Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G0833 Papaver somniferum HOM05D006878 ORTHO05D008579 4.8e-135 484.6 257 100.0
PSO478G0882 Papaver somniferum HOM05D006878 ORTHO05D008579 5.7e-120 434.5 273 85.7
TAR371G0275 Trochodendron aralioides HOM05D006878 ORTHO05D008579 1.3e-84 317.0 269 62.5
GSVIVG01033083001 Vitis vinifera HOM05D006878 ORTHO05D008579 5.0e-84 315.1 261 64.4
Dinv33333 Davidia involucrata HOM05D006878 ORTHO05D008579 1.1e-83 313.9 261 65.5
Prupe.3G307100 Prunus persica HOM05D006878 ORTHO05D008579 2.5e-83 312.8 260 63.5
Aqoxy5G03335 Aquilegia oxysepala HOM05D006878 ORTHO05D008579 5.6e-83 311.6 271 63.1
MD09G1010100 Malus domestica HOM05D006878 ORTHO05D008579 7.3e-83 311.2 260 63.1
MD17G1000600 Malus domestica HOM05D006878 ORTHO05D008579 7.3e-83 311.2 260 62.3
TAR629G1805 Trochodendron aralioides HOM05D006878 ORTHO05D008579 2.1e-82 309.7 271 60.9
Actinidia05902 Actinidia chinensis HOM05D006878 ORTHO05D008579 2.8e-82 309.3 268 60.8
Rhsim08G0042400 Rhododendron simsii HOM05D006878 ORTHO05D008579 3.6e-82 308.9 274 60.9
CANSAT64G0355 Cannabis sativa HOM05D006878 ORTHO05D008579 8.1e-82 307.8 265 61.1
CSS0033487 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 1.1e-81 307.4 264 62.5
DCAR_015107 Daucus carota HOM05D006878 ORTHO05D008579 1.5e-80 303.5 272 60.3
CSS0001354 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 4.4e-80 302.0 253 64.0
TWI34G0743 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 4.4e-80 302.0 266 61.7
Atru.chr6.2581 Acer truncatum HOM05D006878 ORTHO05D008579 5.8e-80 301.6 260 64.6
Manes.15G161800 Manihot esculenta HOM05D006878 ORTHO05D008579 5.8e-80 301.6 269 59.9
Thecc.04G038000 Theobroma cacao HOM05D006878 ORTHO05D008579 5.8e-80 301.6 273 60.1
TWI34G1534 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 9.8e-80 300.8 272 60.3
Potri.001G329300 Populus trichocarpa HOM05D006878 ORTHO05D008579 2.2e-79 299.7 275 58.9
TAR629G1038 Trochodendron aralioides HOM05D006878 ORTHO05D008579 2.2e-79 299.7 258 61.6
Migut.K01467 Erythranthe guttata HOM05D006878 ORTHO05D008579 8.3e-79 297.7 274 60.2
Sed0002550 Sechium edule HOM05D006878 ORTHO05D008579 8.3e-79 297.7 261 62.1
Ciclev10016370m.g Citrus clementina HOM05D006878 ORTHO05D008579 1.1e-78 297.4 261 62.8
COL.COLO4_13265 Corchorus olitorius HOM05D006878 ORTHO05D008579 1.1e-78 297.4 265 60.4
vmacro18351 Vaccinium macrocarpon HOM05D006878 ORTHO05D008579 1.4e-78 297.0 285 58.6
Sabra16G0210700 Salix brachista HOM05D006878 ORTHO05D008579 1.9e-78 296.6 276 58.3
Cfa007222 Carpinus fangiana HOM05D006878 ORTHO05D008579 2.4e-78 296.2 262 61.1
Duzib147G1327 Durio zibethinus HOM05D006878 ORTHO05D008579 1.6e-77 293.5 273 57.9
Gorai.001G271700 Gossypium raimondii HOM05D006878 ORTHO05D008579 2.7e-77 292.7 258 60.9
Gohir.D07G235800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 4.6e-77 292.0 258 60.1
Gohir.A07G228800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 6.0e-77 291.6 258 60.5
C03p07460 Brassica napus HOM05D006878 ORTHO05D008579 7.8e-77 291.2 265 57.0
BolC3t13247H Brassica oleracea HOM05D006878 ORTHO05D008579 7.8e-77 291.2 265 57.0
PGR142G3785 Punica granatum HOM05D006878 ORTHO05D008579 7.8e-77 291.2 252 61.1
AL6G24810 Arabidopsis lyrata HOM05D006878 ORTHO05D008579 1.0e-76 290.8 256 59.0
Cc07_g00890 Coffea canephora HOM05D006878 ORTHO05D008579 1.0e-76 290.8 265 58.9
