Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G0987 Papaver somniferum HOM05D000056 ORTHO05D000019 1.0e-114 416.8 219 100.0
PSO017G7187 Papaver somniferum HOM05D000056 ORTHO05D000019 1.7e-64 250.0 206 66.0
PSO210G1277 Papaver somniferum HOM05D000056 ORTHO05D000019 6.1e-54 214.9 211 57.8
PSO063G5701 Papaver somniferum HOM05D000056 ORTHO05D000019 2.4e-50 203.0 211 54.5
PSO782G4721 Papaver somniferum HOM05D000056 ORTHO05D000019 2.1e-46 189.9 215 51.6
PSO781G0149 Papaver somniferum HOM05D000056 ORTHO05D000019 1.7e-35 153.7 213 46.9
PSO782G2438 Papaver somniferum HOM05D000056 ORTHO05D000019 1.7e-35 153.7 211 46.4
PSO832G4420 Papaver somniferum HOM05D000056 ORTHO05D000019 5.3e-34 148.7 211 44.5
PSO135G0475 Papaver somniferum HOM05D000056 ORTHO05D000019 3.8e-32 142.5 216 42.6
PSO724G0975 Papaver somniferum HOM05D000056 ORTHO05D000019 6.5e-32 141.7 216 42.6
PSO407G0410 Papaver somniferum HOM05D000056 ORTHO05D000019 8.5e-32 141.4 214 44.9
PSO601G0030 Papaver somniferum HOM05D000056 ORTHO05D000019 2.3e-29 133.3 214 41.1
PSO210G4708 Papaver somniferum HOM05D000056 ORTHO05D000019 3.3e-28 129.4 202 41.1
PSO210G5879 Papaver somniferum HOM05D000056 ORTHO05D000019 3.3e-28 129.4 191 42.9
Aqoxy5G02991 Aquilegia oxysepala HOM05D000056 ORTHO05D000019 5.5e-23 112.1 215 38.1
PSO837G0011 Papaver somniferum HOM05D000056 ORTHO05D000019 7.0e-18 95.1 219 32.0
PSO478G0589 Papaver somniferum HOM05D000056 ORTHO05D000019 3.5e-17 92.8 163 37.4
PSO063G6000 Papaver somniferum HOM05D000056 ORTHO05D000019 2.5e-15 86.7 134 41.8
TWI18G0026 Tripterygium wilfordii HOM05D000056 ORTHO05D000019 3.2e-15 86.3 217 33.6
PSO601G0017 Papaver somniferum HOM05D000056 ORTHO05D000019 5.5e-15 85.5 188 32.4
TWI18G0590 Tripterygium wilfordii HOM05D000056 ORTHO05D000019 5.5e-15 85.5 219 33.3
PSO832G1589 Papaver somniferum HOM05D000056 ORTHO05D000019 4.7e-14 82.4 210 33.8
PSO724G0101 Papaver somniferum HOM05D000056 ORTHO05D000019 6.1e-14 82.0 212 33.0
PSO210G1468 Papaver somniferum HOM05D000056 ORTHO05D000019 2.3e-13 80.1 210 32.9
PSO210G6114 Papaver somniferum HOM05D000056 ORTHO05D000019 2.3e-13 80.1 210 32.9
PSO478G2655 Papaver somniferum HOM05D000056 ORTHO05D000019 2.3e-13 80.1 210 32.4
PSO591G0208 Papaver somniferum HOM05D000056 ORTHO05D000019 4.0e-13 79.3 210 33.3
PSO782G4713 Papaver somniferum HOM05D000056 ORTHO05D000019 5.2e-13 79.0 210 31.9
TAR622G0654 Trochodendron aralioides HOM05D000056 ORTHO05D000019 6.8e-13 78.6 231 31.6
TWI18G0324 Tripterygium wilfordii HOM05D000056 ORTHO05D000019 8.8e-13 78.2 219 31.1
Aqoxy5G03012 Aquilegia oxysepala HOM05D000056 ORTHO05D000019 5.7e-12 75.5 235 28.5
Eucgr.E03393 Eucalyptus grandis HOM05D000056 ORTHO05D000019 8.3e-11 71.6 199 29.6
PSO170G4758 Papaver somniferum HOM05D000056 ORTHO05D000019 1.1e-10 71.2 196 28.1
MBI07_g11069_MAGBIO Magnolia biondii HOM05D000056 ORTHO05D000019 2.4e-10 70.1 198 33.8
PSO063G6556 Papaver somniferum HOM05D000056 ORTHO05D000019 2.4e-10 70.1 242 29.3
