Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1092 Papaver somniferum HOM05D001568 ORTHO05D008804 1.0e-157 560.1 286 100.0
PSO170G6576 Papaver somniferum HOM05D001568 ORTHO05D008804 3.0e-154 548.5 286 97.9
TAR628G1281 Trochodendron aralioides HOM05D001568 ORTHO05D008804 1.5e-121 439.9 284 75.0
Nn5g30645 Nelumbo nucifera HOM05D001568 ORTHO05D008804 2.7e-118 429.1 284 73.9
Aqoxy1G00265 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 1.6e-115 419.9 277 76.5
CSS0011887 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D008804 2.3e-114 416.0 292 72.3
Manes.07G057400 Manihot esculenta HOM05D001568 ORTHO05D008804 3.1e-114 415.6 286 74.5
TWI14G1141 Tripterygium wilfordii HOM05D001568 ORTHO05D008804 3.7e-112 408.7 280 71.8
Hma1.2p1_0661F.1_g198113 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 6.4e-112 407.9 277 72.2
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 1.9e-111 406.4 284 71.1
Atru.chr5.2305 Acer truncatum HOM05D001568 ORTHO05D008804 2.4e-111 406.0 280 73.2
CANSAT25G3386 Cannabis sativa HOM05D001568 ORTHO05D008804 5.0e-109 398.3 284 70.8
Rhsim05G0092700 Rhododendron simsii HOM05D001568 ORTHO05D008804 4.3e-108 395.2 286 70.3
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 1.8e-106 389.8 277 71.1
Haze_10309 Corylus avellana HOM05D001568 ORTHO05D008804 3.1e-106 389.0 295 69.2
FvH4_2g03440 Fragaria vesca HOM05D001568 ORTHO05D008804 3.4e-105 385.6 295 68.1
Prupe.8G149200 Prunus persica HOM05D001568 ORTHO05D008804 3.4e-105 385.6 261 72.0
Thecc.02G119500 Theobroma cacao HOM05D001568 ORTHO05D008804 4.4e-105 385.2 286 69.2
ECA240G3857 Erigeron canadensis HOM05D001568 ORTHO05D008804 5.8e-105 384.8 284 69.0
Potri.001G290100 Populus trichocarpa HOM05D001568 ORTHO05D008804 7.5e-105 384.4 276 71.4
CiPaw.05G020500 Carya illinoinensis HOM05D001568 ORTHO05D008804 1.7e-104 383.3 284 70.4
Migut.B00460 Erythranthe guttata HOM05D001568 ORTHO05D008804 4.9e-104 381.7 256 73.4
TPR.G21139 Trifolium pratense HOM05D001568 ORTHO05D008804 4.9e-104 381.7 285 69.1
Actinidia04394 Actinidia chinensis HOM05D001568 ORTHO05D008804 1.1e-103 380.6 291 67.0
CDE04G1257 Ceratophyllum demersum HOM05D001568 ORTHO05D008804 2.4e-103 379.4 280 67.1
Medtr1g106055 Medicago truncatula HOM05D001568 ORTHO05D008804 2.4e-103 379.4 281 68.7
HanXRQChr03g0072921 Helianthus annuus HOM05D001568 ORTHO05D008804 4.1e-103 378.6 286 67.1
QL11p029473 Quercus lobata HOM05D001568 ORTHO05D008804 9.2e-103 377.5 340 59.4
Gorai.008G019500 Gossypium raimondii HOM05D001568 ORTHO05D008804 1.2e-102 377.1 279 68.1
Solyc01g106880.3 Solanum lycopersicum HOM05D001568 ORTHO05D008804 1.6e-102 376.7 281 65.8
Gohir.A12G018701 Gossypium hirsutum HOM05D001568 ORTHO05D008804 4.6e-102 375.2 284 67.6
Glyma.20G135600 Glycine max HOM05D001568 ORTHO05D008804 7.8e-102 374.4 272 69.9
RcHm_v2.0_Chr6g0248601 Rosa chinensis HOM05D001568 ORTHO05D008804 1.0e-101 374.0 305 64.3
Lj1g0020001 Lotus japonicus HOM05D001568 ORTHO05D008804 3.0e-101 372.5 281 68.0
Sopen01g049160 Solanum pennellii HOM05D001568 ORTHO05D008804 3.0e-101 372.5 281 65.5
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 5.1e-101 371.7 251 72.9
Lalb_Chr06g0165001 Lupinus albus HOM05D001568 ORTHO05D008804 1.5e-100 370.2 270 68.5
EL10Ac9g22185 Beta vulgaris HOM05D001568 ORTHO05D008804 3.3e-100 369.0 284 65.5
Ca_11027_v3 Cicer arietinum L. HOM05D001568 ORTHO05D008804 5.6e-100 368.2 287 66.9
ATR0739G203 Amborella trichopoda HOM05D001568 ORTHO05D008804 8.1e-99 364.4 282 64.9
