Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G0759 Papaver somniferum HOM05D003970 ORTHO05D004615 3.0e-131 471.9 239 100.0
PSO210G0608 Papaver somniferum HOM05D003970 ORTHO05D004615 1.1e-104 383.6 254 82.7
PSO210G0448 Papaver somniferum HOM05D003970 ORTHO05D004615 1.0e-102 377.1 254 81.1
TAR623G1298 Trochodendron aralioides HOM05D003970 ORTHO05D004615 9.4e-93 344.0 248 75.4
Aqoxy7G03992 Aquilegia oxysepala HOM05D003970 ORTHO05D004615 2.7e-92 342.4 248 75.0
TAR636G0030 Trochodendron aralioides HOM05D003970 ORTHO05D004615 8.0e-92 340.9 248 74.6
Nn6g35566 Nelumbo nucifera HOM05D003970 ORTHO05D004615 1.2e-90 337.0 254 71.7
DCAR_028283 Daucus carota HOM05D003970 ORTHO05D004615 3.7e-89 332.0 253 70.4
Glyma.17G051800 Glycine max HOM05D003970 ORTHO05D004615 4.5e-87 325.1 243 71.6
CiPaw.04G146900 Carya illinoinensis HOM05D003970 ORTHO05D004615 2.3e-86 322.8 244 71.7
DCAR_024721 Daucus carota HOM05D003970 ORTHO05D004615 2.3e-86 322.8 256 68.4
Prupe.7G204000 Prunus persica HOM05D003970 ORTHO05D004615 2.9e-86 322.4 244 71.7
MD15G1212900 Malus domestica HOM05D003970 ORTHO05D004615 3.8e-86 322.0 202 81.7
QL02p061312 Quercus lobata HOM05D003970 ORTHO05D004615 1.1e-85 320.5 205 81.0
QL02p061443 Quercus lobata HOM05D003970 ORTHO05D004615 1.1e-85 320.5 205 81.0
CANSAT56G0340 Cannabis sativa HOM05D003970 ORTHO05D004615 2.5e-85 319.3 248 71.0
Glyma.13G107500 Glycine max HOM05D003970 ORTHO05D004615 2.5e-85 319.3 238 72.3
Dinv36802 Davidia involucrata HOM05D003970 ORTHO05D004615 3.3e-85 318.9 244 70.5
Thecc.09G082200 Theobroma cacao HOM05D003970 ORTHO05D004615 3.3e-85 318.9 202 81.7
MD02G1085700 Malus domestica HOM05D003970 ORTHO05D004615 5.5e-85 318.2 244 71.7
Duzib168G1513 Durio zibethinus HOM05D003970 ORTHO05D004615 7.2e-85 317.8 249 70.3
Lj7A681T64 Lonicera japonica HOM05D003970 ORTHO05D004615 9.5e-85 317.4 244 69.7
VMungo1215G1067 Vigna mungo HOM05D003970 ORTHO05D004615 1.2e-84 317.0 241 70.5
Atru.chr7.1654 Acer truncatum HOM05D003970 ORTHO05D004615 2.1e-84 316.2 241 71.4
Lalb_Chr08g0232451 Lupinus albus HOM05D003970 ORTHO05D004615 2.1e-84 316.2 244 70.5
Phvul.003G133400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 3.6e-84 315.5 241 70.5
RcHm_v2.0_Chr2g0094171 Rosa chinensis HOM05D003970 ORTHO05D004615 3.6e-84 315.5 201 81.1
Aa31sc339G40 Aethionema arabicum HOM05D003970 ORTHO05D004615 4.7e-84 315.1 249 68.7
SGA_v2.0_scaffold21G09454 Striga asiatica HOM05D003970 ORTHO05D004615 4.7e-84 315.1 247 67.6
Lj4A288T21 Lonicera japonica HOM05D003970 ORTHO05D004615 6.1e-84 314.7 245 71.4
Manes.16G098400 Manihot esculenta HOM05D003970 ORTHO05D004615 6.1e-84 314.7 249 69.5
TWI32G0099 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 6.1e-84 314.7 247 68.4
Gorai.013G226600 Gossypium raimondii HOM05D003970 ORTHO05D004615 1.0e-83 313.9 232 72.8
