Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1036 Papaver somniferum HOM05D005558 ORTHO05D006832 2.8e-134 481.9 234 100.0
PSO170G6225 Papaver somniferum HOM05D005558 ORTHO05D006832 2.7e-100 369.0 181 95.6
Nn6g31548 Nelumbo nucifera HOM05D005558 ORTHO05D006832 7.3e-82 307.8 186 78.5
Cfa014170 Carpinus fangiana HOM05D005558 ORTHO05D006832 1.6e-81 306.6 204 75.5
QL02p016334 Quercus lobata HOM05D005558 ORTHO05D006832 1.7e-78 296.6 189 77.8
CiPaw.08G079200 Carya illinoinensis HOM05D005558 ORTHO05D006832 2.9e-78 295.8 183 78.1
ATR0605G185 Amborella trichopoda HOM05D005558 ORTHO05D006832 1.9e-77 293.1 189 75.1
CiPaw.07G129900 Carya illinoinensis HOM05D005558 ORTHO05D006832 4.2e-77 292.0 190 75.8
Aqoxy5G00965 Aquilegia oxysepala HOM05D005558 ORTHO05D006832 2.1e-76 289.7 190 73.2
Hma1.2p1_0914F.1_g236230 Hydrangea macrophylla HOM05D005558 ORTHO05D006832 2.5e-74 282.7 194 71.1
Lj4g0004166 Lotus japonicus HOM05D005558 ORTHO05D006832 3.3e-74 282.3 185 74.1
Medtr4g084120 Medicago truncatula HOM05D005558 ORTHO05D006832 3.3e-74 282.3 165 81.2
arahy.Tifrunner.gnm1.ann1.8D2970 Arachis hypogaea HOM05D005558 ORTHO05D006832 4.3e-74 282.0 147 86.4
arahy.Tifrunner.gnm1.ann1.GVHP98 Arachis hypogaea HOM05D005558 ORTHO05D006832 4.3e-74 282.0 147 86.4
PGR083G0867 Punica granatum HOM05D005558 ORTHO05D006832 4.3e-74 282.0 221 67.4
Nitab4.5_0003423g0040 Nicotiana tabacum HOM05D005558 ORTHO05D006832 7.4e-74 281.2 191 70.2
Solyc12g095770.2 Solanum lycopersicum HOM05D005558 ORTHO05D006832 1.3e-73 280.4 177 74.0
Sopen12g031670 Solanum pennellii HOM05D005558 ORTHO05D006832 1.3e-73 280.4 177 74.6
TPR.G20977 Trifolium pratense HOM05D005558 ORTHO05D006832 1.6e-73 280.0 184 75.5
COL.COLO4_12262 Corchorus olitorius HOM05D005558 ORTHO05D006832 2.1e-73 279.6 184 72.3
Lsat_1_v5_gn_2_2740 Lactuca sativa HOM05D005558 ORTHO05D006832 2.1e-73 279.6 173 74.6
RcHm_v2.0_Chr7g0217691 Rosa chinensis HOM05D005558 ORTHO05D006832 2.1e-73 279.6 185 72.4
CSS0024776 Camellia sinensis var. sinensis HOM05D005558 ORTHO05D006832 2.8e-73 279.3 194 71.6
Ca_18758_v3 Cicer arietinum L. HOM05D005558 ORTHO05D006832 1.1e-72 277.3 185 73.0
MSTRG.24533 Avicennia marina HOM05D005558 ORTHO05D006832 1.8e-72 276.6 143 86.0
Psat7g129880 Pisum sativum HOM05D005558 ORTHO05D006832 1.8e-72 276.6 198 68.7
FvH4_5g26780 Fragaria vesca HOM05D005558 ORTHO05D006832 2.4e-72 276.2 184 71.7
FAN18G4437 Fragaria x ananassa HOM05D005558 ORTHO05D006832 2.4e-72 276.2 184 71.7
Sc17g0004140 Simmondsia chinensis HOM05D005558 ORTHO05D006832 2.4e-72 276.2 186 71.5
arahy.Tifrunner.gnm1.ann1.09GV4T Arachis hypogaea HOM05D005558 ORTHO05D006832 3.1e-72 275.8 183 73.8
arahy.Tifrunner.gnm1.ann1.H4MLSW Arachis hypogaea HOM05D005558 ORTHO05D006832 3.1e-72 275.8 183 73.8
CAN.G208.43 Capsicum annuum HOM05D005558 ORTHO05D006832 3.1e-72 275.8 188 70.2
Glyma.07G221200 Glycine max HOM05D005558 ORTHO05D006832 3.1e-72 275.8 182 74.7
