Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G0745 Papaver somniferum HOM05D005335 ORTHO05D006472 4.5e-63 245.0 181 100.0
PSO478G2775 Papaver somniferum HOM05D005335 ORTHO05D006472 7.0e-56 221.1 181 93.9
TAR371G0199 Trochodendron aralioides HOM05D005335 ORTHO05D006472 2.2e-33 146.4 180 58.9
Duzib084G1383 Durio zibethinus HOM05D005335 ORTHO05D006472 2.7e-31 139.4 190 48.9
Nn3g16458 Nelumbo nucifera HOM05D005335 ORTHO05D006472 4.6e-31 138.7 188 49.5
PGR044G0086 Punica granatum HOM05D005335 ORTHO05D006472 4.6e-31 138.7 183 55.2
Duzib205G0334 Durio zibethinus HOM05D005335 ORTHO05D006472 7.8e-31 137.9 189 58.2
FAN13G0785 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.5e-29 133.7 185 54.6
QL10p002879 Quercus lobata HOM05D005335 ORTHO05D006472 1.2e-28 130.6 195 51.8
Rhsim08G0190300 Rhododendron simsii HOM05D005335 ORTHO05D006472 1.4e-27 127.1 192 51.0
Gohir.D09G247500 Gossypium hirsutum HOM05D005335 ORTHO05D006472 8.9e-27 124.4 188 46.8
Atru.chr6.1795 Acer truncatum HOM05D005335 ORTHO05D006472 1.2e-26 124.0 189 54.5
Gorai.009G431200 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.5e-26 123.6 181 44.8
Thecc.03G129400 Theobroma cacao HOM05D005335 ORTHO05D006472 1.5e-26 123.6 187 55.1
Gorai.006G272000 Gossypium raimondii HOM05D005335 ORTHO05D006472 2.0e-26 123.2 188 46.3
Actinidia36728 Actinidia chinensis HOM05D005335 ORTHO05D006472 3.4e-26 122.5 144 49.3
Gohir.A09G247000 Gossypium hirsutum HOM05D005335 ORTHO05D006472 3.4e-26 122.5 188 50.5
Gohir.D05G361600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 3.4e-26 122.5 181 44.2
CSS0021703 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 5.8e-26 121.7 175 44.0
TAR629G1091 Trochodendron aralioides HOM05D005335 ORTHO05D006472 5.8e-26 121.7 182 54.4
Rhsim12G0175000 Rhododendron simsii HOM05D005335 ORTHO05D006472 9.8e-26 120.9 181 50.8
Gohir.D08G258700 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.7e-25 120.2 188 45.7
vmacro19206 Vaccinium macrocarpon HOM05D005335 ORTHO05D006472 3.7e-25 119.0 190 49.5
ClCG06G017900 Citrullus lanatus HOM05D005335 ORTHO05D006472 4.9e-25 118.6 185 52.4
Hma1.2p1_0014F.1_g009400 Hydrangea macrophylla HOM05D005335 ORTHO05D006472 4.9e-25 118.6 190 51.6
BolC1t03128H Brassica oleracea HOM05D005335 ORTHO05D006472 4.1e-24 115.5 187 44.4
FAN04G0838 Fragaria x ananassa HOM05D005335 ORTHO05D006472 5.4e-24 115.2 185 51.4
A01p25690 Brassica napus HOM05D005335 ORTHO05D006472 1.2e-23 114.0 187 43.9
BraA01t02445Z Brassica rapa HOM05D005335 ORTHO05D006472 1.2e-23 114.0 187 43.9
CSS0038536 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 1.2e-23 114.0 194 43.3
Gorai.004G276200 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.2e-23 114.0 184 45.1
COL.COLO4_28131 Corchorus olitorius HOM05D005335 ORTHO05D006472 1.6e-23 113.6 192 52.1
Sed0021893 Sechium edule HOM05D005335 ORTHO05D006472 1.6e-23 113.6 180 48.9
MELO3C026206.2 Cucumis melo HOM05D005335 ORTHO05D006472 2.1e-23 113.2 185 51.4
