Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G0801 Papaver somniferum HOM05D006675 ORTHO05D008302 3.6e-97 358.2 177 100.0
PSO170G4469 Papaver somniferum HOM05D006675 ORTHO05D008302 2.8e-94 348.6 180 97.2
Nn1g09734 Nelumbo nucifera HOM05D006675 ORTHO05D008302 1.2e-84 316.6 175 85.7
Aqoxy5G00552 Aquilegia oxysepala HOM05D006675 ORTHO05D008302 1.6e-84 316.2 180 86.7
Duzib205G0370 Durio zibethinus HOM05D006675 ORTHO05D008302 1.6e-84 316.2 180 85.0
CANSAT21G2314 Cannabis sativa HOM05D006675 ORTHO05D008302 3.5e-84 315.1 178 84.8
GSVIVG01013027001 Vitis vinifera HOM05D006675 ORTHO05D008302 7.7e-84 313.9 178 85.4
COL.COLO4_16920 Corchorus olitorius HOM05D006675 ORTHO05D008302 5.0e-83 311.2 180 83.9
QL12p001835 Quercus lobata HOM05D006675 ORTHO05D008302 6.6e-83 310.8 178 83.7
CiPaw.12G069400 Carya illinoinensis HOM05D006675 ORTHO05D008302 1.1e-82 310.1 178 83.1
RcHm_v2.0_Chr7g0212211 Rosa chinensis HOM05D006675 ORTHO05D008302 1.1e-82 310.1 178 83.7
MELO3C013816.2 Cucumis melo HOM05D006675 ORTHO05D008302 1.5e-82 309.7 180 82.2
Sed0011153 Sechium edule HOM05D006675 ORTHO05D008302 1.5e-82 309.7 180 82.8
CsaV3_3G001280 Cucumis sativus L. HOM05D006675 ORTHO05D008302 2.5e-82 308.9 180 81.7
Thecc.03G311400 Theobroma cacao HOM05D006675 ORTHO05D008302 3.3e-82 308.5 180 82.2
Ciclev10002637m.g Citrus clementina HOM05D006675 ORTHO05D008302 9.5e-82 307.0 180 82.8
Potri.001G135700 Populus trichocarpa HOM05D006675 ORTHO05D008302 9.5e-82 307.0 180 81.1
TWI60G1033 Tripterygium wilfordii HOM05D006675 ORTHO05D008302 9.5e-82 307.0 178 82.6
Atru.chr3.2397 Acer truncatum HOM05D006675 ORTHO05D008302 1.2e-81 306.6 178 83.1
Gohir.D03G176700 Gossypium hirsutum HOM05D006675 ORTHO05D008302 2.8e-81 305.4 180 81.7
BcaNung04023 Brassica carinata HOM05D006675 ORTHO05D008302 4.7e-81 304.7 180 80.0
Haze_12062 Corylus avellana HOM05D006675 ORTHO05D008302 4.7e-81 304.7 178 81.5
Duzib068G1343 Durio zibethinus HOM05D006675 ORTHO05D008302 6.1e-81 304.3 180 81.7
FvH4_5g23270 Fragaria vesca HOM05D006675 ORTHO05D008302 6.1e-81 304.3 178 82.0
FAN18G0120 Fragaria x ananassa HOM05D006675 ORTHO05D008302 6.1e-81 304.3 178 82.0
FAN18G2874 Fragaria x ananassa HOM05D006675 ORTHO05D008302 6.1e-81 304.3 178 82.0
VMungo1215G1847 Vigna mungo HOM05D006675 ORTHO05D008302 8.0e-81 303.9 178 80.9
Manes.01G194600 Manihot esculenta HOM05D006675 ORTHO05D008302 1.0e-80 303.5 180 81.7
CSS0012354 Camellia sinensis var. sinensis HOM05D006675 ORTHO05D008302 1.4e-80 303.1 180 81.7
CSS0042811 Camellia sinensis var. sinensis HOM05D006675 ORTHO05D008302 1.4e-80 303.1 180 81.7
Cfa009033 Carpinus fangiana HOM05D006675 ORTHO05D008302 1.4e-80 303.1 178 80.9
BcaC09g51446 Brassica carinata HOM05D000169 ORTHO05D008302 1.8e-80 302.8 180 78.9