Prupe.5G000800 Prunus persica HOM05D005558 ORTHO05D006832 3.1e-72 275.8 172 76.2
Migut.N03003 Erythranthe guttata HOM05D005558 ORTHO05D006832 5.3e-72 275.0 196 67.3
MD07G1016000 Malus domestica HOM05D005558 ORTHO05D006832 9.0e-72 274.2 143 87.4
Carub.0001s2052 Capsella rubella HOM05D005558 ORTHO05D006832 1.2e-71 273.9 214 64.5
Zm00001eb234660 Zea mays HOM05D005558 ORTHO05D006832 1.2e-71 273.9 142 84.5
BcaB03g12837 Brassica carinata HOM05D005558 ORTHO05D006832 1.5e-71 273.5 186 71.5
FAN04G1408 Fragaria x ananassa HOM05D005558 ORTHO05D006832 1.5e-71 273.5 195 70.3
Glyma.15G161100 Glycine max HOM05D005558 ORTHO05D006832 2.0e-71 273.1 185 70.3
PGSC0003DMG400029397 Solanum tuberosum HOM05D005558 ORTHO05D006832 2.0e-71 273.1 146 82.2
Hund05339 Selenicereus undatus HOM05D005558 ORTHO05D006832 3.4e-71 272.3 184 70.1
Gorai.009G185800 Gossypium raimondii HOM05D005558 ORTHO05D006832 4.5e-71 271.9 181 72.4
Gohir.A05G177400 Gossypium hirsutum HOM05D005558 ORTHO05D006832 5.8e-71 271.6 181 72.9
Duzib116G0928 Durio zibethinus HOM05D005558 ORTHO05D006832 7.6e-71 271.2 183 69.9
MD06G1057400 Malus domestica HOM05D005558 ORTHO05D006832 7.6e-71 271.2 186 72.0
AL1G34110 Arabidopsis lyrata HOM05D005558 ORTHO05D006832 9.9e-71 270.8 213 64.3
Lalb_Chr05g0219661 Lupinus albus HOM05D005558 ORTHO05D006832 9.9e-71 270.8 147 83.7
EL10Ac7g17248 Beta vulgaris HOM05D005558 ORTHO05D006832 1.3e-70 270.4 182 71.4
Peaxi162Scf00064g01430 Petunia axillaris HOM05D005558 ORTHO05D006832 1.3e-70 270.4 169 74.0
THA.LOC104813721 Tarenaya hassleriana HOM05D005558 ORTHO05D006832 1.3e-70 270.4 195 70.3
Potri.002G001500 Populus trichocarpa HOM05D005558 ORTHO05D006832 1.7e-70 270.0 164 75.6
FAN08G1374 Fragaria x ananassa HOM05D005558 ORTHO05D006832 2.2e-70 269.6 195 69.7
Os02g0187500 Oryza sativa ssp. japonica HOM05D005558 ORTHO05D006832 2.2e-70 269.6 142 83.8
Thecc.08G097300 Theobroma cacao HOM05D005558 ORTHO05D006832 2.2e-70 269.6 185 70.3
Sp1g18730 Schrenkiella parvula HOM05D005558 ORTHO05D006832 2.9e-70 269.2 184 70.7
GSVIVG01013466001 Vitis vinifera HOM05D005558 ORTHO05D006832 2.9e-70 269.2 143 83.9
ClCG11G019260 Citrullus lanatus HOM05D005558 ORTHO05D006832 3.8e-70 268.9 176 71.0
Cc10_g00070 Coffea canephora HOM05D005558 ORTHO05D006832 3.8e-70 268.9 144 81.2
Thhalv10008709m.g Eutrema salsugineum HOM05D005558 ORTHO05D006832 3.8e-70 268.9 186 71.0
Manes.18G000600 Manihot esculenta HOM05D005558 ORTHO05D006832 3.8e-70 268.9 189 69.8
BcaB07g32099 Brassica carinata HOM05D005558 ORTHO05D006832 4.9e-70 268.5 183 71.0
Gohir.D05G180800 Gossypium hirsutum HOM05D005558 ORTHO05D006832 4.9e-70 268.5 181 71.3
Phvul.002G097800 Phaseolus vulgaris HOM05D005558 ORTHO05D006832 4.9e-70 268.5 174 73.6
CANSAT25G0089 Cannabis sativa HOM05D005558 ORTHO05D006832 6.4e-70 268.1 184 69.6
CARHR021510 Cardamine hirsuta HOM05D005558 ORTHO05D006832 6.4e-70 268.1 212 65.1
BcaC05g26014 Brassica carinata HOM05D005558 ORTHO05D006832 1.1e-69 267.3 185 70.3