Haze_25957 Corylus avellana HOM05D003970 ORTHO05D004615 1.8e-83 313.2 258 67.4
Eucgr.C03403 Eucalyptus grandis HOM05D003970 ORTHO05D004615 1.8e-83 313.2 253 68.0
Actinidia25226 Actinidia chinensis HOM05D003970 ORTHO05D004615 2.3e-83 312.8 248 67.7
FvH4_1g08120 Fragaria vesca HOM05D003970 ORTHO05D004615 4.0e-83 312.0 226 74.3
FAN19G1405 Fragaria x ananassa HOM05D003970 ORTHO05D004615 4.0e-83 312.0 226 74.3
Gohir.A13G192500 Gossypium hirsutum HOM05D003970 ORTHO05D004615 4.0e-83 312.0 232 72.4
Gohir.D13G197900 Gossypium hirsutum HOM05D003970 ORTHO05D004615 5.2e-83 311.6 232 72.4
arahy.Tifrunner.gnm1.ann1.B9Q4RC Arachis hypogaea HOM05D003970 ORTHO05D004615 6.8e-83 311.2 241 70.5
Lj4g0010970 Lotus japonicus HOM05D003970 ORTHO05D004615 6.8e-83 311.2 248 69.0
vmacro17169 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 8.9e-83 310.8 248 68.1
arahy.Tifrunner.gnm1.ann1.7IK41Y Arachis hypogaea HOM05D003970 ORTHO05D004615 1.2e-82 310.5 241 70.1
Cfa003038 Carpinus fangiana HOM05D003970 ORTHO05D004615 1.2e-82 310.5 248 69.0
Ciclev10010674m.g Citrus clementina HOM05D003970 ORTHO05D004615 1.2e-82 310.5 245 69.8
CsaV3_1G040740 Cucumis sativus L. HOM05D003970 ORTHO05D004615 1.2e-82 310.5 244 68.9
FAN23G0579 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.2e-82 310.5 205 79.0
FAN28G0363 Fragaria x ananassa HOM05D003970 ORTHO05D004615 1.2e-82 310.5 205 79.0
Oeu035943.1 Olea europaea HOM05D003970 ORTHO05D004615 1.5e-82 310.1 246 66.7
MELO3C015502.2 Cucumis melo HOM05D003970 ORTHO05D004615 2.0e-82 309.7 244 68.4
Sc18g0002350 Simmondsia chinensis HOM05D003970 ORTHO05D004615 2.6e-82 309.3 248 65.3
AUR62029007 Chenopodium quinoa HOM05D003970 ORTHO05D004615 3.4e-82 308.9 248 68.5
FAN26G0968 Fragaria x ananassa HOM05D003970 ORTHO05D004615 4.4e-82 308.5 205 78.5
FAN26G2539 Fragaria x ananassa HOM05D003970 ORTHO05D004615 4.4e-82 308.5 205 78.5
Gohir.D06G073400 Gossypium hirsutum HOM05D003970 ORTHO05D004615 4.4e-82 308.5 248 68.1
CDE05G2698 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 5.7e-82 308.1 245 68.2
Gorai.010G085700 Gossypium raimondii HOM05D003970 ORTHO05D004615 5.7e-82 308.1 248 68.1
TWI34G1861 Tripterygium wilfordii HOM05D003970 ORTHO05D004615 5.7e-82 308.1 246 67.9
EL10Ac8g19144 Beta vulgaris HOM05D003970 ORTHO05D004615 1.3e-81 307.0 253 65.2
SGA_v2.0_scaffold23G10060 Striga asiatica HOM05D003970 ORTHO05D004615 1.3e-81 307.0 241 67.6
Hma1.2p1_0672F.1_g200850 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 2.2e-81 306.2 257 65.0
Actinidia39693 Actinidia chinensis HOM05D003970 ORTHO05D004615 2.8e-81 305.8 255 65.5
CSS0040908 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 2.8e-81 305.8 252 66.3
BcaB06g26940 Brassica carinata HOM05D003970 ORTHO05D004615 4.9e-81 305.1 212 76.9
Gohir.A06G074600 Gossypium hirsutum HOM05D003970 ORTHO05D004615 4.9e-81 305.1 248 67.7