RcHm_v2.0_Chr4g0427551 Rosa chinensis HOM05D000056 ORTHO05D000019 2.4e-10 70.1 220 30.0
Zm00001eb310380 Zea mays HOM05D000056 ORTHO05D000019 5.4e-10 68.9 202 30.7
Eucgr.K03612 Eucalyptus grandis HOM05D000056 ORTHO05D000019 7.0e-10 68.6 195 31.8
vmacro04560 Vaccinium macrocarpon HOM05D000056 ORTHO05D000019 1.2e-09 67.8 221 29.0
Eucgr.E03403 Eucalyptus grandis HOM05D000056 ORTHO05D000019 1.6e-09 67.4 199 29.1
Eucgr.J01692 Eucalyptus grandis HOM05D000056 ORTHO05D000019 2.0e-09 67.0 224 32.1
PSO601G0027 Papaver somniferum HOM05D000056 ORTHO05D000019 2.7e-09 66.6 146 34.2
Eucgr.J01665 Eucalyptus grandis HOM05D000056 ORTHO05D000019 3.5e-09 66.2 237 31.2
Cfa009479 Carpinus fangiana HOM05D000056 ORTHO05D000019 4.5e-09 65.9 225 30.7
Manes.09G172601 Manihot esculenta HOM05D000056 ORTHO05D000019 4.5e-09 65.9 206 32.0
Cfa016718 Carpinus fangiana HOM05D000056 ORTHO05D000019 5.9e-09 65.5 232 28.9
Eucgr.J01703 Eucalyptus grandis HOM05D000056 ORTHO05D000019 5.9e-09 65.5 194 33.5
PSO339G3551 Papaver somniferum HOM05D000056 ORTHO05D000019 5.9e-09 65.5 227 30.0
Sc13g0001230 Simmondsia chinensis HOM05D000056 ORTHO05D000019 5.9e-09 65.5 221 28.1
vmacro09879 Vaccinium macrocarpon HOM05D000056 ORTHO05D000019 5.9e-09 65.5 225 30.7
RcHm_v2.0_Chr4g0428321 Rosa chinensis HOM05D000056 ORTHO05D000019 7.8e-09 65.1 223 29.6
Potri.003G159300 Populus trichocarpa HOM05D000056 ORTHO05D000019 1.0e-08 64.7 200 31.5
Cc08_g10470 Coffea canephora HOM05D000056 ORTHO05D000019 1.3e-08 64.3 199 33.2
Manes.08G098900 Manihot esculenta HOM05D000056 ORTHO05D000019 1.3e-08 64.3 226 31.0
PSO017G2738 Papaver somniferum HOM05D000056 ORTHO05D000019 1.3e-08 64.3 227 29.1
DCAR_002032 Daucus carota HOM05D000056 ORTHO05D000019 1.7e-08 63.9 218 29.8
DCAR_029447 Daucus carota HOM05D000038 ORTHO05D000143 1.7e-08 63.9 223 28.3
Eucgr.E03391 Eucalyptus grandis HOM05D000056 ORTHO05D000019 1.7e-08 63.9 200 28.0
GSVIVG01033580001 Vitis vinifera HOM05D000056 ORTHO05D000019 1.7e-08 63.9 226 30.5
Eucgr.J01668 Eucalyptus grandis HOM05D000056 ORTHO05D000019 2.3e-08 63.5 229 28.8
MD16G1130500 Malus domestica HOM05D000056 ORTHO05D000019 2.9e-08 63.2 199 30.7
Sabra03G0115700 Salix brachista HOM05D000056 ORTHO05D000019 2.9e-08 63.2 200 31.5
HPP92_021573 Vanilla planifolia HOM05D000056 ORTHO05D000019 2.9e-08 63.2 206 30.6
Actinidia11937 Actinidia chinensis HOM05D000056 ORTHO05D000019 3.8e-08 62.8 217 27.2
Cc00_g32480 Coffea canephora HOM05D000056 ORTHO05D000019 3.8e-08 62.8 230 27.8
Sabra01G0050200 Salix brachista HOM05D000056 ORTHO05D000019 3.8e-08 62.8 197 30.5
Thecc.01G234400 Theobroma cacao HOM05D000056 ORTHO05D000019 3.8e-08 62.8 238 29.8
CiPaw.05G097300 Carya illinoinensis HOM05D000056 ORTHO05D000019 5.0e-08 62.4 222 29.7
Manes.04G007300 Manihot esculenta HOM05D000056 ORTHO05D000019 5.0e-08 62.4 233 28.8
Nitab4.5_0000408g0010 Nicotiana tabacum HOM05D000056 ORTHO05D000019 5.0e-08 62.4 241 27.0
Duzib264G0530 Durio zibethinus HOM05D000056 ORTHO05D000019 6.6e-08 62.0 237 27.8
