005881 ORTHO05D007298 2.2e-33 145.2 78 88.5
CAN.G855.36 Capsicum annuum HOM05D005881 ORTHO05D007298 2.9e-33 144.8 80 85.0
Peaxi162Scf00450g00736 Petunia axillaris HOM05D005881 ORTHO05D007298 2.9e-33 144.8 82 84.1
Sc07g0003630 Simmondsia chinensis HOM05D005881 ORTHO05D007298 2.9e-33 144.8 78 88.5
Nitab4.5_0001057g0140 Nicotiana tabacum HOM05D005881 ORTHO05D007298 3.8e-33 144.4 77 87.0
ClCG10G007340 Citrullus lanatus HOM05D005881 ORTHO05D007298 4.9e-33 144.1 77 88.3
Manes.07G028000 Manihot esculenta HOM05D005881 ORTHO05D007298 4.9e-33 144.1 78 85.9
Potri.004G227500 Populus trichocarpa HOM05D005881 ORTHO05D007298 4.9e-33 144.1 78 87.2
PGR042G2514 Punica granatum HOM05D005881 ORTHO05D007298 4.9e-33 144.1 78 85.9
TWI79G0203 Tripterygium wilfordii HOM05D005881 ORTHO05D007298 4.9e-33 144.1 78 85.9
DCAR_001713 Daucus carota HOM05D005881 ORTHO05D007298 6.4e-33 143.7 79 84.8
Lalb_Chr18g0053871 Lupinus albus HOM05D005881 ORTHO05D007298 6.4e-33 143.7 77 87.0
Manes.10G110680 Manihot esculenta HOM05D005881 ORTHO05D007298 6.4e-33 143.7 78 87.2
Solyc01g103190.3 Solanum lycopersicum HOM05D005881 ORTHO05D007298 6.4e-33 143.7 82 81.7
Sopen01g045620 Solanum pennellii HOM05D005881 ORTHO05D007298 6.4e-33 143.7 82 81.7
Cc02_g34860 Coffea canephora HOM05D005881 ORTHO05D007298 8.4e-33 143.3 81 84.0
Os02g0560450 Oryza sativa ssp. japonica HOM05D005881 ORTHO05D007298 8.4e-33 143.3 81 84.0
CDE08G1319 Ceratophyllum demersum HOM05D005881 ORTHO05D007298 1.1e-32 142.9 81 84.0
Glyma.11G208400 Glycine max HOM05D005881 ORTHO05D007298 1.1e-32 142.9 77 87.0
Glyma.18G045400 Glycine max HOM05D005881 ORTHO05D007298 1.1e-32 142.9 77 87.0
Hma1.2p1_0052F.1_g029890 Hydrangea macrophylla HOM05D005881 ORTHO05D007298 1.1e-32 142.9 78 87.2
Migut.O00861 Erythranthe guttata HOM05D005881 ORTHO05D007298 1.4e-32 142.5 81 81.5
TAR623G1668 Trochodendron aralioides HOM05D005881 ORTHO05D007298 1.4e-32 142.5 78 87.2
arahy.Tifrunner.gnm1.ann1.8HB0N1 Arachis hypogaea HOM05D005881 ORTHO05D007298 1.9e-32 142.1 77 84.4
Oeu003780.1 Olea europaea HOM05D005881 ORTHO05D007298 1.9e-32 142.1 78 85.9
THA.LOC104812459 Tarenaya hassleriana HOM05D005881 ORTHO05D007298 1.9e-32 142.1 79 83.5
TPR.G37331 Trifolium pratense HOM05D005881 ORTHO05D007298 1.9e-32 142.1 77 85.7
Sopen01g045600 Solanum pennellii HOM05D005881 ORTHO05D007298 2.4e-32 141.7 82 80.5
CSS0041173 Camellia sinensis var. sinensis HOM05D005881 ORTHO05D007298 3.2e-32 141.4 75 88.0
Nn2g11943 Nelumbo nucifera HOM05D005881 ORTHO05D007298 3.2e-32 141.4 78 85.9
Sed0016149 Sechium edule HOM05D005881 ORTHO05D007298 4.2e-32 141.0 77 85.7
Atru.chr6.354 Acer truncatum HOM05D005881 ORTHO05D007298 7.1e-32 140.2 80 80.0
arahy.Tifrunner.gnm1.ann1.6Q1IVA Arachis hypogaea HOM05D005881 ORTHO05D007298 7.1e-32 140.2 77 84.4
arahy.Tifrunner.gnm1.ann1.GZL8T6 Arachis hypogaea HOM05D005881 ORTHO05D007298 7.1e-32 140.2 77 84.4
AUR62022918 Chenopodium quinoa HOM05D005881 ORTHO05D007298 9.3e-32 139.8 77 85.7
Migut.N00857 Erythranthe guttata HOM05D005881 ORTHO05D007298 9.3e-32 139.8 81 80.2
FvH4_5g29590 Fragaria vesca HOM05D005881 ORTHO05D007298 1.2e-31 139.4 80 80.0