BolC1t01279H Brassica oleracea HOM05D000169 ORTHO05D000542 1.8e-80 302.8 180 78.9
CAN.G773.29 Capsicum annuum HOM05D006675 ORTHO05D008302 2.3e-80 302.4 178 79.8
Lj2g0021996 Lotus japonicus HOM05D006675 ORTHO05D008302 2.3e-80 302.4 180 78.9
C01p13040 Brassica napus HOM05D000169 ORTHO05D000542 3.0e-80 302.0 180 78.9
BraA01t01049Z Brassica rapa HOM05D006675 ORTHO05D008302 3.0e-80 302.0 180 78.9
Thhalv10026368m.g Eutrema salsugineum HOM05D006675 ORTHO05D008302 4.0e-80 301.6 180 78.9
Gohir.A03G000027 Gossypium hirsutum HOM05D006675 ORTHO05D008302 4.0e-80 301.6 180 81.7
AT4G19003 Arabidopsis thaliana HOM05D006675 ORTHO05D008302 8.9e-80 300.4 180 78.3
Solyc08g076130.3 Solanum lycopersicum HOM05D006675 ORTHO05D008302 8.9e-80 300.4 180 78.3
Sopen08g024770 Solanum pennellii HOM05D006675 ORTHO05D008302 8.9e-80 300.4 180 78.3
PGSC0003DMG400003501 Solanum tuberosum HOM05D006675 ORTHO05D008302 8.9e-80 300.4 178 78.7
Phvul.002G134300 Phaseolus vulgaris HOM05D006675 ORTHO05D008302 1.2e-79 300.1 180 78.9
CARHR225840 Cardamine hirsuta HOM05D006675 ORTHO05D008302 1.5e-79 299.7 180 78.3
Sp7g17730 Schrenkiella parvula HOM05D006675 ORTHO05D008302 1.5e-79 299.7 180 78.3
THA.LOC104798450 Tarenaya hassleriana HOM05D006675 ORTHO05D008302 2.0e-79 299.3 180 77.8
PGR042G1238 Punica granatum HOM05D006675 ORTHO05D008302 2.6e-79 298.9 178 80.9
PGSC0003DMG400009297 Solanum tuberosum HOM05D006675 ORTHO05D008302 2.6e-79 298.9 178 78.7
Sc10g0009260 Simmondsia chinensis HOM05D006675 ORTHO05D008302 3.4e-79 298.5 180 77.8
THA.LOC104806177 Tarenaya hassleriana HOM05D006675 ORTHO05D008302 4.4e-79 298.1 180 78.3
Glyma.09G209600 Glycine max HOM05D006675 ORTHO05D008302 5.7e-79 297.7 178 78.1
AL7G35150 Arabidopsis lyrata HOM05D006675 ORTHO05D008302 7.5e-79 297.4 180 78.3
DCAR_024956 Daucus carota HOM05D006675 ORTHO05D008302 7.5e-79 297.4 179 78.2
Lalb_Chr16g0380971 Lupinus albus HOM05D006675 ORTHO05D008302 9.8e-79 297.0 178 78.1
Medtr5g028000 Medicago truncatula HOM05D006675 ORTHO05D008302 9.8e-79 297.0 180 77.8
ATR0796G253 Amborella trichopoda HOM05D006675 ORTHO05D008302 1.7e-78 296.2 180 78.3
Prupe.4G182100 Prunus persica HOM05D006675 ORTHO05D008302 2.2e-78 295.8 181 78.5
Cc08_g03740 Coffea canephora HOM05D006675 ORTHO05D008302 3.7e-78 295.0 178 78.1
Migut.E01322 Erythranthe guttata HOM05D006675 ORTHO05D008302 3.7e-78 295.0 178 78.1
HPP92_023365 Vanilla planifolia HOM05D006675 ORTHO05D008302 4.9e-78 294.7 180 79.4
Carub.0007s2216 Capsella rubella HOM05D006675 ORTHO05D008302 8.3e-78 293.9 180 76.1
MSTRG.1795 Avicennia marina HOM05D006675 ORTHO05D008302 2.4e-77 292.4 178 75.3
Glyma.01G011400 Glycine max HOM05D006675 ORTHO05D008302 4.1e-77 291.6 178 76.4
