Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G1019 Papaver somniferum HOM05D004579 ORTHO05D005376 2.4e-105 385.6 200 100.0
PSO210G6474 Papaver somniferum HOM05D004579 ORTHO05D005376 1.5e-83 313.2 206 82.5
PSO063G4337 Papaver somniferum HOM05D004579 ORTHO05D005376 1.4e-81 306.6 251 69.7
PSO210G6518 Papaver somniferum HOM05D004579 ORTHO05D005376 3.4e-72 275.4 206 74.8
GSVIVG01035344001 Vitis vinifera HOM05D004579 ORTHO05D005376 2.1e-45 186.4 177 57.1
TAR383G0831 Trochodendron aralioides HOM05D004579 ORTHO05D005376 8.9e-44 181.0 177 55.9
CSS0030937 Camellia sinensis var. sinensis HOM05D004579 ORTHO05D005376 9.8e-43 177.6 170 54.1
Dinv23423 Davidia involucrata HOM05D004579 ORTHO05D005376 9.8e-43 177.6 170 58.2
Actinidia14703 Actinidia chinensis HOM05D004579 ORTHO05D005376 1.7e-42 176.8 175 53.7
Aqoxy7G00927 Aquilegia oxysepala HOM05D004579 ORTHO05D005376 1.4e-41 173.7 183 54.1
MBI01_g16584_MAGBIO Magnolia biondii HOM05D004579 ORTHO05D005376 5.4e-41 171.8 185 51.9
SGA_v2.0_scaffold88G27218 Striga asiatica HOM05D004579 ORTHO05D005376 2.7e-40 169.5 164 54.9
Atru.chr7.2020 Acer truncatum HOM05D004579 ORTHO05D005376 3.5e-40 169.1 200 47.5
Thecc.09G051200 Theobroma cacao HOM05D004579 ORTHO05D005376 7.8e-40 167.9 179 51.4
MSTRG.11672 Avicennia marina HOM05D004579 ORTHO05D005376 1.7e-39 166.8 170 52.4
Dinv27966 Davidia involucrata HOM05D004579 ORTHO05D005376 5.0e-39 165.2 161 53.4
Potri.006G232800 Populus trichocarpa HOM05D004579 ORTHO05D005376 5.0e-39 165.2 178 51.1
TWI34G1837 Tripterygium wilfordii HOM05D004579 ORTHO05D005376 8.6e-39 164.5 173 51.4
DCAR_019057 Daucus carota HOM05D004579 ORTHO05D005376 1.1e-38 164.1 167 53.9
Nn8g38954 Nelumbo nucifera HOM05D004579 ORTHO05D005376 1.9e-38 163.3 174 49.4
Duzib168G1792 Durio zibethinus HOM05D004579 ORTHO05D005376 2.5e-38 162.9 177 49.7
Sc09g0009680 Simmondsia chinensis HOM05D004579 ORTHO05D005376 2.5e-38 162.9 169 53.8
Duzib187G0056 Durio zibethinus HOM05D004579 ORTHO05D005376 7.3e-38 161.4 177 49.2
Sabra06G0181300 Salix brachista HOM05D004579 ORTHO05D005376 7.3e-38 161.4 178 51.7
Nitab4.5_0008290g0030 Nicotiana tabacum HOM05D004579 ORTHO05D005376 1.2e-37 160.6 165 53.9
Gorai.009G046700 Gossypium raimondii HOM05D004579 ORTHO05D005376 1.6e-37 160.2 179 50.8
CANSAT25G0619 Cannabis sativa HOM05D004579 ORTHO05D005376 2.1e-37 159.8 180 46.1
CDE02G1740 Ceratophyllum demersum HOM05D004579 ORTHO05D005376 2.1e-37 159.8 167 46.7
Manes.03G046600 Manihot esculenta HOM05D004579 ORTHO05D005376 2.1e-37 159.8 169 49.1