Ah.00g001370 Amaranthus hybridus HOM05D005881 ORTHO05D007298 1.6e-31 139.0 77 87.0
CANSAT54G2245 Cannabis sativa HOM05D005881 ORTHO05D007298 1.6e-31 139.0 78 83.3
Medtr3g064240 Medicago truncatula HOM05D005881 ORTHO05D007298 4.6e-31 137.5 77 83.1
Aa31LG6G3200 Aethionema arabicum HOM05D005881 ORTHO05D007298 6.0e-31 137.1 79 81.0
QL02p102397 Quercus lobata HOM05D005881 ORTHO05D007298 6.0e-31 137.1 78 82.1
EL10Ac2g04867 Beta vulgaris HOM05D005881 ORTHO05D007298 7.8e-31 136.7 77 83.1
QL02p103034 Quercus lobata HOM05D005881 ORTHO05D007298 7.8e-31 136.7 78 82.1
Gohir.1Z049575 Gossypium hirsutum HOM05D005881 ORTHO05D007298 1.0e-30 136.3 82 82.9
Gorai.002G000900 Gossypium raimondii HOM05D005881 ORTHO05D007298 1.0e-30 136.3 82 82.9
arahy.Tifrunner.gnm1.ann1.VTJ29R Arachis hypogaea HOM05D005881 ORTHO05D007298 1.3e-30 136.0 82 79.3
THA.LOC104812941 Tarenaya hassleriana HOM05D005881 ORTHO05D007298 1.3e-30 136.0 79 79.7
AL3G11760 Arabidopsis lyrata HOM05D005881 ORTHO05D007298 3.0e-30 134.8 79 83.5
AT4G21192 Arabidopsis thaliana HOM05D005881 ORTHO05D007298 3.0e-30 134.8 79 83.5
Nitab4.5_0002546g0080 Nicotiana tabacum HOM05D005881 ORTHO05D007298 3.0e-30 134.8 92 72.8
AL7G32920 Arabidopsis lyrata HOM05D005881 ORTHO05D007298 6.6e-30 133.7 79 82.3
SGA_v2.0_scaffold254G45257 Striga asiatica HOM05D005881 ORTHO05D007298 6.6e-30 133.7 75 82.7
Carub.0007s2023 Capsella rubella HOM05D005881 ORTHO05D007298 8.7e-30 133.3 79 82.3
Thhalv10026658m.g Eutrema salsugineum HOM05D005881 ORTHO05D007298 1.5e-29 132.5 79 81.0
Sp7g19280 Schrenkiella parvula HOM05D005881 ORTHO05D007298 1.5e-29 132.5 75 81.3
C03p83470 Brassica napus HOM05D005881 ORTHO05D007298 3.3e-29 131.3 79 79.7
CARHR227780 Cardamine hirsuta HOM05D005881 ORTHO05D007298 3.3e-29 131.3 79 79.7
BcaC01g00708 Brassica carinata HOM05D005881 ORTHO05D007298 4.3e-29 131.0 79 79.7
BolC3t20627H Brassica oleracea HOM05D005881 ORTHO05D007298 4.3e-29 131.0 79 79.7
BraA08t33500Z Brassica rapa HOM05D005881 ORTHO05D007298 4.3e-29 131.0 79 79.7
GSVIVG01023198001 Vitis vinifera HOM05D005881 ORTHO05D007298 4.3e-29 131.0 78 78.2
FAN18G0030 Fragaria x ananassa HOM05D005881 ORTHO05D007298 2.1e-28 128.6 97 66.0
A03p52690 Brassica napus HOM05D005881 ORTHO05D007298 6.2e-28 127.1 75 78.7
BcaC06g30655 Brassica carinata HOM05D005881 ORTHO05D007298 8.1e-28 126.7 75 78.7
BraA03t14343Z Brassica rapa HOM05D005881 ORTHO05D007298 8.1e-28 126.7 75 78.7
Gohir.1Z049313 Gossypium hirsutum HOM05D005881 ORTHO05D007298 8.1e-28 126.7 82 78.0
BcaNung00865 Brassica carinata HOM05D005881 ORTHO05D007298 1.4e-27 125.9 75 77.3
C07p51120 Brassica napus HOM05D005881 ORTHO05D007298 1.4e-27 125.9 75 77.3
BolC7t45612H Brassica oleracea HOM05D005881 ORTHO05D007298 1.4e-27 125.9 75 77.3
PGSC0003DMG400024874 Solanum tuberosum HOM05D005881 ORTHO05D007298 3.1e-27 124.8 117 56.4
COL.COLO4_17857 Corchorus olitorius HOM05D005881 ORTHO05D007298 6.9e-27 123.6 71 87.3
Gohir.A01G140426 Gossypium hirsutum HOM05D005881 ORTHO05D007298 9.0e-27 123.2 71 84.5
Gohir.1Z049675 Gossypium hirsutum HOM05D005881 ORTHO05D007298 2.9e-25 118.2 58 89.7