Gohir.A09G003400 Gossypium hirsutum HOM05D000056 ORTHO05D000019 6.6e-08 62.0 214 33.2
Dinv05113 Davidia involucrata HOM05D000056 ORTHO05D000019 1.1e-07 61.2 231 29.9
Eucgr.J01688 Eucalyptus grandis HOM05D000056 ORTHO05D000019 1.1e-07 61.2 228 30.7
Ciclev10028367m.g Citrus clementina HOM05D000056 ORTHO05D000019 1.5e-07 60.8 231 27.7
Actinidia33988 Actinidia chinensis HOM05D000056 ORTHO05D000019 1.9e-07 60.5 230 28.7
Carub.0004s1824 Capsella rubella HOM05D000056 ORTHO05D000019 1.9e-07 60.5 236 26.3
CiPaw.09G044500 Carya illinoinensis HOM05D000056 ORTHO05D000019 1.9e-07 60.5 232 30.2
Eucgr.B03889 Eucalyptus grandis HOM05D000056 ORTHO05D000019 1.9e-07 60.5 229 26.2
PGR119G1826 Punica granatum HOM05D000056 ORTHO05D000019 1.9e-07 60.5 201 30.8
HanXRQChr08g0224751 Helianthus annuus HOM05D000056 ORTHO05D000019 2.5e-07 60.1 227 30.0
Hma1.2p1_0738F.1_g211050 Hydrangea macrophylla HOM05D000056 ORTHO05D000019 2.5e-07 60.1 228 27.2
CDE02G2960 Ceratophyllum demersum HOM05D000056 ORTHO05D000019 3.3e-07 59.7 205 29.3
Eucgr.J01673 Eucalyptus grandis HOM05D000056 ORTHO05D000019 3.3e-07 59.7 211 29.4
BraA10t43910Z Brassica rapa HOM05D000056 ORTHO05D000019 4.3e-07 59.3 199 30.2
Cfa011362 Carpinus fangiana HOM05D000056 ORTHO05D000019 4.3e-07 59.3 222 27.9
Lj1A93G46 Lonicera japonica HOM05D000056 ORTHO05D000019 4.3e-07 59.3 182 28.0
Rhsim12G0027400 Rhododendron simsii HOM05D000056 ORTHO05D000019 4.3e-07 59.3 207 28.5
CARHR191020 Cardamine hirsuta HOM05D000056 ORTHO05D000019 5.6e-07 58.9 206 29.1
Eucgr.E01332 Eucalyptus grandis HOM05D000056 ORTHO05D000019 5.6e-07 58.9 200 26.0
Eucgr.J01689 Eucalyptus grandis HOM05D000056 ORTHO05D000019 5.6e-07 58.9 221 29.9
THA.LOC104801412 Tarenaya hassleriana HOM05D000056 ORTHO05D000019 5.6e-07 58.9 220 26.4
TWI74G1651 Tripterygium wilfordii HOM05D000056 ORTHO05D000019 5.6e-07 58.9 199 28.1
Rhsim08G0187500 Rhododendron simsii HOM05D000056 ORTHO05D000019 7.3e-07 58.5 237 28.3
ECA233G4851 Erigeron canadensis HOM05D000056 ORTHO05D000019 9.5e-07 58.2 225 28.0
Zm00001eb197750 Zea mays HOM05D000056 ORTHO05D000019 9.5e-07 58.2 196 28.1
CARHR130730 Cardamine hirsuta HOM05D000056 ORTHO05D000019 1.2e-06 57.8 235 23.8
Dinv13802 Davidia involucrata HOM05D000056 ORTHO05D000019 1.2e-06 57.8 234 28.2
Phvul.004G068700 Phaseolus vulgaris HOM05D000056 ORTHO05D000019 1.2e-06 57.8 248 27.8
RcHm_v2.0_Chr4g0428331 Rosa chinensis HOM05D000056 ORTHO05D000019 1.2e-06 57.8 190 31.6
Solyc10g079520.1 Solanum lycopersicum HOM05D000056 ORTHO05D000019 1.2e-06 57.8 176 31.8
Solyc10g079530.2 Solanum lycopersicum HOM05D000056 ORTHO05D000019 1.2e-06 57.8 176 31.8
Cfa016711 Carpinus fangiana HOM05D000056 ORTHO05D000019 1.6e-06 57.4 240 27.5
Lj1A713T56 Lonicera japonica HOM05D000056 ORTHO05D000019 1.6e-06 57.4 201 29.4
MBI07_g44696_MAGBIO Magnolia biondii HOM05D000056 ORTHO05D000019 1.6e-06 57.4 229 24.9
Os12g0481000 Oryza sativa ssp. japonica HOM05D000056 ORTHO05D000019 1.6e-06 57.4 207 28.0
Cfa016720 Carpinus fangiana HOM05D000056 ORTHO05D000019 2.1e-06 57.0 236 27.1