HanXRQChr09g0251171 Helianthus annuus HOM05D004579 ORTHO05D005376 2.8e-37 159.5 172 51.2
PGR031G0410 Punica granatum HOM05D004579 ORTHO05D005376 2.8e-37 159.5 177 50.3
Nitab4.5_0006174g0020 Nicotiana tabacum HOM05D004579 ORTHO05D005376 3.6e-37 159.1 164 53.0
Prupe.1G414900 Prunus persica HOM05D004579 ORTHO05D005376 3.6e-37 159.1 177 47.5
Ca_02416_v3 Cicer arietinum L. HOM05D004579 ORTHO05D005376 4.7e-37 158.7 171 50.9
Cc08_g10350 Coffea canephora HOM05D004579 ORTHO05D005376 4.7e-37 158.7 165 51.5
CAN.G1226.13 Capsicum annuum HOM05D004579 ORTHO05D005376 8.0e-37 157.9 167 55.1
Ca_15870_v3 Cicer arietinum L. HOM05D004579 ORTHO05D005376 8.0e-37 157.9 204 45.6
Medtr1g016630 Medicago truncatula HOM05D004579 ORTHO05D005376 8.0e-37 157.9 178 49.4
PGSC0003DMG400005151 Solanum tuberosum HOM05D004579 ORTHO05D005376 8.0e-37 157.9 167 52.7
Manes.16G077900 Manihot esculenta HOM05D004579 ORTHO05D005376 1.0e-36 157.5 173 49.1
Solyc04g080350.4 Solanum lycopersicum HOM05D004579 ORTHO05D005376 1.0e-36 157.5 167 52.7
Sopen04g033940 Solanum pennellii HOM05D004579 ORTHO05D005376 1.0e-36 157.5 167 52.7
Hma1.2p1_1266F.1_g271430 Hydrangea macrophylla HOM05D004579 ORTHO05D005376 1.4e-36 157.1 167 50.9
Nitab4.5_0000359g0090 Nicotiana tabacum HOM05D004579 ORTHO05D005376 1.4e-36 157.1 164 52.4
TWI63G0708 Tripterygium wilfordii HOM05D004579 ORTHO05D005376 1.4e-36 157.1 173 51.4
Lsat_1_v5_gn_6_7421 Lactuca sativa HOM05D004579 ORTHO05D005376 2.3e-36 156.4 177 51.4
Lj1g0026801 Lotus japonicus HOM05D004579 ORTHO05D005376 2.3e-36 156.4 184 47.3
Psat5g036520 Pisum sativum HOM05D004579 ORTHO05D005376 2.3e-36 156.4 172 50.6
Ah.11g044630 Amaranthus hybridus HOM05D004579 ORTHO05D005376 3.0e-36 156.0 178 50.0
TPR.G13109 Trifolium pratense HOM05D004579 ORTHO05D005376 3.0e-36 156.0 172 51.2
unitig_736.g22340 Utricularia gibba HOM05D004579 ORTHO05D005376 3.0e-36 156.0 169 51.5
Gohir.D05G045500 Gossypium hirsutum HOM05D004579 ORTHO05D005376 4.0e-36 155.6 176 50.6
Glyma.04G049800 Glycine max HOM05D004579 ORTHO05D005376 5.2e-36 155.2 165 50.3
HPP92_014384 Vanilla planifolia HOM05D004579 ORTHO05D005376 5.2e-36 155.2 175 51.4
Cfa017933 Carpinus fangiana HOM05D004579 ORTHO05D005376 8.9e-36 154.5 178 48.9
Migut.A00154 Erythranthe guttata HOM05D004579 ORTHO05D005376 8.9e-36 154.5 170 50.6
Glyma.06G050800 Glycine max HOM05D004579 ORTHO05D005376 1.2e-35 154.1 165 49.1
Rhsim07G0143600 Rhododendron simsii HOM05D004579 ORTHO05D005376 1.2e-35 154.1 163 49.7
CiPaw.15G041800 Carya illinoinensis HOM05D004579 ORTHO05D005376 1.5e-35 153.7 209 43.5