SGA_v2.0_scaffold19G08925 Striga asiatica HOM05D005558 ORTHO05D006832 1.1e-69 267.3 151 80.1
BraA06t24816Z Brassica rapa HOM05D005558 ORTHO05D006832 1.9e-69 266.5 181 70.2
Eucgr.F01955 Eucalyptus grandis HOM05D005558 ORTHO05D006832 1.9e-69 266.5 249 57.4
Lalb_Chr15g0083971 Lupinus albus HOM05D005558 ORTHO05D006832 2.4e-69 266.2 182 69.8
Rhsim06G0000500 Rhododendron simsii HOM05D005558 ORTHO05D006832 4.2e-69 265.4 233 59.2
Ah.08g212310 Amaranthus hybridus HOM05D005558 ORTHO05D006832 5.5e-69 265.0 179 68.7
TWI12G1391 Tripterygium wilfordii HOM05D005558 ORTHO05D006832 7.1e-69 264.6 178 73.0
A06p17130 Brassica napus HOM05D005558 ORTHO05D006832 9.3e-69 264.2 181 69.6
BcaC07g39074 Brassica carinata HOM05D005558 ORTHO05D006832 2.1e-68 263.1 169 74.6
BolC8t49687H Brassica oleracea HOM05D005558 ORTHO05D006832 2.1e-68 263.1 169 74.6
A08p29100 Brassica napus HOM05D005558 ORTHO05D006832 2.7e-68 262.7 169 74.6
BraA08t34846Z Brassica rapa HOM05D005558 ORTHO05D006832 2.7e-68 262.7 169 74.6
CsaV3_4G037850 Cucumis sativus L. HOM05D005558 ORTHO05D006832 3.5e-68 262.3 178 70.2
HPP92_021698 Vanilla planifolia HOM05D005558 ORTHO05D006832 6.0e-68 261.5 141 80.9
Zm00001eb387340 Zea mays HOM05D005558 ORTHO05D006832 1.0e-67 260.8 142 80.3
AT1G21065 Arabidopsis thaliana HOM05D005558 ORTHO05D006832 1.1e-66 257.3 216 60.6
HPP92_017798 Vanilla planifolia HOM05D005558 ORTHO05D006832 1.5e-66 256.9 149 77.2
SEGI_40156 Sequoiadendron giganteum HOM05D005558 ORTHO05D006832 9.6e-66 254.2 189 64.0
SMO259G0018 Selaginella moellendorffii HOM05D005558 ORTHO05D006832 1.2e-63 247.3 140 77.1
TAR381G1539 Trochodendron aralioides HOM05D005558 ORTHO05D006832 1.0e-62 244.2 161 73.9
Pp3c1_31360 Physcomitrium patens HOM05D005558 ORTHO05D006832 2.2e-62 243.0 144 74.3
Mapoly0002s0034 Marchantia polymorpha HOM05D005558 ORTHO05D006832 6.5e-62 241.5 140 75.0
Atru.chr13.17 Acer truncatum HOM05D005558 ORTHO05D006832 1.0e-59 234.2 161 72.7
Nitab4.5_0001309g0160 Nicotiana tabacum HOM05D005558 ORTHO05D006832 1.3e-59 233.8 127 81.1
ECA238G0376 Erigeron canadensis HOM05D005558 ORTHO05D006832 1.9e-58 229.9 154 70.8
Ciclev10002303m.g Citrus clementina HOM05D005558 ORTHO05D006832 7.4e-58 228.0 182 63.2
HanXRQChr14g0427511 Helianthus annuus HOM05D005558 ORTHO05D006832 9.6e-58 227.6 138 76.8
Sabra02G0001000 Salix brachista HOM05D005558 ORTHO05D006832 2.8e-57 226.1 146 71.9
Actinidia15539 Actinidia chinensis HOM05D005558 ORTHO05D006832 3.1e-56 222.6 121 81.8
C08p20580 Brassica napus HOM05D005558 ORTHO05D006832 3.4e-55 219.2 147 72.1
MELO3C017079.2 Cucumis melo HOM05D005558 ORTHO05D006832 7.6e-55 218.0 119 81.5
BolC5t30678H Brassica oleracea HOM05D000370 ORTHO05D006832 1.0e-54 217.6 140 73.6
Dinv05517 Davidia involucrata HOM05D005558 ORTHO05D006832 1.0e-54 217.6 152 71.7
AUR62041000 Chenopodium quinoa HOM05D005558 ORTHO05D006832 1.3e-54 217.2 171 60.2
Lj4C814G4 Lonicera japonica HOM05D005558 ORTHO05D006832 1.3e-54 217.2 163 66.3
