Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G0597 Papaver somniferum HOM05D006071 ORTHO05D007462 0.0e+00 1459.5 737 100.0
PSO478G4855 Papaver somniferum HOM05D006071 ORTHO05D007462 0.0e+00 1402.5 737 96.3
MBI07_g41894_MAGBIO Magnolia biondii HOM05D006071 ORTHO05D007462 7.7e-210 734.6 734 58.4
TAR629G1421 Trochodendron aralioides HOM05D006071 ORTHO05D007462 7.7e-210 734.6 759 56.9
Nn4g22141 Nelumbo nucifera HOM05D006071 ORTHO05D007462 2.5e-208 729.6 722 55.7
Dinv33279 Davidia involucrata HOM05D006071 ORTHO05D007462 2.7e-199 699.5 786 52.3
Aqoxy5G03151 Aquilegia oxysepala HOM05D006071 ORTHO05D007462 8.2e-196 688.0 731 52.5
Thecc.04G047500 Theobroma cacao HOM05D006071 ORTHO05D007462 1.8e-195 686.8 763 53.7
Manes.11G077000 Manihot esculenta HOM05D006071 ORTHO05D007462 3.6e-191 672.5 778 53.3
Gorai.011G088400 Gossypium raimondii HOM05D006071 ORTHO05D007462 3.0e-190 669.5 763 52.7
Gohir.D10G081100 Gossypium hirsutum HOM05D006071 ORTHO05D007462 5.2e-190 668.7 761 52.6
Prupe.3G313200 Prunus persica HOM05D006071 ORTHO05D007462 8.8e-190 667.9 730 54.0
QL02p069613 Quercus lobata HOM05D006071 ORTHO05D007462 1.5e-189 667.2 778 51.4
Lju41A60G26 Lonicera japonica HOM05D006071 ORTHO05D007462 2.6e-189 666.4 788 51.0
Hma1.2p1_0421F.1_g149970 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 7.4e-189 664.8 782 51.2
Ciclev10014332m.g Citrus clementina HOM05D006071 ORTHO05D007462 1.7e-188 663.7 831 49.9
Potri.014G145300 Populus trichocarpa HOM05D006071 ORTHO05D007462 1.7e-188 663.7 775 50.8
Duzib187G0315 Durio zibethinus HOM05D006071 ORTHO05D007462 1.4e-187 660.6 765 51.9
TWI32G0148 Tripterygium wilfordii HOM05D006071 ORTHO05D007462 2.4e-187 659.8 777 52.6
Haze_14947 Corylus avellana HOM05D006071 ORTHO05D007462 7.7e-186 654.8 826 49.8
MD17G1007100 Malus domestica HOM05D006071 ORTHO05D007462 2.2e-185 653.3 794 49.7
TPR.G10339 Trifolium pratense HOM05D006071 ORTHO05D007462 2.2e-185 653.3 778 51.8
FAN09G3006 Fragaria x ananassa HOM05D006071 ORTHO05D007462 2.5e-184 649.8 779 50.1
vmacro22244 Vaccinium macrocarpon HOM05D006071 ORTHO05D007462 2.1e-183 646.7 689 53.1
RcHm_v2.0_Chr2g0176461 Rosa chinensis HOM05D006071 ORTHO05D007462 2.7e-183 646.4 748 50.9
Lj1g0026027 Lotus japonicus HOM05D006071 ORTHO05D007462 3.6e-183 646.0 706 53.4
Rhsim10G0001400 Rhododendron simsii HOM05D006071 ORTHO05D007462 4.7e-183 645.6 758 51.3
Medtr7g084020 Medicago truncatula HOM05D006071 ORTHO05D007462 8.0e-183 644.8 763 50.7
Glyma.19G103000 Glycine max HOM05D006071 ORTHO05D007462 1.5e-181 640.6 709 53.3
ClCG05G012640 Citrullus lanatus HOM05D006071 ORTHO05D007462 2.0e-181 640.2 778 50.8
CANSAT64G2805 Cannabis sativa HOM05D006071 ORTHO05D007462 5.7e-181 638.6 785 49.9
Peaxi162Scf00420g00836 Petunia axillaris HOM05D006071 ORTHO05D007462 5.7e-181 638.6 699 52.4
EL10Ac6g13395 Beta vulgaris HOM05D006071 ORTHO05D007462 9.7e-181 637.9 775 49.7
Hund04198 Selenicereus undatus HOM05D006071 ORTHO05D007462 1.7e-180 637.1 775 50.5
Gohir.A10G070000 Gossypium hirsutum HOM05D006071 ORTHO05D007462 2.8e-180 636.3 771 50.5
Lalb_Chr24g0403151 Lupinus albus HOM05D006071 ORTHO05D007462 3.7e-180 636.0 777 50.8
FAN14G4217 Fragaria x ananassa HOM05D006071 ORTHO05D007462 2.4e-179 633.3 808 48.0
Lsat_1_v5_gn_0_22580 Lactuca sativa HOM05D006071 ORTHO05D007462 7.0e-179 631.7 765 51.5
ATR0582G122 Amborella trichopoda HOM05D006071 ORTHO05D007462 1.2e-178 630.9 790 50.1