BcaB05g23008 Brassica carinata HOM05D005335 ORTHO05D006472 2.7e-23 112.8 187 43.3
MSTRG.11283 Avicennia marina HOM05D005335 ORTHO05D006472 3.5e-23 112.5 184 51.1
Cc04_g09930 Coffea canephora HOM05D005335 ORTHO05D006472 3.5e-23 112.5 186 48.9
Cpa.g.sc13.114 Carica papaya HOM05D005335 ORTHO05D006472 6.0e-23 111.7 195 50.8
MD06G1141500 Malus domestica HOM05D005335 ORTHO05D006472 6.0e-23 111.7 184 53.3
Potri.012G097901 Populus trichocarpa HOM05D005335 ORTHO05D006472 6.0e-23 111.7 194 49.0
AT3G48550 Arabidopsis thaliana HOM05D005335 ORTHO05D006472 1.3e-22 110.5 191 40.8
Sabra15G0117300 Salix brachista HOM05D005335 ORTHO05D006472 1.3e-22 110.5 191 50.3
TWI39G0987 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 1.3e-22 110.5 187 52.9
AL5G28000 Arabidopsis lyrata HOM05D005335 ORTHO05D006472 2.3e-22 109.8 190 40.5
Dinv11173 Davidia involucrata HOM05D001420 ORTHO05D002488 2.3e-22 109.8 184 45.1
Haze_07140 Corylus avellana HOM05D005335 ORTHO05D006472 3.0e-22 109.4 184 52.7
CiPaw.11G007000 Carya illinoinensis HOM05D005335 ORTHO05D006472 3.9e-22 109.0 188 50.5
DCAR_016388 Daucus carota HOM05D005335 ORTHO05D006472 3.9e-22 109.0 187 48.7
FAN08G1274 Fragaria x ananassa HOM05D005335 ORTHO05D006472 3.9e-22 109.0 185 49.2
A06p19120 Brassica napus HOM05D005335 ORTHO05D006472 5.1e-22 108.6 180 42.8
BraA06t24996Z Brassica rapa HOM05D005335 ORTHO05D006472 5.1e-22 108.6 180 42.8
Gohir.D07G055600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 6.6e-22 108.2 189 51.3
Gorai.001G058900 Gossypium raimondii HOM05D005335 ORTHO05D006472 6.6e-22 108.2 189 51.3
Gohir.A07G051200 Gossypium hirsutum HOM05D005335 ORTHO05D006472 8.6e-22 107.8 189 51.3
Manes.06G119800 Manihot esculenta HOM05D005335 ORTHO05D006472 8.6e-22 107.8 190 52.1
FvH4_5g08350 Fragaria vesca HOM05D005335 ORTHO05D006472 1.9e-21 106.7 181 49.7
Cfa018794 Carpinus fangiana HOM05D005335 ORTHO05D006472 2.5e-21 106.3 187 50.8
Thhalv10010777m.g Eutrema salsugineum HOM05D005335 ORTHO05D006472 2.5e-21 106.3 181 42.0
Lalb_Chr13g0297231 Lupinus albus HOM05D005335 ORTHO05D006472 5.6e-21 105.1 180 48.3
CiPaw.12G043300 Carya illinoinensis HOM05D005335 ORTHO05D006472 9.5e-21 104.4 171 52.6
FAN18G1337 Fragaria x ananassa HOM05D005335 ORTHO05D006472 9.5e-21 104.4 181 49.2
Sp5g13430 Schrenkiella parvula HOM05D005335 ORTHO05D006472 9.5e-21 104.4 87 60.9
Carub.0005s1474 Capsella rubella HOM05D005335 ORTHO05D006472 1.2e-20 104.0 87 60.9
CsaV3_1G000550 Cucumis sativus L. HOM05D005335 ORTHO05D006472 1.2e-20 104.0 185 49.2
Lj4g0005056 Lotus japonicus HOM05D005335 ORTHO05D006472 1.2e-20 104.0 180 42.8
Gohir.A04G026600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.6e-20 103.6 144 46.5
RcHm_v2.0_Chr7g0190101 Rosa chinensis HOM05D005335 ORTHO05D006472 1.6e-20 103.6 185 48.1
Ciclev10032959m.g Citrus clementina HOM05D005335 ORTHO05D006472 2.1e-20 103.2 180 51.7
Nn4g22311 Nelumbo nucifera HOM05D005335 ORTHO05D006472 2.1e-20 103.2 184 51.1
Aa31LG4G17170 Aethionema arabicum HOM05D005335 ORTHO05D006472 2.8e-20 102.8 87 59.8
