Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 3.3e-281 971.1 502 100.0
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 7.4e-265 916.8 503 95.2
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.6e-155 553.5 508 63.8
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 1.1e-143 514.2 377 70.0
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 2.5e-143 513.1 429 63.9
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 2.1e-142 510.0 503 57.5
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 5.1e-141 505.4 415 64.6
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 2.6e-140 503.1 499 59.1
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 9.7e-140 501.1 402 65.4
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 3.7e-139 499.2 426 62.7
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 4.8e-139 498.8 458 59.4
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 8.2e-139 498.0 482 58.3
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 1.2e-137 494.2 423 63.1
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 3.4e-137 492.7 419 61.8
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 7.7e-137 491.5 449 59.5
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 7.7e-137 491.5 348 70.1
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 1.7e-136 490.3 499 55.1
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 3.8e-136 489.2 381 65.6
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.0e-136 488.8 353 69.1
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 2.3e-133 479.9 436 59.2
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 3.0e-133 479.6 392 63.8
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 3.0e-133 479.6 500 54.4
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 2.0e-132 476.9 487 56.1
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 3.3e-132 476.1 450 58.4
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 5.7e-132 475.3 367 65.4
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 2.8e-131 473.0 367 64.9
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 2.8e-131 473.0 415 60.7
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 4.8e-131 472.2 394 60.2
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 1.1e-130 471.1 350 67.7
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 1.4e-130 470.7 393 61.6
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 4.1e-130 469.2 563 51.7
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 5.3e-130 468.8 415 60.0
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 5.3e-130 468.8 370 63.5
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 7.0e-130 468.4 437 60.2
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 7.0e-130 468.4 503 53.1
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 1.2e-129 467.6 560 51.4
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 2.6e-129 466.5 439 56.7
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 2.2e-128 463.4 381 61.9
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 2.2e-128 463.4 407 60.9
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 2.9e-128 463.0 362 64.9
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 6.5e-128 461.8 384 62.2
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 1.1e-127 461.1 412 60.0
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 7.2e-127 458.4 365 64.1
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.6e-126 457.2 454 53.5
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 1.4e-125 454.1 439 55.4
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 1.8e-125 453.8 345 63.8
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 3.0e-125 453.0 375 62.1
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 5.2e-125 452.2 459 56.6
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 5.2e-125 452.2 326 69.0
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 8.8e-125 451.4 382 60.5
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 1.2e-124 451.1 415 59.5
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 1.2e-124 451.1 436 56.0
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 2.0e-124 450.3 504 52.6
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 3.3e-124 449.5 375 62.9
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 4.4e-124 449.1 327 69.1
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 7.5e-124 448.4 437 56.1
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 9.7e-124 448.0 514 50.6
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 4.8e-123 445.7 308 70.8
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 8.2e-123 444.9 328 69.2
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 1.4e-122 444.1 410 57.6
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 1.4e-122 444.1 366 62.6
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 1.8e-122 443.7 351 64.4
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 3.1e-122 443.0 353 64.3
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 9.1e-122 441.4 351 64.1
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 9.1e-122 441.4 399 58.1
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 3.5e-121 439.5 322 66.8
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 7.7e-121 438.3 316 69.0
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 1.3e-120 437.6 502 49.8
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 3.8e-120 436.0 385 60.3
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 6.5e-120 435.3 499 50.5
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.5e-120 434.9 325 67.1
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 1.5e-119 434.1 364 61.0
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 5.5e-119 432.2 402 58.7