HanXRQChr10g0319561 Helianthus annuus HOM05D003970 ORTHO05D004615 4.9e-81 305.1 245 66.1
Lsat_1_v5_gn_5_142140 Lactuca sativa HOM05D003970 ORTHO05D004615 4.9e-81 305.1 254 65.0
MBI05_g23628_MAGBIO Magnolia biondii HOM05D003970 ORTHO05D004615 4.9e-81 305.1 246 68.3
MSTRG.26453 Avicennia marina HOM05D003970 ORTHO05D004615 6.3e-81 304.7 238 66.8
Ciclev10020772m.g Citrus clementina HOM05D003970 ORTHO05D004615 6.3e-81 304.7 243 67.5
THA.LOC104808900 Tarenaya hassleriana HOM05D003970 ORTHO05D004615 8.3e-81 304.3 229 71.2
PGR044G0734 Punica granatum HOM05D003970 ORTHO05D004615 1.1e-80 303.9 254 65.0
Ca_13142_v3 Cicer arietinum L. HOM05D003970 ORTHO05D004615 1.4e-80 303.5 244 65.6
ECA234G3560 Erigeron canadensis HOM05D003970 ORTHO05D004615 1.4e-80 303.5 254 64.2
Actinidia29916 Actinidia chinensis HOM05D003970 ORTHO05D004615 2.4e-80 302.8 236 68.6
Migut.J00961 Erythranthe guttata HOM05D003970 ORTHO05D004615 2.4e-80 302.8 238 66.4
Psat1g133240 Pisum sativum HOM05D003970 ORTHO05D004615 2.4e-80 302.8 244 67.2
Medtr2g040600 Medicago truncatula HOM05D003970 ORTHO05D004615 3.1e-80 302.4 244 67.2
Sabra06G0115100 Salix brachista HOM05D003970 ORTHO05D004615 4.1e-80 302.0 249 67.5
Os01g0585100 Oryza sativa ssp. japonica HOM05D003970 ORTHO05D004615 7.0e-80 301.2 238 67.2
Sed0004197 Sechium edule HOM05D003970 ORTHO05D004615 7.0e-80 301.2 257 64.6
Migut.L01537 Erythranthe guttata HOM05D003970 ORTHO05D004615 9.2e-80 300.8 232 67.7
Potri.006G145600 Populus trichocarpa HOM05D003970 ORTHO05D004615 9.2e-80 300.8 249 67.1
SalBow1G5979 Salvia bowleyana HOM05D003970 ORTHO05D004615 9.2e-80 300.8 251 63.7
AL7G44300 Arabidopsis lyrata HOM05D003970 ORTHO05D004615 1.2e-79 300.4 241 67.6
Thhalv10003454m.g Eutrema salsugineum HOM05D003970 ORTHO05D004615 2.0e-79 299.7 256 66.4
Potri.018G051100 Populus trichocarpa HOM05D003970 ORTHO05D004615 2.0e-79 299.7 260 65.8
Glyma.15G173000 Glycine max HOM05D003970 ORTHO05D004615 5.9e-79 298.1 244 63.5
Sp7g06850 Schrenkiella parvula HOM05D003970 ORTHO05D004615 5.9e-79 298.1 239 69.0
AUR62025170 Chenopodium quinoa HOM05D003970 ORTHO05D004615 7.8e-79 297.7 254 65.0
Lj6g0022796 Lotus japonicus HOM05D003970 ORTHO05D004615 1.0e-78 297.4 246 65.4
VMungo1309G1594 Vigna mungo HOM05D003970 ORTHO05D004615 1.0e-78 297.4 244 65.2
Carub.0007s3126 Capsella rubella HOM05D003970 ORTHO05D004615 1.7e-78 296.6 254 65.4
Glyma.09G067100 Glycine max HOM05D003970 ORTHO05D004615 1.7e-78 296.6 244 65.2
Hma1.2p1_0169F.1_g074770 Hydrangea macrophylla HOM05D003970 ORTHO05D004615 1.7e-78 296.6 190 78.4
TPR.G9462 Trifolium pratense HOM05D003970 ORTHO05D004615 1.7e-78 296.6 247 64.8
BcaC02g09478 Brassica carinata HOM05D003970 ORTHO05D004615 2.3e-78 296.2 251 66.5
C04p43240 Brassica napus HOM05D003970 ORTHO05D004615 2.3e-78 296.2 251 66.5
BolC4t25903H Brassica oleracea HOM05D003970 ORTHO05D004615 2.3e-78 296.2 254 65.0
