Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G0728 Papaver somniferum HOM05D007161 ORTHO05D009103 2.4e-61 239.2 176 100.0
PSO478G3435 Papaver somniferum HOM05D007161 ORTHO05D009103 4.0e-56 221.9 176 95.5
CSS0029825 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 1.3e-27 127.1 124 86.3
Peaxi162Scf00201g00331 Petunia axillaris HOM05D007161 ORTHO05D009103 1.3e-27 127.1 169 70.4
CSS0009196 Camellia sinensis var. sinensis HOM05D007161 ORTHO05D009103 5.1e-27 125.2 124 85.5
Nitab4.5_0001485g0090 Nicotiana tabacum HOM05D007161 ORTHO05D009103 6.6e-27 124.8 170 70.0
Rhsim08G0144900 Rhododendron simsii HOM05D007161 ORTHO05D009103 3.3e-26 122.5 172 69.2
Atru.chr9.557 Acer truncatum HOM05D007161 ORTHO05D009103 5.6e-26 121.7 173 69.4
Dinv22772 Davidia involucrata HOM05D007161 ORTHO05D009103 5.6e-26 121.7 169 66.9
TWI60G0438 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 7.3e-26 121.3 167 70.1
Sopen03g034090 Solanum pennellii HOM05D007161 ORTHO05D009103 1.2e-25 120.6 169 67.5
TWI81G0640 Tripterygium wilfordii HOM05D007161 ORTHO05D009103 1.2e-25 120.6 167 70.7
THA.LOC104801155 Tarenaya hassleriana HOM05D007161 ORTHO05D009103 1.6e-25 120.2 171 66.7
vmacro17616 Vaccinium macrocarpon HOM05D007161 ORTHO05D009103 3.6e-25 119.0 191 61.3
Manes.06G083700 Manihot esculenta HOM05D007161 ORTHO05D009103 4.7e-25 118.6 164 70.7
Cc00_g12110 Coffea canephora HOM05D007161 ORTHO05D009103 6.2e-25 118.2 155 71.6
PGR083G0667 Punica granatum HOM05D007161 ORTHO05D009103 8.1e-25 117.9 175 67.4
CAN.G1228.16 Capsicum annuum HOM05D007161 ORTHO05D009103 1.1e-24 117.5 171 66.1
PGSC0003DMG400024633 Solanum tuberosum HOM05D007161 ORTHO05D009103 1.4e-24 117.1 169 66.9
Lsat_1_v5_gn_5_22381 Lactuca sativa HOM05D007161 ORTHO05D009103 3.1e-24 115.9 161 68.9
Prupe.5G206100 Prunus persica HOM05D007161 ORTHO05D009103 3.1e-24 115.9 167 70.7
Ciclev10022373m.g Citrus clementina HOM05D007161 ORTHO05D009103 4.0e-24 115.5 171 64.9
Sabra15G0084100 Salix brachista HOM05D007161 ORTHO05D009103 5.2e-24 115.2 173 66.5
Haze_07737 Corylus avellana HOM05D007161 ORTHO05D009103 9.0e-24 114.4 178 66.3
DCAR_011565 Daucus carota HOM05D007161 ORTHO05D009103 9.0e-24 114.4 163 68.7
CiPaw.11G054500 Carya illinoinensis HOM05D007161 ORTHO05D009103 1.2e-23 114.0 167 67.7
Solyc03g115020.3 Solanum lycopersicum HOM05D007161 ORTHO05D009103 1.2e-23 114.0 164 66.5
TAR629G0203 Trochodendron aralioides HOM05D007161 ORTHO05D009103 1.5e-23 113.6 176 63.1
QL10p019814 Quercus lobata HOM05D007161 ORTHO05D009103 2.0e-23 113.2 169 68.0
HanXRQChr08g0230491 Helianthus annuus HOM05D007161 ORTHO05D009103 2.6e-23 112.8 164 68.9
Nitab4.5_0007356g0010 Nicotiana tabacum HOM05D007161 ORTHO05D009103 2.6e-23 112.8 120 84.2
Cfa019345 Carpinus fangiana HOM05D007161 ORTHO05D009103 3.4e-23 112.5 178 66.3
MSTRG.4482 Avicennia marina HOM05D007161 ORTHO05D009103 5.8e-23 111.7 178 62.9
MSTRG.9598 Avicennia marina HOM05D007161 ORTHO05D009103 5.8e-23 111.7 173 65.3
Sed0004238 Sechium edule HOM05D007161 ORTHO05D009103 5.8e-23 111.7 177 66.1
ATR0177G008 Amborella trichopoda HOM05D007161 ORTHO05D009103 1.3e-22 110.5 167 67.1