BcaC07g39341 Brassica carinata HOM05D005335 ORTHO05D006472 2.8e-20 102.8 178 41.6
C08p23580 Brassica napus HOM05D005335 ORTHO05D006472 2.8e-20 102.8 178 41.6
BolC8t49988H Brassica oleracea HOM05D005335 ORTHO05D006472 2.8e-20 102.8 178 41.6
BcaB01g00799 Brassica carinata HOM05D005335 ORTHO05D006472 6.2e-20 101.7 182 41.8
Potri.015G096500 Populus trichocarpa HOM05D005335 ORTHO05D006472 8.1e-20 101.3 192 47.9
HanXRQChr09g0273241 Helianthus annuus HOM05D005335 ORTHO05D006472 1.4e-19 100.5 182 48.4
PSO478G4723 Papaver somniferum HOM05D005335 ORTHO05D006472 1.4e-19 100.5 137 54.0
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 1.8e-19 100.1 171 51.5
MD14G1156700 Malus domestica HOM05D005335 ORTHO05D006472 1.8e-19 100.1 182 50.0
Lsat_1_v5_gn_4_80981 Lactuca sativa HOM05D005335 ORTHO05D006472 3.1e-19 99.4 185 48.1
Oeu023482.1 Olea europaea HOM05D005335 ORTHO05D006472 3.1e-19 99.4 181 47.5
Sabra12G0071600 Salix brachista HOM05D005335 ORTHO05D006472 3.1e-19 99.4 173 49.1
CAN.G1305.23 Capsicum annuum HOM05D005335 ORTHO05D006472 4.0e-19 99.0 175 49.1
Actinidia25571 Actinidia chinensis HOM05D005335 ORTHO05D006472 6.8e-19 98.2 137 48.9
Oeu005014.1 Olea europaea HOM05D005335 ORTHO05D006472 1.5e-18 97.1 181 45.9
Sed0012251 Sechium edule HOM05D005335 ORTHO05D006472 2.6e-18 96.3 177 50.3
PGSC0003DMG400018091 Solanum tuberosum HOM05D005335 ORTHO05D006472 2.6e-18 96.3 176 48.9
HanXRQChr16g0498141 Helianthus annuus HOM05D005335 ORTHO05D006472 4.4e-18 95.5 186 46.2
Oeu045458.1 Olea europaea HOM05D005335 ORTHO05D006472 4.4e-18 95.5 181 47.5
Oeu045459.1 Olea europaea HOM05D005335 ORTHO05D006472 4.4e-18 95.5 181 47.5
Sc04g0000630 Simmondsia chinensis HOM05D005335 ORTHO05D006472 4.4e-18 95.5 153 39.9
PSO017G4217 Papaver somniferum HOM05D005335 ORTHO05D006472 5.8e-18 95.1 137 52.6
Ca_26102_v3 Cicer arietinum L. HOM05D005335 ORTHO05D006472 7.5e-18 94.7 180 48.3
Nitab4.5_0002403g0010 Nicotiana tabacum HOM05D005335 ORTHO05D006472 7.5e-18 94.7 177 48.6
Prupe.5G150800 Prunus persica HOM05D005335 ORTHO05D006472 7.5e-18 94.7 167 51.5
HPP92_009722 Vanilla planifolia HOM05D005335 ORTHO05D006472 7.5e-18 94.7 181 36.5
VMungo1215G0398 Vigna mungo HOM05D005335 ORTHO05D006472 9.9e-18 94.4 180 48.9
DCAR_007490 Daucus carota HOM05D005335 ORTHO05D006472 1.3e-17 94.0 93 51.6
Sopen03g032000 Solanum pennellii HOM05D005335 ORTHO05D006472 1.7e-17 93.6 180 47.8
Lalb_Chr07g0183461 Lupinus albus HOM05D005335 ORTHO05D006472 2.2e-17 93.2 180 48.3
Nitab4.5_0000514g0170 Nicotiana tabacum HOM05D005335 ORTHO05D006472 2.9e-17 92.8 177 48.0
Ah.04g153430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 3.7e-17 92.4 144 44.4
Psat4g066680 Pisum sativum HOM05D005335 ORTHO05D006472 6.4e-17 91.7 182 47.3
Solyc03g112920.1 Solanum lycopersicum HOM05D005335 ORTHO05D006472 6.4e-17 91.7 180 47.2
Aqoxy5G03368 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 1.1e-16 90.9 184 44.6
EL10Ac5g11411 Beta vulgaris HOM05D005335 ORTHO05D006472 1.1e-16 90.9 146 44.5