Nn3g16452 Nelumbo nucifera HOM05D006878 ORTHO05D008579 1.0e-76 290.8 257 61.5
Thhalv10014409m.g Eutrema salsugineum HOM05D006878 ORTHO05D008579 1.7e-76 290.0 256 59.4
A03p06460 Brassica napus HOM05D006878 ORTHO05D008579 2.3e-76 289.7 256 59.0
CsaV3_2G034120 Cucumis sativus L. HOM05D006878 ORTHO05D008579 3.9e-76 288.9 261 58.6
Oeu005107.2 Olea europaea HOM05D006878 ORTHO05D008579 3.9e-76 288.9 303 53.8
BcaB01g05305 Brassica carinata HOM05D006878 ORTHO05D008579 5.1e-76 288.5 256 58.6
ClCG11G007130 Citrullus lanatus HOM05D006878 ORTHO05D008579 6.6e-76 288.1 261 58.6
VMungo1383G2452 Vigna mungo HOM05D006878 ORTHO05D008579 1.1e-75 287.3 275 56.7
SGA_v2.0_scaffold47G17597 Striga asiatica HOM05D006878 ORTHO05D008579 1.9e-75 286.6 263 62.0
Carub.0006s1234 Capsella rubella HOM05D006878 ORTHO05D008579 3.3e-75 285.8 252 59.9
Nitab4.5_0002050g0060 Nicotiana tabacum HOM05D006878 ORTHO05D008579 3.3e-75 285.8 275 57.5
TPR.G38297 Trifolium pratense HOM05D006878 ORTHO05D008579 3.3e-75 285.8 251 61.0
AT5G14140 Arabidopsis thaliana HOM05D006878 ORTHO05D008579 4.3e-75 285.4 256 57.8
Aa31LG11G14940 Aethionema arabicum HOM05D006878 ORTHO05D008579 5.6e-75 285.0 268 56.0
Glyma.16G056000 Glycine max HOM05D006878 ORTHO05D008579 5.6e-75 285.0 274 57.3
MELO3C008189.2 Cucumis melo HOM05D006878 ORTHO05D008579 7.3e-75 284.6 261 57.9
Peaxi162Scf00420g00554 Petunia axillaris HOM05D006878 ORTHO05D008579 7.3e-75 284.6 267 57.7
MBI07_g39449_MAGBIO Magnolia biondii HOM05D006878 ORTHO05D008579 9.5e-75 284.3 254 59.4
Nitab4.5_0009844g0010 Nicotiana tabacum HOM05D006878 ORTHO05D008579 1.2e-74 283.9 274 56.6
Psat3g178400 Pisum sativum HOM05D006878 ORTHO05D008579 1.6e-74 283.5 250 60.8
RcHm_v2.0_Chr2g0175731 Rosa chinensis HOM05D006878 ORTHO05D008579 1.6e-74 283.5 269 56.9
Sp6g29870 Schrenkiella parvula HOM05D006878 ORTHO05D008579 1.6e-74 283.5 256 59.4
SpUn0049_0070 Schrenkiella parvula HOM05D006878 ORTHO05D008579 1.6e-74 283.5 256 59.4
CAN.G473.102 Capsicum annuum HOM05D006878 ORTHO05D008579 4.7e-74 282.0 274 56.9
FAN09G4559 Fragaria x ananassa HOM05D006878 ORTHO05D008579 4.7e-74 282.0 269 58.0
Phvul.001G093000 Phaseolus vulgaris HOM05D006878 ORTHO05D008579 4.7e-74 282.0 275 56.7
QL02p071231 Quercus lobata HOM05D006878 ORTHO05D008579 4.7e-74 282.0 298 53.4
BcaB01g06341 Brassica carinata HOM05D006878 ORTHO05D008579 6.2e-74 281.6 254 58.3
Solyc02g094170.3 Solanum lycopersicum HOM05D006878 ORTHO05D008579 6.2e-74 281.6 274 56.6
PGSC0003DMG400020210 Solanum tuberosum HOM05D006878 ORTHO05D008579 1.4e-73 280.4 274 56.2
ATR0561G206 Amborella trichopoda HOM05D006878 ORTHO05D008579 1.8e-73 280.0 262 56.5
HanXRQChr14g0450611 Helianthus annuus HOM05D006878 ORTHO05D008579 4.0e-73 278.9 252 61.5
Sopen02g038800 Solanum pennellii HOM05D006878 ORTHO05D008579 4.0e-73 278.9 274 56.2
Eucgr.I01641 Eucalyptus grandis HOM05D006878 ORTHO05D008579 1.2e-72 277.3 250 59.2
FvH4_6g53600 Fragaria vesca HOM05D006878 ORTHO05D008579 2.0e-72 276.6 268 56.3
FAN14G5463 Fragaria x ananassa HOM05D006878 ORTHO05D008579 2.6e-72 276.2 268 57.1
MSTRG.3257 Avicennia marina HOM05D006878 ORTHO05D008579 4.4e-72 275.4 264 59.1
Lalb_Chr14g0363461 Lupinus albus HOM05D006878 ORTHO05D008579 5.8e-72 275.0 262 58.4
Sc03g0006490 Simmondsia chinensis HOM05D006878 ORTHO05D008579 7.6e-72 274.6 253 59.3