GSVIVG01008106001 Vitis vinifera HOM05D007161 ORTHO05D009103 2.2e-22 109.8 158 66.5
FvH4_5g13740 Fragaria vesca HOM05D007161 ORTHO05D009103 3.8e-22 109.0 167 65.9
Eucgr.B00604 Eucalyptus grandis HOM05D007161 ORTHO05D009103 4.9e-22 108.6 168 66.1
CsaV3_1G006050 Cucumis sativus L. HOM05D007161 ORTHO05D009103 6.4e-22 108.2 171 66.7
ECA246G0920 Erigeron canadensis HOM05D007161 ORTHO05D009103 6.4e-22 108.2 165 66.7
Oeu017188.1 Olea europaea HOM05D007161 ORTHO05D009103 6.4e-22 108.2 125 73.6
A03p03560 Brassica napus HOM05D007161 ORTHO05D009103 8.4e-22 107.8 163 66.3
BraA03t09706Z Brassica rapa HOM05D007161 ORTHO05D009103 8.4e-22 107.8 163 66.3
FAN18G1870 Fragaria x ananassa HOM05D007161 ORTHO05D009103 8.4e-22 107.8 155 69.0
Potri.015G058600 Populus trichocarpa HOM05D007161 ORTHO05D009103 1.1e-21 107.5 164 68.3
Aqoxy3G03679 Aquilegia oxysepala HOM05D007161 ORTHO05D009103 1.4e-21 107.1 163 67.5
C03p04010 Brassica napus HOM05D007161 ORTHO05D009103 1.4e-21 107.1 163 66.3
BolC3t12938H Brassica oleracea HOM05D007161 ORTHO05D009103 1.4e-21 107.1 163 66.3
CANSAT56G0131 Cannabis sativa HOM05D007161 ORTHO05D009103 1.4e-21 107.1 172 65.7
ClCG04G011740 Citrullus lanatus HOM05D007161 ORTHO05D009103 1.4e-21 107.1 176 65.3
RcHm_v2.0_Chr7g0183201 Rosa chinensis HOM05D007161 ORTHO05D009103 1.4e-21 107.1 145 71.0
Carub.0006s0694 Capsella rubella HOM05D007161 ORTHO05D009103 1.9e-21 106.7 163 64.4
MELO3C002036.2 Cucumis melo HOM05D007161 ORTHO05D009103 1.9e-21 106.7 192 61.5
SalBow7G4182 Salvia bowleyana HOM05D007161 ORTHO05D009103 1.9e-21 106.7 162 67.9
BcaB01g05640 Brassica carinata HOM05D007161 ORTHO05D009103 2.4e-21 106.3 163 66.3
MD06G1225900 Malus domestica HOM05D007161 ORTHO05D009103 2.4e-21 106.3 167 68.3
AL6G18400 Arabidopsis lyrata HOM05D007161 ORTHO05D009103 3.2e-21 105.9 88 81.8
Nn4g23440 Nelumbo nucifera HOM05D007161 ORTHO05D009103 3.2e-21 105.9 162 69.1
SGA_v2.0_scaffold42G16039 Striga asiatica HOM05D007161 ORTHO05D009103 3.2e-21 105.9 158 67.7
Hund02576 Selenicereus undatus HOM05D007161 ORTHO05D009103 7.1e-21 104.8 165 65.5
Sc11g0004490 Simmondsia chinensis HOM05D007161 ORTHO05D009103 7.1e-21 104.8 180 61.7
BcaB01g05681 Brassica carinata HOM05D007161 ORTHO05D009103 9.3e-21 104.4 163 65.6
FAN13G1189 Fragaria x ananassa HOM05D007161 ORTHO05D009103 9.3e-21 104.4 167 65.9
MD14G1212800 Malus domestica HOM05D007161 ORTHO05D009103 9.3e-21 104.4 165 67.3
FAN08G2338 Fragaria x ananassa HOM05D007161 ORTHO05D009103 1.2e-20 104.0 152 69.1
Gohir.A07G068000 Gossypium hirsutum HOM05D007161 ORTHO05D009103 1.6e-20 103.6 172 66.3
CDE05G0262 Ceratophyllum demersum HOM05D007161 ORTHO05D009103 2.1e-20 103.2 163 65.6
Lj1g0027416 Lotus japonicus HOM05D007161 ORTHO05D009103 2.1e-20 103.2 157 69.4
Lj5C102G4 Lonicera japonica HOM05D007161 ORTHO05D009103 2.7e-20 102.8 150 70.0
Gohir.D07G072600 Gossypium hirsutum HOM05D007161 ORTHO05D009103 3.5e-20 102.4 172 66.3
AT5G08050 Arabidopsis thaliana HOM05D007161 ORTHO05D009103 4.6e-20 102.1 88 80.7
Glyma.04G161600 Glycine max HOM05D007161 ORTHO05D009103 6.0e-20 101.7 167 64.7