QL07p000612 Quercus lobata HOM05D004579 ORTHO05D005376 1.5e-35 153.7 179 48.6
Peaxi162Scf00436g00719 Petunia axillaris HOM05D004579 ORTHO05D005376 2.0e-35 153.3 162 50.0
TAR626G1184 Trochodendron aralioides HOM05D004579 ORTHO05D005376 9.8e-35 151.0 133 61.7
arahy.Tifrunner.gnm1.ann1.Y2NPND Arachis hypogaea HOM05D004579 ORTHO05D005376 1.3e-34 150.6 175 52.0
SalBow4G3199 Salvia bowleyana HOM05D004579 ORTHO05D005376 1.7e-34 150.2 176 48.3
Gohir.D07G022900 Gossypium hirsutum HOM05D004579 ORTHO05D005376 2.2e-34 149.8 168 49.4
arahy.Tifrunner.gnm1.ann1.A3GFYF Arachis hypogaea HOM05D004579 ORTHO05D005376 2.9e-34 149.4 175 51.4
Eucgr.C00634 Eucalyptus grandis HOM05D004579 ORTHO05D005376 2.9e-34 149.4 176 46.6
Lj5g0003794 Lotus japonicus HOM05D004579 ORTHO05D005376 3.7e-34 149.1 162 53.1
QL02p103256 Quercus lobata HOM05D004579 ORTHO05D005376 3.7e-34 149.1 177 48.6
THA.LOC104811250 Tarenaya hassleriana HOM05D004579 ORTHO05D005376 3.7e-34 149.1 170 48.2
Gorai.001G023600 Gossypium raimondii HOM05D004579 ORTHO05D005376 4.9e-34 148.7 168 48.8
COL.COLO4_21028 Corchorus olitorius HOM05D004579 ORTHO05D005376 6.4e-34 148.3 159 49.7
Ciclev10009210m.g Citrus clementina HOM05D004579 ORTHO05D005376 8.3e-34 147.9 182 45.1
HanXRQChr08g0226451 Helianthus annuus HOM05D004579 ORTHO05D005376 8.3e-34 147.9 168 50.0
HanXRQChr08g0226601 Helianthus annuus HOM05D004579 ORTHO05D005376 8.3e-34 147.9 168 50.0
Lalb_Chr22g0355991 Lupinus albus HOM05D004579 ORTHO05D005376 8.3e-34 147.9 180 46.7
Zm00001eb356770 Zea mays HOM05D004579 ORTHO05D005376 1.1e-33 147.5 178 46.1
Os01g0559200 Oryza sativa ssp. japonica HOM05D004579 ORTHO05D005376 1.8e-33 146.7 184 47.8
Gohir.A05G043900 Gossypium hirsutum HOM05D004579 ORTHO05D005376 2.4e-33 146.4 200 45.0
MELO3C022510.2 Cucumis melo HOM05D004579 ORTHO05D005376 3.2e-33 146.0 167 48.5
BraA05t21726Z Brassica rapa HOM05D004579 ORTHO05D005376 4.1e-33 145.6 165 48.5
EL10Ac2g03929 Beta vulgaris HOM05D004579 ORTHO05D005376 5.4e-33 145.2 163 50.3
ECA233G0431 Erigeron canadensis HOM05D004579 ORTHO05D005376 5.4e-33 145.2 177 47.5
Sed0005208 Sechium edule HOM05D004579 ORTHO05D005376 5.4e-33 145.2 169 46.2
Nn6g35393 Nelumbo nucifera HOM05D004579 ORTHO05D005376 7.0e-33 144.8 168 47.0
AUR62022041 Chenopodium quinoa HOM05D004579 ORTHO05D005376 9.2e-33 144.4 169 44.4
ClCG06G000280 Citrullus lanatus HOM05D004579 ORTHO05D005376 9.2e-33 144.4 161 47.2
Oeu037326.2 Olea europaea HOM05D004579 ORTHO05D005376 1.2e-32 144.1 198 43.4