CARHR217480 Cardamine hirsuta HOM05D003970 ORTHO05D004615 2.9e-78 295.8 257 65.4
A04p09740 Brassica napus HOM05D003970 ORTHO05D004615 3.8e-78 295.4 254 65.0
BraA04t16636Z Brassica rapa HOM05D003970 ORTHO05D004615 3.8e-78 295.4 254 65.0
ECA236G0065 Erigeron canadensis HOM05D003970 ORTHO05D004615 3.8e-78 295.4 238 67.6
Phvul.009G229400 Phaseolus vulgaris HOM05D003970 ORTHO05D004615 5.0e-78 295.0 241 66.0
AT5G35460 Arabidopsis thaliana HOM05D003970 ORTHO05D004615 6.6e-78 294.7 242 67.8
BcaB02g08054 Brassica carinata HOM05D003970 ORTHO05D004615 8.6e-78 294.3 242 68.2
Rhsim05G0013300 Rhododendron simsii HOM05D003970 ORTHO05D004615 8.6e-78 294.3 248 64.9
Zm00001eb160510 Zea mays HOM05D003970 ORTHO05D004615 8.6e-78 294.3 238 66.0
Sabra18G0047600 Salix brachista HOM05D003970 ORTHO05D004615 1.9e-77 293.1 278 62.2
Solyc07g041160.3 Solanum lycopersicum HOM05D003970 ORTHO05D004615 4.3e-77 292.0 245 64.9
Sopen07g020420 Solanum pennellii HOM05D003970 ORTHO05D004615 5.6e-77 291.6 245 64.5
Peaxi162Scf00724g00210 Petunia axillaris HOM05D003970 ORTHO05D004615 7.3e-77 291.2 254 62.2
Cpa.g.sc28.103 Carica papaya HOM05D003970 ORTHO05D004615 9.5e-77 290.8 223 70.4
Zm00001eb356980 Zea mays HOM05D003970 ORTHO05D004615 9.5e-77 290.8 238 65.5
PGSC0003DMG400020950 Solanum tuberosum HOM05D003970 ORTHO05D004615 1.2e-76 290.4 245 64.1
TPR.G18106 Trifolium pratense HOM05D003970 ORTHO05D004615 2.1e-76 289.7 239 65.3
ATR0051G045 Amborella trichopoda HOM05D003970 ORTHO05D004615 2.8e-76 289.3 245 64.9
Nitab4.5_0001488g0140 Nicotiana tabacum HOM05D003970 ORTHO05D004615 3.6e-76 288.9 245 63.3
vmacro06308 Vaccinium macrocarpon HOM05D003970 ORTHO05D004615 3.6e-76 288.9 234 65.0
CAN.G33.23 Capsicum annuum HOM05D003970 ORTHO05D004615 8.0e-76 287.7 237 64.1
Cc06_g11850 Coffea canephora HOM05D003970 ORTHO05D004615 1.4e-75 287.0 234 65.8
Medtr4g125680 Medicago truncatula HOM05D003970 ORTHO05D004615 4.0e-75 285.4 219 70.3
Nitab4.5_0006849g0020 Nicotiana tabacum HOM05D003970 ORTHO05D004615 4.0e-75 285.4 245 62.9
PGSC0003DMG400019544 Solanum tuberosum HOM05D003970 ORTHO05D004615 5.2e-75 285.0 190 75.3
HanXRQChr04g0126061 Helianthus annuus HOM05D003970 ORTHO05D004615 7.5e-74 281.2 239 64.4
ClCG03G015300 Citrullus lanatus HOM05D003970 ORTHO05D004615 1.3e-73 280.4 190 74.7
Hund08710 Selenicereus undatus HOM05D003970 ORTHO05D004615 1.8e-72 276.6 252 61.9
arahy.Tifrunner.gnm1.ann1.EC17FL Arachis hypogaea HOM05D003970 ORTHO05D004615 2.0e-71 273.1 237 62.4
Peaxi162Scf00219g00019 Petunia axillaris HOM05D003970 ORTHO05D004615 4.6e-71 271.9 259 57.5
Lsat_1_v5_gn_8_86281 Lactuca sativa HOM05D003970 ORTHO05D004615 7.3e-69 264.6 219 66.7
TAR624G1217 Trochodendron aralioides HOM05D003970 ORTHO05D004615 1.2e-68 263.8 248 60.5
Oeu000306.1 Olea europaea HOM05D003970 ORTHO05D004615 2.6e-66 256.1 246 58.9