SalBow8G0964 Salvia bowleyana HOM05D006675 ORTHO05D008302 5.4e-77 291.2 178 75.3
Lj8A133G65 Lonicera japonica HOM05D006675 ORTHO05D008302 4.5e-76 288.1 199 71.4
MD11G1243800 Malus domestica HOM05D006675 ORTHO05D008302 7.8e-76 287.3 179 75.4
ECA233G1922 Erigeron canadensis HOM05D006675 ORTHO05D008302 1.3e-75 286.6 180 74.4
HanXRQChr12g0362191 Helianthus annuus HOM05D006675 ORTHO05D008302 6.6e-75 284.3 180 75.0
Aa31LG6G1700 Aethionema arabicum HOM05D006675 ORTHO05D008302 2.5e-74 282.3 179 75.4
BcaNung06620 Brassica carinata HOM05D006675 ORTHO05D008302 4.3e-74 281.6 203 68.0
HanXRQChr14g0430781 Helianthus annuus HOM05D006675 ORTHO05D008302 4.3e-74 281.6 187 71.7
Actinidia01330 Actinidia chinensis HOM05D006675 ORTHO05D008302 3.6e-73 278.5 165 78.8
Rhsim06G0208000 Rhododendron simsii HOM05D006675 ORTHO05D008302 3.6e-73 278.5 204 68.6
Zm00001eb157890 Zea mays HOM05D006675 ORTHO05D008302 1.0e-72 276.9 180 76.1
Oeu017091.1 Olea europaea HOM05D006675 ORTHO05D008302 8.3e-70 267.3 158 81.0
CDE02G0997 Ceratophyllum demersum HOM05D006675 ORTHO05D008302 3.2e-69 265.4 180 72.8
SEGI_13659 Sequoiadendron giganteum HOM05D006675 ORTHO05D008302 3.2e-69 265.4 175 71.4
Dinv06918 Davidia involucrata HOM05D006675 ORTHO05D008302 1.6e-68 263.1 159 80.5
Mapoly0004s0185 Marchantia polymorpha HOM05D006675 ORTHO05D008302 6.0e-68 261.2 177 67.8
Peaxi162Scf00052g00336 Petunia axillaris HOM05D006675 ORTHO05D008302 6.0e-68 261.2 157 78.3
AUR62007364 Chenopodium quinoa HOM05D006675 ORTHO05D008302 3.9e-67 258.5 160 76.9
Ca_25161_v3 Cicer arietinum L. HOM05D006675 ORTHO05D000003 3.9e-67 258.5 160 76.2
Eucgr.E01319 Eucalyptus grandis HOM05D006675 ORTHO05D008302 8.6e-67 257.3 176 71.0
SGA_v2.0_scaffold8G04421 Striga asiatica HOM05D006675 ORTHO05D008302 8.6e-67 257.3 159 75.5
Lsat_1_v5_gn_9_15400 Lactuca sativa HOM05D006675 ORTHO05D008302 1.2e-65 253.4 156 76.3
Nitab4.5_0002897g0050 Nicotiana tabacum HOM05D006675 ORTHO05D008302 1.2e-65 253.4 178 69.1
Eucgr.E01313 Eucalyptus grandis HOM05D006675 ORTHO05D008302 2.8e-65 252.3 177 68.9
ClCG06G010630 Citrullus lanatus HOM05D006675 ORTHO05D008302 3.6e-65 251.9 172 73.8
Thhalv10015765m.g Eutrema salsugineum HOM05D006675 ORTHO05D008302 3.6e-65 251.9 167 72.5
SMO364G0912 Selaginella moellendorffii HOM05D006675 ORTHO05D008302 2.3e-64 249.2 176 65.3
unitig_61.g26418 Utricularia gibba HOM05D006675 ORTHO05D008302 3.1e-64 248.8 160 73.1
Dinv29017 Davidia involucrata HOM05D006675 ORTHO05D008302 6.4e-62 241.1 153 75.8
EL10Ac5g11997 Beta vulgaris HOM05D006675 ORTHO05D008302 8.3e-62 240.7 161 70.8
Gorai.003G186000 Gossypium raimondii HOM05D006675 ORTHO05D008302 1.9e-61 239.6 139 80.6
Pp3c15_1420 Physcomitrium patens HOM05D006675 ORTHO05D008302 4.6e-60 235.0 175 61.7
