Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 7.9e-255 883.2 437 100.0
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 3.2e-216 755.0 440 85.9
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 1.2e-213 746.5 440 85.9
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 1.2e-213 746.5 441 86.6
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 1.5e-208 729.6 442 84.6
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 2.1e-207 725.7 439 85.6
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 2.3e-206 722.2 437 83.3
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 4.9e-204 714.5 443 82.6
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 1.1e-203 713.4 441 82.5
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 2.7e-202 708.8 432 81.7
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 9.2e-187 657.1 441 76.4
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 7.3e-184 647.5 439 76.3
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 2.3e-182 642.5 443 75.8
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 7.6e-173 610.9 452 71.0
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 4.9e-140 501.9 439 60.4
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 4.6e-138 495.4 426 59.9
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 6.7e-137 491.5 422 60.0
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 1.9e-136 490.0 422 60.9
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.3e-135 487.3 431 59.9
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 6.9e-134 481.5 431 57.5
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 2.6e-133 479.6 422 58.1
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 5.9e-133 478.4 435 57.7
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 2.9e-132 476.1 433 57.7
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 8.5e-132 474.6 439 57.2
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 1.4e-131 473.8 348 66.1
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 3.2e-131 472.6 427 58.3
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 9.4e-131 471.1 423 58.2
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 2.3e-129 466.5 431 56.8
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 2.2e-127 459.9 424 55.4
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 2.8e-127 459.5 428 55.8
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 4.8e-127 458.8 440 55.7
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 4.8e-127 458.8 428 56.3
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 8.2e-127 458.0 424 57.3
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.4e-126 457.2 424 58.0
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 2.4e-126 456.4 422 55.0
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 3.1e-126 456.1 424 54.0
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 6.9e-126 454.9 436 57.1
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 6.9e-126 454.9 423 57.4
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 9.1e-126 454.5 424 55.0
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 9.1e-126 454.5 422 54.3
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 1.5e-125 453.8 427 56.0
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 2.0e-125 453.4 428 57.0
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 2.6e-125 453.0 426 56.1
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 3.4e-125 452.6 426 56.1
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 4.5e-125 452.2 431 56.1
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 4.5e-125 452.2 428 56.1
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 5.9e-125 451.8 429 53.8
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 5.9e-125 451.8 421 56.8
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 7.7e-125 451.4 428 56.5
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 1.7e-124 450.3 424 57.8
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 3.8e-124 449.1 423 56.0
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 1.1e-123 447.6 434 55.8
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 1.4e-123 447.2 424 55.9
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 2.5e-123 446.4 424 54.0
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 2.5e-123 446.4 416 57.0
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 3.2e-123 446.0 428 54.2
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 4.2e-123 445.7 425 55.8
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 4.2e-123 445.7 429 53.6
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 7.2e-123 444.9 424 55.7
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 9.4e-123 444.5 428 55.6
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 9.4e-123 444.5 423 53.4
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 1.6e-122 443.7 426 54.7
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 2.1e-122 443.4 422 53.1
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 1.8e-121 440.3 418 53.6
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 1.8e-121 440.3 418 53.6
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 1.8e-121 440.3 418 53.6
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 2.3e-121 439.9 424 54.2
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 1.5e-120 437.2 418 53.8
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 2.6e-120 436.4 435 52.6
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 3.3e-120 436.0 424 55.0
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 4.4e-120 435.6 424 54.7
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 7.4e-120 434.9 418 53.6
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 9.7e-120 434.5 346 59.5
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 9.7e-120 434.5 423 54.1
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.3e-119 434.1 424 54.7
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 1.3e-119 434.1 345 58.8
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 2.8e-119 433.0 427 52.5
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 3.7e-119 432.6 426 53.8
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 8.2e-119 431.4 389 56.8
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 8.2e-119 431.4 422 55.5
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.4e-118 430.6 422 55.0
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.4e-118 430.6 446 52.9
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 1.8e-118 430.3 430 52.1
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 1.8e-118 430.3 429 52.7
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 4.1e-118 429.1 426 51.6
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 5.3e-118 428.7 421 53.0
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 7.0e-118 428.3 418 52.6
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 7.0e-118 428.3 423 53.4
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 9.1e-118 427.9 371 58.0
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 1.2e-117 427.6 424 54.0
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.2e-117 427.6 347 59.1