Rhsim11G0129900 Rhododendron simsii HOM05D005881 ORTHO05D007298 3.8e-25 117.9 62 90.3
CsaV3_3G006580 Cucumis sativus L. HOM05D005881 ORTHO05D007298 6.4e-25 117.1 66 84.8
Zm00001eb244030 Zea mays HOM05D005881 ORTHO05D007298 8.4e-25 116.7 70 78.6
Haze_20435 Corylus avellana HOM05D005881 ORTHO05D007298 1.1e-24 116.3 64 87.5
Gohir.1Z049721 Gossypium hirsutum HOM05D005881 ORTHO05D007298 4.2e-24 114.4 73 80.8
Gorai.011G000600 Gossypium raimondii HOM05D005881 ORTHO05D007298 5.4e-24 114.0 73 79.5
MBI06_g45555_MAGBIO Magnolia biondii HOM05D005881 ORTHO05D007298 5.4e-24 114.0 65 86.2
Cfa026049 Carpinus fangiana HOM05D005881 ORTHO05D007298 7.1e-24 113.6 67 82.1
Nitab4.5_0001057g0150 Nicotiana tabacum HOM05D005881 ORTHO05D007298 9.3e-24 113.2 64 84.4
Cfa021151 Carpinus fangiana HOM05D005881 ORTHO05D007298 1.6e-23 112.5 64 84.4
Mapoly0035s0117 Marchantia polymorpha HOM05D005881 ORTHO05D007298 4.6e-23 110.9 74 67.6
unitig_22.g6105 Utricularia gibba HOM05D005881 ORTHO05D007298 6.0e-23 110.5 70 74.3
SGA_v2.0_scaffold131G34400 Striga asiatica HOM05D005881 ORTHO05D007298 2.3e-22 108.6 70 72.9
Rhsim06G0200500 Rhododendron simsii HOM05D005881 ORTHO05D007298 6.7e-22 107.1 66 77.3
A08p15220 Brassica napus HOM05D005881 ORTHO05D007298 4.3e-21 104.4 72 73.6
Haze_10676 Corylus avellana HOM05D005881 ORTHO05D007298 9.6e-21 103.2 64 81.2
Phvul.006G085400 Phaseolus vulgaris HOM05D005881 ORTHO05D007298 9.6e-21 103.2 50 84.0
Haze_09300 Corylus avellana HOM05D005881 ORTHO05D007298 4.8e-20 100.9 64 81.2
AagrBONN_evm.TU.Sc2ySwM_117.2390 Anthoceros agrestis HOM05D005881 ORTHO05D007298 6.2e-20 100.5 77 61.0
Haze_10008 Corylus avellana HOM05D000045 ORTHO05D001346 6.9e-19 97.1 62 75.8
EL10Ac4g07780 Beta vulgaris HOM05D000065 ORTHO05D002939 2.0e-18 95.5 51 80.4
EL10Ac4g07877 Beta vulgaris HOM05D005881 ORTHO05D007298 2.0e-18 95.5 51 80.4
EL10Ac4g10162 Beta vulgaris HOM05D002030 ORTHO05D007413 4.5e-18 94.4 50 78.0
BcaC02g10665 Brassica carinata HOM05D005881 ORTHO05D007298 3.8e-17 91.3 49 75.5
C04p26430 Brassica napus HOM05D005881 ORTHO05D007298 3.8e-17 91.3 49 75.5
BolC4t24162H Brassica oleracea HOM05D005881 ORTHO05D007298 3.8e-17 91.3 49 75.5
HPP92_009201 Vanilla planifolia HOM05D005881 ORTHO05D007298 5.5e-16 87.4 50 82.0
EL10Ac7g16281 Beta vulgaris HOM05D005881 ORTHO05D007298 1.0e-14 83.2 66 60.6
MBI06_g35042_MAGBIO Magnolia biondii HOM05D005881 ORTHO05D007298 1.1e-11 73.2 66 60.6
Nitab4.5_0001129g0150 Nicotiana tabacum HOM05D005881 ORTHO05D007298 3.1e-11 71.6 39 92.3
MELO3C032219.2 Cucumis melo HOM05D005881 ORTHO05D007298 5.3e-11 70.9 35 85.7
arahy.Tifrunner.gnm1.ann1.0A1TZX Arachis hypogaea HOM05D001400 ORTHO05D016394 2.6e-10 68.6 36 75.0
EL10Ac4g10126 Beta vulgaris HOM05D002030 ORTHO05D007413 3.8e-09 64.7 38 68.4
MCO07G551 Micromonas commoda HOM05D005881 ORTHO05D007298 2.7e-07 58.5 85 34.1
SHI38298 Sapria himalayana HOM05D005881 ORTHO05D000001 6.1e-07 57.4 39 59.0
Cre16.g682587 Chlamydomonas reinhardtii HOM05D005881 ORTHO05D007298 3.9e-06 54.7 84 35.7


User provided reference genes

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