CDE06G2500 Ceratophyllum demersum HOM05D000056 ORTHO05D000019 2.1e-06 57.0 207 29.0
Ciclev10005120m.g Citrus clementina HOM05D000056 ORTHO05D000019 2.1e-06 57.0 186 25.8
Cc08_g10490 Coffea canephora HOM05D000056 ORTHO05D000019 2.1e-06 57.0 255 26.7
Lj7C444T1 Lonicera japonica HOM05D000991 ORTHO05D000848 2.1e-06 57.0 156 28.2
Lj7C446G0 Lonicera japonica HOM05D000991 ORTHO05D000848 2.1e-06 57.0 156 28.8
Nn3g16183 Nelumbo nucifera HOM05D000056 ORTHO05D000019 2.1e-06 57.0 229 27.9
Actinidia11921 Actinidia chinensis HOM05D000056 ORTHO05D000019 2.8e-06 56.6 219 26.0
COL.COLO4_19963 Corchorus olitorius HOM05D000056 ORTHO05D000019 2.8e-06 56.6 223 26.5
Eucgr.B03888 Eucalyptus grandis HOM05D000056 ORTHO05D000019 2.8e-06 56.6 202 28.2
Lj7P449T12 Lonicera japonica HOM05D000991 ORTHO05D000848 2.8e-06 56.6 136 29.4
GSVIVG01033794001 Vitis vinifera HOM05D000056 ORTHO05D000019 2.8e-06 56.6 223 24.7
Cc11_g06710 Coffea canephora HOM05D000056 ORTHO05D000019 3.6e-06 56.2 239 24.3
Eucgr.J01732 Eucalyptus grandis HOM05D000056 ORTHO05D000019 3.6e-06 56.2 184 30.4
Eucgr.K02070 Eucalyptus grandis HOM05D000056 ORTHO05D000019 3.6e-06 56.2 236 28.4
PSO384G1701 Papaver somniferum HOM05D000056 ORTHO05D000019 3.6e-06 56.2 250 27.6
QL01p013562 Quercus lobata HOM05D000056 ORTHO05D000019 3.6e-06 56.2 210 25.7
vmacro16121 Vaccinium macrocarpon HOM05D000056 ORTHO05D000019 3.6e-06 56.2 203 29.6
Cc08_g10480 Coffea canephora HOM05D000056 ORTHO05D000019 4.7e-06 55.8 233 27.5
Eucgr.J01686 Eucalyptus grandis HOM05D000056 ORTHO05D000019 4.7e-06 55.8 193 27.5
Lj7C445T0 Lonicera japonica HOM05D000991 ORTHO05D000848 4.7e-06 55.8 97 35.1
Manes.08G021900 Manihot esculenta HOM05D000056 ORTHO05D000019 4.7e-06 55.8 230 26.1
Atru.chr3.3361 Acer truncatum HOM05D000056 ORTHO05D000019 6.1e-06 55.5 229 26.2
Aqoxy5G03453 Aquilegia oxysepala HOM05D000056 ORTHO05D000019 6.1e-06 55.5 217 28.1
Dinv01133 Davidia involucrata HOM05D000003 ORTHO05D000007 6.1e-06 55.5 198 30.8
Lj7C440T8 Lonicera japonica HOM05D000991 ORTHO05D000848 6.1e-06 55.5 99 34.3
Potri.001G071300 Populus trichocarpa HOM05D000056 ORTHO05D000019 6.1e-06 55.5 197 29.4
Sc18g0000100 Simmondsia chinensis HOM05D000991 ORTHO05D000848 6.1e-06 55.5 156 30.8
Aqoxy4G02876 Aquilegia oxysepala HOM05D000056 ORTHO05D000019 8.0e-06 55.1 233 27.0
BcaB08g36420 Brassica carinata HOM05D000056 ORTHO05D000019 8.0e-06 55.1 203 28.6
Migut.K01212 Erythranthe guttata HOM05D000056 ORTHO05D000019 8.0e-06 55.1 219 26.9
Medtr5g086340 Medicago truncatula HOM05D000056 ORTHO05D000019 8.0e-06 55.1 207 29.5
Medtr8g042830 Medicago truncatula HOM05D000056 ORTHO05D000019 8.0e-06 55.1 220 24.1
Nn7g38005 Nelumbo nucifera HOM05D000056 ORTHO05D000019 8.0e-06 55.1 202 26.2
Potri.003G159400 Populus trichocarpa HOM05D000056 ORTHO05D000019 8.0e-06 55.1 201 30.8
SEGI_06561 Sequoiadendron giganteum HOM05D000991 ORTHO05D013089 8.0e-06 55.1 125 29.6


User provided reference genes

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