Psat6g019640 Pisum sativum HOM05D004579 ORTHO05D005376 1.6e-32 143.7 169 45.6
arahy.Tifrunner.gnm1.ann1.C5JVH4 Arachis hypogaea HOM05D004579 ORTHO05D005376 2.0e-32 143.3 172 48.8
BcaC05g28330 Brassica carinata HOM05D004579 ORTHO05D005376 2.0e-32 143.3 167 47.9
C05p43910 Brassica napus HOM05D004579 ORTHO05D005376 2.0e-32 143.3 167 47.9
BolC5t33107H Brassica oleracea HOM05D004579 ORTHO05D005376 2.0e-32 143.3 167 47.9
Hund03357 Selenicereus undatus HOM05D004579 ORTHO05D005376 2.0e-32 143.3 209 45.5
arahy.Tifrunner.gnm1.ann1.XC2JTE Arachis hypogaea HOM05D004579 ORTHO05D005376 2.7e-32 142.9 172 48.8
Thhalv10021403m.g Eutrema salsugineum HOM05D004579 ORTHO05D005376 2.7e-32 142.9 164 47.6
Lalb_Chr24g0399591 Lupinus albus HOM05D004579 ORTHO05D005376 3.5e-32 142.5 174 45.4
Phvul.009G076200 Phaseolus vulgaris HOM05D004579 ORTHO05D005376 3.5e-32 142.5 160 48.1
ATR0789G072 Amborella trichopoda HOM05D004579 ORTHO05D005376 4.6e-32 142.1 173 45.1
A05p28470 Brassica napus HOM05D004579 ORTHO05D005376 7.8e-32 141.4 165 47.3
FvH4_2g32180 Fragaria vesca HOM05D004579 ORTHO05D005376 7.8e-32 141.4 185 42.7
FAN24G0041 Fragaria x ananassa HOM05D004579 ORTHO05D005376 7.8e-32 141.4 185 42.7
Sed0027918 Sechium edule HOM05D004579 ORTHO05D005376 1.0e-31 141.0 161 46.0
FAN20G3218 Fragaria x ananassa HOM05D004579 ORTHO05D005376 1.3e-31 140.6 176 46.0
CARHR096140 Cardamine hirsuta HOM05D004579 ORTHO05D005376 3.0e-31 139.4 200 46.5
FAN27G3258 Fragaria x ananassa HOM05D004579 ORTHO05D005376 3.0e-31 139.4 176 44.9
CSS0042880 Camellia sinensis var. sinensis HOM05D004579 ORTHO05D005376 5.0e-31 138.7 146 51.4
FAN15G2153 Fragaria x ananassa HOM05D004579 ORTHO05D005376 5.0e-31 138.7 183 44.3
Glyma.14G092900 Glycine max HOM05D004579 ORTHO05D005376 5.0e-31 138.7 170 47.1
Oeu018654.1 Olea europaea HOM05D004579 ORTHO05D005376 1.5e-30 137.1 91 70.3
BcaB06g26108 Brassica carinata HOM05D004579 ORTHO05D005376 2.5e-30 136.3 162 46.3
PGR142G1482 Punica granatum HOM05D004579 ORTHO05D005376 2.5e-30 136.3 176 43.2
AT3G20430 Arabidopsis thaliana HOM05D004579 ORTHO05D005376 3.3e-30 136.0 189 49.2
CsaV3_6G006070 Cucumis sativus L. HOM05D004579 ORTHO05D005376 3.3e-30 136.0 159 47.8
VMungo0647G1140 Vigna mungo HOM05D004579 ORTHO05D005376 4.3e-30 135.6 172 45.9
MSTRG.25939 Avicennia marina HOM05D004579 ORTHO05D005376 9.5e-30 134.4 90 70.0
Gohir.A07G022140 Gossypium hirsutum HOM05D004579 ORTHO05D005376 9.5e-30 134.4 93 68.8
Sp3g18440 Schrenkiella parvula HOM05D004579 ORTHO05D005376 1.6e-29 133.7 165 46.1