arahy.Tifrunner.gnm1.ann1.1N9EHH Arachis hypogaea HOM05D006878 ORTHO05D008579 2.2e-71 273.1 258 57.4
arahy.Tifrunner.gnm1.ann1.G39TQA Arachis hypogaea HOM05D006878 ORTHO05D008579 2.2e-71 273.1 258 56.6
Lsat_1_v5_gn_2_93161 Lactuca sativa HOM05D006878 ORTHO05D008579 2.9e-71 272.7 250 59.6
SalBow7G1076 Salvia bowleyana HOM05D006878 ORTHO05D008579 6.4e-71 271.6 256 59.8
AUR62003439 Chenopodium quinoa HOM05D006878 ORTHO05D008579 1.9e-70 270.0 266 55.3
THA.LOC104821122 Tarenaya hassleriana HOM05D006878 ORTHO05D008579 1.9e-70 270.0 261 57.5
CDE05G3687 Ceratophyllum demersum HOM05D000160 ORTHO05D000496 4.6e-69 265.4 235 60.0
AUR62029405 Chenopodium quinoa HOM05D006878 ORTHO05D008579 6.0e-69 265.0 266 53.4
CiPaw.04G036900 Carya illinoinensis HOM05D006878 ORTHO05D008579 3.0e-68 262.7 239 60.3
CARHR199200 Cardamine hirsuta HOM05D006878 ORTHO05D008579 1.5e-67 260.4 262 55.0
ECA238G1054 Erigeron canadensis HOM05D006878 ORTHO05D008579 3.3e-67 259.2 271 53.5
Lj1g0011001 Lotus japonicus HOM05D006878 ORTHO05D008579 2.1e-66 256.5 253 56.9
Os11g0498400 Oryza sativa ssp. japonica HOM05D006878 ORTHO05D008579 2.1e-66 256.5 275 50.9
Zm00001eb112900 Zea mays HOM05D006878 ORTHO05D008579 2.8e-66 256.1 281 50.9
Ah.02g119990 Amaranthus hybridus HOM05D006878 ORTHO05D008579 1.8e-65 253.4 265 53.6
EL10Ac6g15414 Beta vulgaris HOM05D006878 ORTHO05D008579 9.3e-62 241.1 248 52.8
SHI03949 Sapria himalayana HOM05D006878 ORTHO05D008579 1.6e-61 240.4 264 50.8
Medtr7g029090 Medicago truncatula HOM05D006878 ORTHO05D008579 4.6e-61 238.8 208 61.5
Lju41C53T12 Lonicera japonica HOM05D006878 ORTHO05D008579 6.9e-57 224.9 264 50.4
Lalb_Chr22g0360351 Lupinus albus HOM05D006878 ORTHO05D008579 3.4e-56 222.6 202 59.4
Mapoly0041s0098 Marchantia polymorpha HOM05D006878 ORTHO05D008579 2.4e-49 199.9 268 43.3
Pp3c4_16130 Physcomitrium patens HOM05D006878 ORTHO05D008579 5.8e-48 195.3 264 44.3
SMO367G0946 Selaginella moellendorffii HOM05D006878 ORTHO05D008579 8.4e-47 191.4 240 45.8
Cpa.g.sc171.9 Carica papaya HOM05D006878 ORTHO05D008579 1.5e-43 180.6 131 68.7
Haze_14883 Corylus avellana HOM05D006878 ORTHO05D008579 6.0e-37 158.7 269 42.0
HPP92_022669 Vanilla planifolia HOM05D006878 ORTHO05D008579 7.9e-37 158.3 124 60.5
CBR_g26294 Chara braunii HOM05D006878 ORTHO05D008579 3.0e-36 156.4 166 47.6
Medtr7g029095 Medicago truncatula HOM05D006878 ORTHO05D008579 3.3e-35 152.9 272 37.1
Ca_22814_v3 Cicer arietinum L. HOM05D006878 ORTHO05D008579 2.6e-32 143.3 254 39.8
SEGI_11908 Sequoiadendron giganteum HOM05D006878 ORTHO05D008579 3.2e-30 136.3 115 56.5
BraA03t09977Z Brassica rapa HOM05D006878 ORTHO05D008579 5.3e-25 119.0 135 47.4
FAN02G3703 Fragaria x ananassa HOM05D006878 ORTHO05D008579 3.2e-22 109.8 147 45.6
PRCOL_00001512 Prasinoderma coloniale HOM05D006878 ORTHO05D008579 6.7e-20 102.1 139 37.4
CDE05G3052 Ceratophyllum demersum HOM05D006878 ORTHO05D008579 1.2e-16 91.3 138 44.2
Medtr7g029065 Medicago truncatula HOM05D004216 ORTHO05D004926 1.0e-12 78.2 129 45.0
Actinidia36205 Actinidia chinensis HOM05D006878 ORTHO05D008579 4.1e-09 66.2 39 71.8
FAN23G0356 Fragaria x ananassa HOM05D006878 ORTHO05D008579 2.6e-08 63.5 37 70.3
FAN23G0458 Fragaria x ananassa HOM05D006878 ORTHO05D008579 3.5e-08 63.2 38 81.6
Pp3c4_16200 Physcomitrium patens HOM05D006878 ORTHO05D008579 3.8e-07 59.7 134 38.1


User provided reference genes

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