unitig_26.g9177 Utricularia gibba HOM05D003970 ORTHO05D004615 3.2e-64 249.2 232 56.5
HPP92_005531 Vanilla planifolia HOM05D003970 ORTHO05D004615 3.2e-64 249.2 202 66.3
Mapoly0061s0008 Marchantia polymorpha HOM05D003970 ORTHO05D004615 5.4e-64 248.4 232 55.2
arahy.Tifrunner.gnm1.ann1.I25TD2 Arachis hypogaea HOM05D003970 ORTHO05D004615 3.0e-62 242.7 253 54.9
SMO169G0099 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 1.9e-61 240.0 236 55.1
Pp3c2_27340 Physcomitrium patens HOM05D003970 ORTHO05D004615 9.5e-61 237.7 240 53.3
Pp3c3_9180 Physcomitrium patens HOM05D003970 ORTHO05D004615 1.2e-60 237.3 232 54.3
Gohir.D13G197975 Gossypium hirsutum HOM05D003970 ORTHO05D004615 2.8e-60 236.1 201 66.7
BcaNung06959 Brassica carinata HOM05D003970 ORTHO05D004615 1.4e-59 233.8 208 64.9
Duzib150G0174 Durio zibethinus HOM05D003970 ORTHO05D004615 1.3e-57 227.3 251 55.4
SMO271G0136 Selaginella moellendorffii HOM05D003970 ORTHO05D004615 2.2e-57 226.5 236 53.8
AagrBONN_evm.TU.Sc2ySwM_340.231 Anthoceros agrestis HOM05D003970 ORTHO05D004615 4.9e-57 225.3 253 51.4
CSS0012417 Camellia sinensis var. sinensis HOM05D003970 ORTHO05D004615 1.1e-56 224.2 160 73.1
GSVIVG01015145001 Vitis vinifera HOM05D003970 ORTHO05D004615 1.3e-54 217.2 170 68.2
SEGI_24858 Sequoiadendron giganteum HOM05D003970 ORTHO05D004615 7.3e-53 211.5 171 60.8
CDE05G3050 Ceratophyllum demersum HOM05D003970 ORTHO05D004615 6.2e-52 208.4 172 65.1
Rhsim03G0230700 Rhododendron simsii HOM05D003970 ORTHO05D004615 8.4e-49 198.0 246 47.6
Ah.14g085030 Amaranthus hybridus HOM05D003970 ORTHO05D004615 1.2e-47 194.1 252 48.4
CBR_g16039 Chara braunii HOM05D003970 ORTHO05D004615 1.4e-40 170.6 232 44.0
RcHm_v2.0_Chr1g0313941 Rosa chinensis HOM05D003970 ORTHO05D004615 2.4e-40 169.9 107 80.4
Medtr2g039830 Medicago truncatula HOM05D003970 ORTHO05D004615 1.1e-37 161.0 164 53.7
Ah.09g231260 Amaranthus hybridus HOM05D003970 ORTHO05D004615 4.2e-32 142.5 252 40.5
Zm00001eb362060 Zea mays HOM05D003970 ORTHO05D004615 5.1e-30 135.6 95 72.6
AagrBONN_evm.TU.Sc2ySwM_340.377 Anthoceros agrestis HOM05D003970 ORTHO05D004615 1.3e-28 131.0 144 52.8
Medtr2g039840 Medicago truncatula HOM05D003970 ORTHO05D004615 2.9e-25 119.8 103 61.2
Zm00001eb242980 Zea mays HOM05D003970 ORTHO05D004615 2.9e-17 93.2 67 71.6
Zm00001eb304220 Zea mays HOM05D003970 ORTHO05D004615 2.9e-17 93.2 67 71.6
Zm00001eb122080 Zea mays HOM05D003970 ORTHO05D004615 6.5e-17 92.0 67 71.6
COL.COLO4_18145 Corchorus olitorius HOM05D003970 ORTHO05D004615 3.2e-16 89.7 68 70.6
Medtr1g008180 Medicago truncatula HOM05D003970 ORTHO05D004615 4.1e-11 72.8 52 69.2
Nitab4.5_0003493g0050 Nicotiana tabacum HOM05D003970 ORTHO05D004615 7.7e-10 68.6 49 65.3
Cre14.g620200 Chlamydomonas reinhardtii HOM05D003970 ORTHO05D004615 3.6e-07 59.7 122 34.4


User provided reference genes

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