Aa31LG3G18490 Aethionema arabicum HOM05D007161 ORTHO05D009103 7.8e-20 101.3 163 62.6
Sp6g34900 Schrenkiella parvula HOM05D007161 ORTHO05D009103 7.8e-20 101.3 163 63.2
CARHR205130 Cardamine hirsuta HOM05D007161 ORTHO05D009103 1.7e-19 100.1 163 62.6
Thhalv10014904m.g Eutrema salsugineum HOM05D007161 ORTHO05D009103 1.7e-19 100.1 163 63.2
Psat5g207080 Pisum sativum HOM05D007161 ORTHO05D009103 1.7e-19 100.1 165 66.7
arahy.Tifrunner.gnm1.ann1.N0KAAL Arachis hypogaea HOM05D007161 ORTHO05D009103 2.3e-19 99.8 168 63.7
Gorai.001G076800 Gossypium raimondii HOM05D007161 ORTHO05D009103 2.3e-19 99.8 172 65.7
Ca_14363_v3 Cicer arietinum L. HOM05D007161 ORTHO05D009103 3.9e-19 99.0 162 66.7
Duzib084G1357 Durio zibethinus HOM05D007161 ORTHO05D009103 3.9e-19 99.0 120 78.3
Glyma.06G204200 Glycine max HOM05D007161 ORTHO05D009103 5.1e-19 98.6 167 64.7
TPR.G12153 Trifolium pratense HOM05D007161 ORTHO05D009103 5.1e-19 98.6 172 64.0
arahy.Tifrunner.gnm1.ann1.KM320G Arachis hypogaea HOM05D007161 ORTHO05D009103 8.7e-19 97.8 168 62.5
Oeu044879.1 Olea europaea HOM05D007161 ORTHO05D009103 8.7e-19 97.8 88 78.4
Phvul.009G202100 Phaseolus vulgaris HOM05D007161 ORTHO05D009103 8.7e-19 97.8 167 64.1
HanXRQChr17g0550221 Helianthus annuus HOM05D007161 ORTHO05D009103 1.1e-18 97.4 67 74.6
Ah.02g114100 Amaranthus hybridus HOM05D007161 ORTHO05D009103 1.5e-18 97.1 161 62.7
AUR62021546 Chenopodium quinoa HOM05D007161 ORTHO05D009103 1.5e-18 97.1 116 79.3
COL.COLO4_24339 Corchorus olitorius HOM05D007161 ORTHO05D009103 5.6e-18 95.1 165 63.6
EL10Ac5g11145 Beta vulgaris HOM05D007161 ORTHO05D009103 7.3e-18 94.7 173 60.7
AUR62008547 Chenopodium quinoa HOM05D007161 ORTHO05D009103 9.6e-18 94.4 160 65.0
Thecc.03G103000 Theobroma cacao HOM05D007161 ORTHO05D009103 9.6e-18 94.4 177 60.5
Lalb_Chr12g0199331 Lupinus albus HOM05D007161 ORTHO05D009103 1.6e-17 93.6 127 76.4
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 2.1e-17 93.2 153 65.4
Migut.D01637 Erythranthe guttata HOM05D007161 ORTHO05D009103 3.6e-17 92.4 165 64.2
SEGI_08112 Sequoiadendron giganteum HOM05D007161 ORTHO05D009103 2.4e-16 89.7 181 57.5
Medtr3g026020 Medicago truncatula HOM05D007161 ORTHO05D009103 6.9e-16 88.2 163 61.3
Os12g0575000 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 9.0e-16 87.8 131 67.2
Mapoly0107s0029 Marchantia polymorpha HOM05D007161 ORTHO05D009103 1.7e-14 83.6 148 65.5
AagrBONN_evm.TU.Sc2ySwM_344.2890 Anthoceros agrestis HOM05D007161 ORTHO05D009103 1.9e-13 80.1 118 72.9
Peaxi162Scf00009g00010 Petunia axillaris HOM05D007161 ORTHO05D009103 9.3e-13 77.8 77 53.2
SMO139G0085 Selaginella moellendorffii HOM05D007161 ORTHO05D009103 4.6e-12 75.5 116 68.1
Zm00001eb029520 Zea mays HOM05D007161 ORTHO05D009103 3.9e-11 72.4 168 55.4
Pp3c1_19210 Physcomitrium patens HOM05D007161 ORTHO05D009103 5.1e-11 72.0 65 58.5
Os11g0460900 Oryza sativa ssp. japonica HOM05D007161 ORTHO05D009103 4.3e-10 68.9 123 35.8
Actinidia04818 Actinidia chinensis HOM05D007161 ORTHO05D009103 1.3e-06 57.4 129 62.0


User provided reference genes

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