Nitab4.5_0010145g0020 Nicotiana tabacum HOM05D001568 ORTHO05D008804 1.8e-98 363.2 297 62.0
MBI16_g16470_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D008804 3.1e-98 362.5 230 77.0
Sp1g36840 Schrenkiella parvula HOM05D001568 ORTHO05D008804 3.1e-98 362.5 287 64.5
SpUn0137_0040 Schrenkiella parvula HOM05D001568 ORTHO05D008804 3.1e-98 362.5 287 64.5
VMungo0720G2114 Vigna mungo HOM05D001568 ORTHO05D008804 3.1e-98 362.5 284 66.5
AL1G57570 Arabidopsis lyrata HOM05D001568 ORTHO05D008804 4.0e-98 362.1 287 64.5
Nitab4.5_0001099g0070 Nicotiana tabacum HOM05D001568 ORTHO05D008804 5.2e-98 361.7 281 63.7
AT1G50000 Arabidopsis thaliana HOM05D001568 ORTHO05D008804 6.8e-98 361.3 287 63.4
THA.LOC104826496 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 1.2e-97 360.5 271 66.4
DCAR_001738 Daucus carota HOM05D001568 ORTHO05D008804 2.0e-97 359.8 249 68.3
Cfa004706 Carpinus fangiana HOM05D001568 ORTHO05D008804 4.4e-97 358.6 289 66.1
Sc14g0002500 Simmondsia chinensis HOM05D001568 ORTHO05D008804 4.4e-97 358.6 252 71.0
THA.LOC104826495 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 4.4e-97 358.6 271 66.1
Lsat_1_v5_gn_9_113380 Lactuca sativa HOM05D001568 ORTHO05D008804 7.6e-97 357.8 279 65.9
Cc00_g17990 Coffea canephora HOM05D001568 ORTHO05D008804 1.7e-96 356.7 292 61.6
CsaV3_7G007700 Cucumis sativus L. HOM05D001568 ORTHO05D008804 4.9e-96 355.1 276 63.0
CAN.G606.69 Capsicum annuum HOM05D001568 ORTHO05D008804 6.4e-96 354.8 307 59.6
unitig_744.g24207 Utricularia gibba HOM05D001568 ORTHO05D008804 6.4e-96 354.8 253 68.8
Carub.0151s0002 Capsella rubella HOM05D001568 ORTHO05D008804 1.1e-95 354.0 287 63.4
COL.COLO4_32489 Corchorus olitorius HOM05D001568 ORTHO05D008804 1.1e-95 354.0 279 65.2
SalBow6G4520 Salvia bowleyana HOM05D001568 ORTHO05D008804 1.1e-95 354.0 310 60.3
SGA_v2.0_scaffold225G43060 Striga asiatica HOM05D001568 ORTHO05D008804 1.1e-95 354.0 310 60.0
MELO3C018530.2 Cucumis melo HOM05D001568 ORTHO05D008804 1.9e-95 353.2 276 62.7
BcaB07g33452 Brassica carinata HOM05D001568 ORTHO05D008804 3.2e-95 352.4 250 68.4
Cfa004705 Carpinus fangiana HOM05D001568 ORTHO05D008804 4.1e-95 352.1 263 68.8
MD10G1109100 Malus domestica HOM05D001568 ORTHO05D008804 9.2e-95 350.9 234 74.4
Lj9A337T44 Lonicera japonica HOM05D001568 ORTHO05D008804 1.7e-93 346.7 229 72.1
FAN15G2988 Fragaria x ananassa HOM05D001568 ORTHO05D008804 5.1e-93 345.1 234 72.2
A06p03430 Brassica napus HOM05D001568 ORTHO05D008804 6.6e-93 344.7 295 60.7
BcaC08g43178 Brassica carinata HOM05D001568 ORTHO05D008804 8.6e-93 344.4 295 60.7
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 7.3e-92 341.3 233 72.5
HPP92_026588 Vanilla planifolia HOM05D001568 ORTHO05D008804 6.2e-91 338.2 274 61.7
arahy.Tifrunner.gnm1.ann1.804FU2 Arachis hypogaea HOM05D001568 ORTHO05D008804 8.1e-91 337.8 230 71.7
arahy.Tifrunner.gnm1.ann1.ESII2D Arachis hypogaea HOM05D001568 ORTHO05D008804 8.1e-91 337.8 230 72.2
BraA06t23551Z Brassica rapa HOM05D001568 ORTHO05D008804 1.1e-90 337.4 296 59.8
BolC6t35607H Brassica oleracea HOM05D001568 ORTHO05D008804 1.4e-90 337.0 296 60.1
Gohir.D12G019200 Gossypium hirsutum HOM05D001568 ORTHO05D008804 1.4e-90 337.0 278 62.6
C06p04780 Brassica napus HOM05D001568 ORTHO05D008804 3.1e-90 335.9 296 59.8
ClCG02G007120 Citrullus lanatus HOM05D001568 ORTHO05D008804 8.9e-90 334.3 282 61.3
Os03g0729700 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D008804 7.6e-89 331.3 248 62.9
Thhalv10011739m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 1.7e-88 330.1 232 69.0