TPR.G19460 Trifolium pratense HOM05D006675 ORTHO05D008302 1.0e-59 233.8 139 78.4
Sabra01G0105000 Salix brachista HOM05D006675 ORTHO05D008302 1.7e-59 233.0 218 57.8
CBR_g10842 Chara braunii HOM05D006675 ORTHO05D008302 4.4e-55 218.4 171 59.1
Nitab4.5_0002188g0010 Nicotiana tabacum HOM05D006675 ORTHO05D008302 4.1e-53 211.8 179 62.6
Psat6g005760 Pisum sativum HOM05D001533 ORTHO05D005122 2.5e-50 202.6 131 73.3
Cre02.g076400 Chlamydomonas reinhardtii HOM05D006675 ORTHO05D008302 3.1e-48 195.7 174 52.3
SGA_v2.0_scaffold8G04249 Striga asiatica HOM05D006675 ORTHO05D008302 4.9e-46 188.3 121 71.9
arahy.Tifrunner.gnm1.ann1.XR7VEH Arachis hypogaea HOM05D006675 ORTHO05D008302 8.7e-43 177.6 117 68.4
AagrBONN_evm.TU.Sc2ySwM_228.5837 Anthoceros agrestis HOM05D006675 ORTHO05D008302 1.3e-41 173.7 146 60.3
arahy.Tifrunner.gnm1.ann1.1JB7Z5 Arachis hypogaea HOM05D000001 ORTHO05D000003 5.3e-40 168.3 183 50.8
arahy.Tifrunner.gnm1.ann1.K4EES2 Arachis hypogaea HOM05D000001 ORTHO05D000003 5.3e-40 168.3 183 50.8
Os01g0658500 Oryza sativa ssp. japonica HOM05D006675 ORTHO05D008302 1.7e-35 153.3 93 76.3
vmacro00263 Vaccinium macrocarpon HOM05D006675 ORTHO05D008302 1.9e-34 149.8 96 71.9
MCO12G007 Micromonas commoda HOM05D006675 ORTHO05D008302 3.3e-34 149.1 174 41.4
PRCOL_00001914 Prasinoderma coloniale HOM05D006675 ORTHO05D008302 4.3e-34 148.7 174 43.7
Psat2g139880 Pisum sativum HOM05D006675 ORTHO05D008302 1.1e-32 144.1 91 72.5
Ah.12g055570 Amaranthus hybridus HOM05D000160 ORTHO05D008302 2.4e-32 142.9 126 62.7
Hma1.2p1_0803F.1_g220920 Hydrangea macrophylla HOM05D006675 ORTHO05D008302 3.8e-30 135.6 178 44.9
arahy.Tifrunner.gnm1.ann1.DBHH8D Arachis hypogaea HOM05D006675 ORTHO05D008302 1.9e-29 133.3 116 56.0
CARHR288450 Cardamine hirsuta HOM05D006675 ORTHO05D008302 3.7e-25 119.0 71 69.0
GSVIVG01009131001 Vitis vinifera HOM05D006675 ORTHO05D008302 1.5e-23 113.6 80 68.8
BcaB07g30589 Brassica carinata HOM05D006675 ORTHO05D008302 9.3e-21 104.4 99 55.6
Actinidia29284 Actinidia chinensis HOM05D006675 ORTHO05D008302 1.5e-18 97.1 64 68.8
BcaB06g29627 Brassica carinata HOM05D006675 ORTHO05D008302 7.4e-18 94.7 100 55.0
Hund14383 Selenicereus undatus HOM05D006675 ORTHO05D008302 1.6e-17 93.6 56 78.6
Haze_08131 Corylus avellana HOM05D006675 ORTHO05D008302 1.8e-16 90.1 50 86.0
A01p11020 Brassica napus HOM05D006675 ORTHO05D008302 4.1e-16 89.0 56 80.4
FAN13G1728 Fragaria x ananassa HOM05D006675 ORTHO05D008302 8.4e-14 81.3 46 78.3
Cfa024503 Carpinus fangiana HOM05D006675 ORTHO05D008302 2.9e-06 56.2 166 24.7
Gohir.D12G043050 Gossypium hirsutum HOM05D006675 ORTHO05D008302 5.0e-06 55.5 37 67.6


User provided reference genes

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