Aa31LG8G7240 Aethionema arabicum HOM05D004579 ORTHO05D005376 2.1e-29 133.3 166 45.8
Haze_18215 Corylus avellana HOM05D004579 ORTHO05D005376 1.4e-28 130.6 237 37.1
AL3G34150 Arabidopsis lyrata HOM05D004579 ORTHO05D005376 1.8e-28 130.2 154 48.7
Carub.0003s2037 Capsella rubella HOM05D004579 ORTHO05D005376 1.8e-28 130.2 160 46.9
FAN24G1203 Fragaria x ananassa HOM05D004579 ORTHO05D005376 2.2e-26 123.2 165 42.4
vmacro05280 Vaccinium macrocarpon HOM05D004579 ORTHO05D005376 1.4e-25 120.6 231 34.6
VMungo1309G2710 Vigna mungo HOM05D004579 ORTHO05D005376 1.4e-25 120.6 167 44.9
SEGI_10906 Sequoiadendron giganteum HOM05D004579 ORTHO05D005376 2.4e-25 119.8 101 55.4
PSO017G0877 Papaver somniferum HOM05D004579 ORTHO05D005376 3.2e-25 119.4 99 75.8
PSO017G5975 Papaver somniferum HOM05D004579 ORTHO05D005376 3.2e-25 119.4 99 75.8
TPR.G25353 Trifolium pratense HOM05D004579 ORTHO05D005376 2.3e-20 103.2 127 46.5
Hund19474 Selenicereus undatus HOM05D004579 ORTHO05D005376 1.5e-19 100.5 272 29.8
RcHm_v2.0_Chr6g0310501 Rosa chinensis HOM05D004579 ORTHO05D005376 9.9e-19 97.8 141 46.1
AUR62009186 Chenopodium quinoa HOM05D004579 ORTHO05D005376 6.4e-18 95.1 130 43.1
CBR_g36456 Chara braunii HOM05D004579 ORTHO05D005376 5.4e-17 92.0 94 45.7
Mapoly0091s0021 Marchantia polymorpha HOM05D004579 ORTHO05D005376 7.1e-17 91.7 96 49.0
AagrBONN_evm.TU.Sc2ySwM_117.2939 Anthoceros agrestis HOM05D004579 ORTHO05D005376 2.1e-16 90.1 92 50.0
PGSC0003DMG400032806 Solanum tuberosum HOM05D004579 ORTHO05D005376 3.0e-15 86.3 58 72.4
Phvul.001G033700 Phaseolus vulgaris HOM05D004579 ORTHO05D005376 3.9e-15 85.9 146 39.0
Pp3c10_2240 Physcomitrium patens HOM05D004579 ORTHO05D005376 1.1e-14 84.3 95 46.3
Hma1.2p1_1944F.1_g308530 Hydrangea macrophylla HOM05D004579 ORTHO05D005376 3.1e-12 76.3 125 39.2
vmacro00165 Vaccinium macrocarpon HOM05D004579 ORTHO05D005376 6.4e-10 68.6 171 31.0
Cpa.g.sc84.21 Carica papaya HOM05D004579 ORTHO05D005376 4.1e-09 65.9 169 29.0
MCO09G383 Micromonas commoda HOM05D004579 ORTHO05D005376 6.6e-07 58.5 90 35.6
TPR.G25355 Trifolium pratense HOM05D004579 ORTHO05D005376 1.5e-06 57.4 44 56.8
Actinidia18195 Actinidia chinensis HOM05D004579 ORTHO05D005376 2.5e-06 56.6 43 58.1
QL03p011522 Quercus lobata HOM05D004579 ORTHO05D005376 2.5e-06 56.6 42 61.9
vmacro00163 Vaccinium macrocarpon HOM05D004579 ORTHO05D005376 2.5e-06 56.6 103 35.9
arahy.Tifrunner.gnm1.ann1.E1I8FT Arachis hypogaea HOM05D004579 ORTHO05D005376 4.3e-06 55.8 41 58.5


User provided reference genes

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