Peaxi162Scf00016g03020 Petunia axillaris HOM05D001568 ORTHO05D008804 9.0e-82 307.8 254 61.4
Hma1.2p1_0661F.1_g198116 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 7.6e-81 304.7 203 73.9
CARHR040100 Cardamine hirsuta HOM05D001568 ORTHO05D008804 1.3e-80 303.9 218 68.3
AUR62027019 Chenopodium quinoa HOM05D001568 ORTHO05D008804 2.2e-80 303.1 217 69.6
Phvul.007G046900 Phaseolus vulgaris HOM05D001568 ORTHO05D008804 2.4e-79 299.7 238 64.3
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 1.9e-76 290.0 266 59.4
AUR62030859 Chenopodium quinoa HOM05D001568 ORTHO05D008804 3.3e-76 289.3 205 70.7
AagrBONN_evm.TU.Sc2ySwM_362.475 Anthoceros agrestis HOM05D001568 ORTHO05D008804 4.8e-75 285.4 270 54.1
PGR142G1084 Punica granatum HOM05D001568 ORTHO05D008804 8.1e-75 284.6 203 69.0
Aa31LG10G4130 Aethionema arabicum HOM05D001568 ORTHO05D008804 7.6e-73 278.1 207 66.7
Psat6g214440 Pisum sativum HOM05D001568 ORTHO05D008804 1.4e-71 273.9 195 68.2
Mapoly0081s0053 Marchantia polymorpha HOM05D001568 ORTHO05D008804 7.9e-70 268.1 258 50.4
Pp3c3_17050 Physcomitrium patens HOM05D001568 ORTHO05D008804 3.0e-69 266.2 249 51.8
Sed0001597 Sechium edule HOM05D001568 ORTHO05D008804 7.4e-68 261.5 277 50.9
Ah.01g007040 Amaranthus hybridus HOM05D001568 ORTHO05D008804 2.1e-67 260.0 183 68.3
Sabra16G0181700 Salix brachista HOM05D001568 ORTHO05D008804 2.0e-65 253.4 220 62.7
TAR376G0809 Trochodendron aralioides HOM05D001568 ORTHO05D008804 1.8e-61 240.4 284 52.1
SMO358G0428 Selaginella moellendorffii HOM05D001568 ORTHO05D008804 3.0e-61 239.6 248 51.2
CBR_g48696 Chara braunii HOM05D001568 ORTHO05D008804 3.9e-61 239.2 245 50.6
FAN24G1144 Fragaria x ananassa HOM05D001568 ORTHO05D008804 1.5e-60 237.3 209 59.3
THA.LOC104809178 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 5.7e-60 235.3 165 71.5
Manes.10G086502 Manihot esculenta HOM05D001568 ORTHO05D008804 1.2e-49 201.1 276 43.8
Aqoxy335s004 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 1.5e-49 200.7 121 81.0
MCO02G312 Micromonas commoda HOM05D001568 ORTHO05D008804 6.5e-32 142.1 177 45.8
FAN24G0164 Fragaria x ananassa HOM05D001568 ORTHO05D008804 2.5e-31 140.2 109 67.0
Thhalv10012254m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 5.5e-23 112.5 101 56.4
PRCOL_00000434 Prasinoderma coloniale HOM05D001568 ORTHO05D008804 2.7e-22 110.2 299 32.4
MSTRG.20236 Avicennia marina HOM05D001568 ORTHO05D008804 8.0e-22 108.6 101 54.5
Cre03.g175800 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D008804 1.0e-21 108.2 339 29.8
Rhsim05G0092200 Rhododendron simsii HOM05D001568 ORTHO05D004404 2.6e-12 77.0 102 46.1
RhsimUnG0183700 Rhododendron simsii HOM05D002338 ORTHO05D006706 2.6e-12 77.0 102 46.1
Ah.01g007020 Amaranthus hybridus HOM05D001568 ORTHO05D008804 9.8e-12 75.1 48 70.8
C05p34140 Brassica napus HOM05D001568 ORTHO05D019891 5.9e-09 65.9 50 60.0
BcaC05g27454 Brassica carinata HOM05D001568 ORTHO05D019891 1.7e-08 64.3 50 56.0
BcaC05g27456 Brassica carinata HOM05D001568 ORTHO05D019891 1.7e-08 64.3 50 56.0
BolC5t32148H Brassica oleracea HOM05D058656 ORTHO05D019891 1.7e-08 64.3 50 56.0
RcHm_v2.0_Chr6g0248571 Rosa chinensis HOM05D001568 ORTHO05D008804 1.7e-08 64.3 110 41.8
Actinidia27998 Actinidia chinensis HOM05D001568 ORTHO05D008804 5.6e-07 59.3 34 73.5
Haze_10306 Corylus avellana HOM05D000031 ORTHO05D001033 3.6e-06 56.6 48 62.5
Atru.chr5.1458 Acer truncatum HOM05D003798 ORTHO05D004652 6.1e-06 55.8 46 54.3


User provided reference genes

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