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 1.5e-117 427.2 421 52.7
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 1.5e-117 427.2 392 56.6
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 2.0e-117 426.8 386 56.7
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 2.6e-117 426.4 400 55.8
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 3.5e-117 426.0 422 53.1
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 7.7e-117 424.9 430 51.6
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 1.0e-116 424.5 437 53.5
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 1.3e-116 424.1 422 52.1
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 2.2e-116 423.3 423 52.2
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 2.9e-116 422.9 425 52.9
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 2.5e-115 419.9 342 59.6
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 2.5e-115 419.9 385 55.3
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 3.2e-115 419.5 423 52.0
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 4.2e-115 419.1 348 60.6
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 7.2e-115 418.3 387 55.0
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 7.2e-115 418.3 346 58.4
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 7.2e-115 418.3 385 55.8
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 9.4e-115 417.9 387 55.0
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 9.4e-115 417.9 339 59.3
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 1.2e-114 417.5 423 52.7
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 1.2e-114 417.5 423 52.7
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 1.2e-114 417.5 423 52.7
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 1.2e-114 417.5 402 53.0
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 2.1e-114 416.8 339 58.4
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 3.6e-114 416.0 424 51.7
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 6.1e-114 415.2 426 53.3
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 2.3e-113 413.3 424 53.1
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 2.3e-113 413.3 405 51.6
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 5.2e-113 412.1 346 57.8
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 5.2e-113 412.1 417 53.5
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 1.5e-112 410.6 391 55.8
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 2.0e-112 410.2 347 57.9
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 2.0e-112 410.2 345 60.0
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 7.4e-112 408.3 339 57.5
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 9.7e-112 407.9 453 49.7
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 2.8e-111 406.4 393 53.4
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 3.7e-111 406.0 355 56.6
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 1.1e-107 394.4 424 49.8
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 5.5e-107 392.1 428 48.8
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 5.5e-107 392.1 454 49.6
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 2.3e-105 386.7 340 52.6
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 3.0e-105 386.3 355 54.4
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 2.0e-104 383.6 330 55.5
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 2.2e-103 380.2 339 52.5
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 6.3e-103 378.6 340 55.6
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 9.1e-102 374.8 288 59.0
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 2.0e-101 373.6 441 47.6
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 5.2e-97 359.0 430 46.0
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 3.7e-95 352.8 251 66.5
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 3.7e-95 352.8 430 45.8
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.2e-93 347.8 306 56.9
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 3.8e-92 342.8 339 48.4
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 2.1e-90 337.0 353 47.6
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.2e-88 331.3 343 47.8
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 5.7e-88 328.9 427 46.4
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 8.3e-87 325.1 389 43.4
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 9.2e-86 321.6 247 61.1
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 1.2e-85 321.2 365 44.4
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 5.0e-84 315.8 299 52.2
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 6.1e-82 308.9 344 45.9
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.0e-81 308.1 370 44.1
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 1.4e-81 307.8 390 42.3
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.9e-79 300.1 348 45.7
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 2.4e-78 297.0 278 57.2
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 3.2e-78 296.6 237 59.9
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 9.5e-75 285.0 352 41.5
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 4.0e-73 279.6 386 42.0
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 5.8e-72 275.8 349 43.3
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 2.2e-71 273.9 237 53.6
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 7.1e-70 268.9 302 44.7
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 3.5e-69 266.5 352 41.5
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 7.8e-69 265.4 242 53.7
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.7e-68 264.2 348 39.7
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.9e-67 260.8 348 39.7
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 2.3e-65 253.8 237 51.9
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.2e-64 251.5 343 41.4
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 7.6e-64 248.8 350 37.7
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 2.8e-58 230.3 244 44.3
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 2.7e-53 213.8 364 34.3
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 3.5e-37 160.2 413 28.3
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 6.0e-37 159.5 150 54.0
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 4.3e-27 126.7 154 44.2
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.9e-19 101.3 115 39.1
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.1e-13 81.3 124 45.2
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 6.1e-13 79.7 101 34.7
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.9e-12 77.0 88 46.6
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 5.1e-12 76.6 68 48.5
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.5e-11 75.1 115 37.4
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 2.4e-09 67.8 74 43.2
Nn1g01454 Nelumbo nucifera HOM05D003764 ORTHO05D004356 4.2e-06 57.0 42 69.0


User provided reference genes

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