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 9.4e-119 431.4 453 54.1
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 1.6e-118 430.6 421 56.1
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 6.1e-118 428.7 379 58.6
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 6.1e-118 428.7 452 53.3
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 1.0e-117 427.9 418 57.2
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 5.2e-117 425.6 414 55.8
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.2e-116 424.5 441 52.6
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.7e-116 422.2 406 56.2
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.7e-115 420.6 329 65.0
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 2.8e-115 419.9 419 55.6
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 2.0e-113 413.7 332 63.3
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 7.7e-113 411.8 364 57.1
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 7.7e-113 411.8 346 59.5
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 2.4e-106 390.2 384 53.9
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.6e-105 387.5 299 63.5
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 5.6e-103 379.0 295 61.4
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 5.2e-101 372.5 335 58.8
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 8.9e-101 371.7 306 64.1
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 1.2e-100 371.3 306 64.4
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 6.4e-99 365.5 257 67.3
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 4.1e-98 362.8 552 42.4
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.6e-92 343.6 364 51.9
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 4.6e-89 332.8 278 60.8
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 2.6e-84 317.0 314 56.1
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 2.7e-81 307.0 370 51.4
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 4.6e-81 306.2 242 63.2
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 5.4e-74 282.7 295 46.4
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 5.1e-72 276.2 277 53.1
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 1.1e-71 275.0 313 51.4
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 9.6e-71 271.9 369 45.5
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 1.1e-69 268.5 207 61.8
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 2.6e-68 263.8 281 53.7
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 2.4e-61 240.7 190 60.5
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 6.0e-57 226.1 154 74.0
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 1.8e-56 224.6 182 58.8
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 2.3e-56 224.2 174 67.2
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 1.3e-51 208.4 190 53.2
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 4.9e-51 206.5 298 38.9
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 1.9e-50 204.5 242 45.9
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 1.4e-42 178.3 200 49.5
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 3.2e-42 177.2 203 47.8
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 1.1e-39 168.7 186 48.9
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 7.2e-34 149.4 111 60.4
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 1.0e-32 145.6 238 41.2
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 1.5e-31 141.7 169 46.7
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 4.3e-31 140.2 146 49.3
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 2.4e-29 134.4 196 39.8
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 6.5e-27 126.3 82 64.6
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 4.2e-26 123.6 173 46.2
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 7.2e-26 122.9 188 43.1
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 3.0e-24 117.5 108 56.5
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 6.7e-24 116.3 96 63.5
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 8.8e-24 115.9 119 54.6
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 1.5e-23 115.2 78 73.1
Thecc.02G284900 Theobroma cacao HOM05D005158 ORTHO05D005510 9.7e-23 112.5 204 39.7
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 2.2e-22 111.3 312 28.8
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 7.7e-20 102.8 224 34.4
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 3.8e-19 100.5 138 44.9
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 8.5e-19 99.4 184 33.2
Pp3c9_21990 Physcomitrium patens HOM05D005158 ORTHO05D005510 1.9e-18 98.2 392 25.5
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 1.4e-16 92.0 107 51.4
HanXRQChr08g0212271 Helianthus annuus HOM05D005158 ORTHO05D005510 3.0e-16 90.9 63 71.4
Manes.09G075257 Manihot esculenta HOM05D005158 ORTHO05D005510 3.9e-16 90.5 122 44.3
Mapoly0003s0267 Marchantia polymorpha HOM05D032652 ORTHO05D005510 4.8e-14 83.6 383 25.3
AagrBONN_evm.TU.Sc2ySwM_117.460 Anthoceros agrestis HOM05D005158 ORTHO05D005510 1.1e-13 82.4 335 25.1
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 3.1e-13 80.9 58 65.5
MCO04G437 Micromonas commoda HOM05D005158 ORTHO05D005510 1.2e-12 79.0 311 25.4
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 7.7e-12 76.3 59 62.7
Aqoxy2G01678 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 1.1e-10 72.4 62 48.4
MCO07G404 Micromonas commoda HOM05D005158 ORTHO05D005510 1.1e-10 72.4 260 27.3
Pp3c15_24210 Physcomitrium patens HOM05D005158 ORTHO05D005510 7.2e-10 69.7 255 28.2
CBR_g49491 Chara braunii HOM05D005158 ORTHO05D005510 1.4e-08 65.5 195 28.7


User provided reference genes

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