GSVIVG01008545001 Vitis vinifera HOM05D005335 ORTHO05D006472 1.1e-16 90.9 93 73.1
TPR.G19227 Trifolium pratense HOM05D005335 ORTHO05D006472 1.4e-16 90.5 182 46.7
Migut.I00507 Erythranthe guttata HOM05D005335 ORTHO05D006472 2.4e-16 89.7 185 57.8
Actinidia08873 Actinidia chinensis HOM05D001420 ORTHO05D002488 3.2e-16 89.4 175 38.9
BcaC09g49876 Brassica carinata HOM05D005335 ORTHO05D006472 7.1e-16 88.2 187 48.7
Glyma.17G130400 Glycine max HOM05D005335 ORTHO05D006472 7.1e-16 88.2 184 46.2
Manes.14G051200 Manihot esculenta HOM05D005335 ORTHO05D006472 7.1e-16 88.2 181 47.5
Dinv23148 Davidia involucrata HOM05D005335 ORTHO05D006472 2.1e-15 86.7 129 48.1
TWI23G0456 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 2.7e-15 86.3 186 46.8
Ah.11g045430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 3.5e-15 85.9 148 42.6
Peaxi162Scf00009g00007 Petunia axillaris HOM05D005335 ORTHO05D006472 3.5e-15 85.9 167 48.5
Medtr4g103250 Medicago truncatula HOM05D005335 ORTHO05D006472 4.6e-15 85.5 180 46.1
Oeu030248.1 Olea europaea HOM05D005335 ORTHO05D006472 4.6e-15 85.5 174 43.1
Glyma.05G048500 Glycine max HOM05D005335 ORTHO05D006472 6.0e-15 85.1 183 47.0
THA.LOC104821517 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 6.0e-15 85.1 186 47.3
Aqoxy3G00598 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 1.0e-14 84.3 178 43.3
CARHR157350 Cardamine hirsuta HOM05D005335 ORTHO05D006472 5.1e-14 82.0 141 43.3
THA.LOC104818185 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 5.1e-14 82.0 183 44.8
AUR62029609 Chenopodium quinoa HOM05D005335 ORTHO05D006472 8.6e-14 81.3 84 56.0
AUR62034828 Chenopodium quinoa HOM05D005335 ORTHO05D006472 4.3e-13 79.0 85 52.9
SGA_v2.0_scaffold161G37793 Striga asiatica HOM05D005335 ORTHO05D006472 1.1e-11 74.3 86 50.0
C01p32260 Brassica napus HOM05D005335 ORTHO05D006472 3.4e-10 69.3 187 44.9
Migut.D01260 Erythranthe guttata HOM05D005335 ORTHO05D006472 3.4e-10 69.3 185 43.8
HanXRQChr05g0155191 Helianthus annuus HOM05D005335 ORTHO05D006472 3.4e-10 69.3 184 41.8
CANSAT80G0357 Cannabis sativa HOM05D005335 ORTHO05D006472 2.9e-09 66.2 250 36.8
THA.LOC104798946 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 8.4e-09 64.7 188 39.9
SGA_v2.0_scaffold5G02870 Striga asiatica HOM05D005335 ORTHO05D006472 2.4e-08 63.2 88 60.2
EL10Ac8g19493 Beta vulgaris HOM05D000179 ORTHO05D000107 3.5e-07 59.3 81 49.4
unitig_744.g24466 Utricularia gibba HOM05D005335 ORTHO05D006472 3.5e-07 59.3 174 40.2
Duzib068G0009 Durio zibethinus HOM05D000179 ORTHO05D000107 7.8e-07 58.2 92 48.9
CDE05G3493 Ceratophyllum demersum HOM05D000179 ORTHO05D000107 5.1e-06 55.5 91 50.5
Lj9P479T20 Lonicera japonica HOM05D005335 ORTHO05D006472 6.6e-06 55.1 69 69.6
QL03p039252 Quercus lobata HOM05D000179 ORTHO05D000107 8.7e-06 54.7 81 50.6
SEGI_18714 Sequoiadendron giganteum HOM05D005335 ORTHO05D006472 8.7e-06 54.7 84 59.5


User provided reference genes

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