Sed0017561 Sechium edule HOM05D005558 ORTHO05D006832 1.7e-54 216.9 153 66.7
Cre17.g739300 Chlamydomonas reinhardtii HOM05D005558 ORTHO05D006832 3.8e-54 215.7 140 68.6
Phvul.009G240200 Phaseolus vulgaris HOM05D005558 ORTHO05D006832 6.5e-54 214.9 148 71.6
SGA_v2.0_scaffold25G11031 Striga asiatica HOM05D005558 ORTHO05D006832 8.5e-54 214.5 136 74.3
Prupe.5G000700 Prunus persica HOM05D005558 ORTHO05D006832 1.0e-51 207.6 120 80.8
VMungo0251G0776 Vigna mungo HOM05D005558 ORTHO05D006832 2.5e-50 203.0 128 75.8
Os06g0638200 Oryza sativa ssp. japonica HOM05D005558 ORTHO05D006832 3.7e-49 199.1 99 87.9
Haze_22894 Corylus avellana HOM05D005558 ORTHO05D006832 6.5e-46 188.3 187 54.5
vmacro21735 Vaccinium macrocarpon HOM05D005558 ORTHO05D006832 1.1e-40 171.0 154 62.3
TAR376G0283 Trochodendron aralioides HOM05D005558 ORTHO05D006832 1.8e-40 170.2 90 85.6
SMO203G0115 Selaginella moellendorffii HOM05D005558 ORTHO05D006832 3.4e-39 166.0 140 54.3
CDE04G3086 Ceratophyllum demersum HOM05D000433 ORTHO05D000443 2.5e-37 159.8 188 47.9
Oeu000735.2 Olea europaea HOM05D005558 ORTHO05D006832 2.5e-37 159.8 90 80.0
SEGI_39286 Sequoiadendron giganteum HOM05D005558 ORTHO05D006832 2.5e-37 159.8 140 52.9
Pp3c2_25680 Physcomitrium patens HOM05D005558 ORTHO05D006832 3.2e-37 159.5 139 53.2
Peaxi162Scf00064g01422 Petunia axillaris HOM05D005558 ORTHO05D006832 4.2e-37 159.1 116 64.7
Mapoly0065s0101 Marchantia polymorpha HOM05D005558 ORTHO05D006832 1.2e-36 157.5 140 54.3
Cre01.g043100 Chlamydomonas reinhardtii HOM05D005558 ORTHO05D006832 8.8e-35 151.4 153 49.0
SalBow6G6347 Salvia bowleyana HOM05D005558 ORTHO05D006832 1.1e-32 144.4 199 43.7
Cfa023908 Carpinus fangiana HOM05D005558 ORTHO05D006832 9.1e-32 141.4 206 39.8
CBR_g570 Chara braunii HOM05D005558 ORTHO05D006832 8.5e-30 134.8 85 70.6
AL8G17720 Arabidopsis lyrata HOM05D005558 ORTHO05D006832 1.2e-26 124.4 72 81.9
AL5G16180 Arabidopsis lyrata HOM05D005558 ORTHO05D006832 9.7e-26 121.3 70 81.4
MCO09G054 Micromonas commoda HOM05D005558 ORTHO05D006832 8.2e-25 118.2 133 47.4
C05p19780 Brassica napus HOM05D005558 ORTHO05D006832 2.0e-23 113.6 59 83.1
HPP92_021704 Vanilla planifolia HOM05D005558 ORTHO05D006832 3.2e-21 106.3 118 46.6
BcaC07g39073 Brassica carinata HOM05D005558 ORTHO05D006832 1.8e-19 100.5 53 83.0
Aa31LG7G5210 Aethionema arabicum HOM05D005558 ORTHO05D006832 4.8e-17 92.4 219 34.2
AagrBONN_evm.TU.Sc2ySwM_344.2923 Anthoceros agrestis HOM05D005558 ORTHO05D006832 5.5e-13 79.0 80 48.8
PRCOL_00001425 Prasinoderma coloniale HOM05D005558 ORTHO05D006832 4.0e-11 72.8 154 31.2
Cre09.g396850 Chlamydomonas reinhardtii HOM05D005558 ORTHO05D034498 2.6e-10 70.1 141 33.3
Cpa.g.sc36.94 Carica papaya HOM05D005558 ORTHO05D006832 1.7e-09 67.4 121 38.0
Cpa.g.sc36.93 Carica papaya HOM05D005558 ORTHO05D006832 3.7e-09 66.2 31 87.1
DCAR_022964 Daucus carota HOM05D005558 ORTHO05D006832 1.4e-08 64.3 78 48.7


User provided reference genes

Program Settings