Phvul.001G084800 Phaseolus vulgaris HOM05D006071 ORTHO05D007462 2.0e-178 630.2 703 53.2
PGR142G0457 Punica granatum HOM05D006071 ORTHO05D007462 7.7e-178 628.2 756 50.0
VMungo1383G1903 Vigna mungo HOM05D006071 ORTHO05D007462 1.3e-177 627.5 764 49.6
GSVIVG01032990001 Vitis vinifera HOM05D006071 ORTHO05D007462 5.0e-177 625.5 779 49.4
Ah.03g136370 Amaranthus hybridus HOM05D006071 ORTHO05D007462 8.5e-177 624.8 761 49.4
arahy.Tifrunner.gnm1.ann1.FMKW1Y Arachis hypogaea HOM05D006071 ORTHO05D007462 1.1e-176 624.4 762 49.2
Glyma.16G048700 Glycine max HOM05D006071 ORTHO05D007462 1.5e-176 624.0 674 53.4
arahy.Tifrunner.gnm1.ann1.FR25D6 Arachis hypogaea HOM05D006071 ORTHO05D007462 1.9e-176 623.6 762 49.2
MELO3C014817.2 Cucumis melo HOM05D006071 ORTHO05D007462 7.2e-176 621.7 781 49.6
AUR62037834 Chenopodium quinoa HOM05D006071 ORTHO05D007462 9.4e-176 621.3 644 54.5
Sc07g0003750 Simmondsia chinensis HOM05D006071 ORTHO05D007462 9.4e-176 621.3 761 49.3
CSS0001742 Camellia sinensis var. sinensis HOM05D006071 ORTHO05D007462 1.2e-175 620.9 625 54.2
Ca_08138_v3 Cicer arietinum L. HOM05D006071 ORTHO05D007462 8.0e-175 618.2 779 49.2
ECA246G2252 Erigeron canadensis HOM05D006071 ORTHO05D007462 1.8e-174 617.1 757 50.7
Nitab4.5_0002172g0120 Nicotiana tabacum HOM05D006071 ORTHO05D007462 2.3e-174 616.7 755 49.9
Sed0023591 Sechium edule HOM05D006071 ORTHO05D007462 2.3e-174 616.7 774 49.1
CsaV3_3G027770 Cucumis sativus L. HOM05D006071 ORTHO05D007462 4.0e-174 615.9 783 49.2
MD09G1003000 Malus domestica HOM05D006071 ORTHO05D007462 4.0e-174 615.9 724 51.1
CiPaw.03G002300 Carya illinoinensis HOM05D006071 ORTHO05D007462 6.8e-174 615.1 619 54.9
HanXRQChr17g0550941 Helianthus annuus HOM05D006071 ORTHO05D007462 1.2e-173 614.4 768 49.6
DCAR_014471 Daucus carota HOM05D006071 ORTHO05D007462 2.0e-173 613.6 704 51.7
Nitab4.5_0000519g0320 Nicotiana tabacum HOM05D006071 ORTHO05D007462 7.5e-173 611.7 757 49.9
Sopen02g039190 Solanum pennellii HOM05D006071 ORTHO05D007462 1.4e-171 607.4 659 51.9
Cc07_g01250 Coffea canephora HOM05D006071 ORTHO05D007462 1.8e-171 607.1 786 48.9
MSTRG.15572 Avicennia marina HOM05D006071 ORTHO05D007462 3.5e-170 602.8 774 48.2
FAN02G4165 Fragaria x ananassa HOM05D006071 ORTHO05D007462 9.5e-168 594.7 591 54.8
SGA_v2.0_scaffold47G17632 Striga asiatica HOM05D006071 ORTHO05D007462 3.0e-166 589.7 768 47.5
Migut.K01485 Erythranthe guttata HOM05D006071 ORTHO05D007462 2.0e-165 587.0 767 47.6
Os02g0516600 Oryza sativa ssp. japonica HOM05D006071 ORTHO05D007462 1.8e-163 580.5 673 50.4
Sabra14G0109500 Salix brachista HOM05D006071 ORTHO05D007462 1.9e-160 570.5 746 46.8
CDE05G0431 Ceratophyllum demersum HOM05D000877 ORTHO05D001509 5.6e-160 568.9 779 45.7
Thhalv10003691m.g Eutrema salsugineum HOM05D006071 ORTHO05D007462 4.4e-157 559.3 770 45.6
Eucgr.I01601 Eucalyptus grandis HOM05D006071 ORTHO05D007462 1.3e-156 557.8 754 46.3
AL5G15580 Arabidopsis lyrata HOM05D006071 ORTHO05D007462 3.7e-156 556.2 644 49.1
BcaB07g30217 Brassica carinata HOM05D006071 ORTHO05D007462 3.7e-156 556.2 697 48.1
Aa31LG2G5830 Aethionema arabicum HOM05D006071 ORTHO05D007462 6.4e-156 555.4 787 45.9
THA.LOC104805300 Tarenaya hassleriana HOM05D006071 ORTHO05D007462 1.9e-155 553.9 758 45.9
FvH4_6g54271 Fragaria vesca HOM05D006071 ORTHO05D007462 2.4e-155 553.5 663 49.8
Carub.0005s0473 Capsella rubella HOM05D006071 ORTHO05D007462 3.2e-155 553.1 801 45.1
Sp2g15850 Schrenkiella parvula HOM05D006071 ORTHO05D007462 7.8e-154 548.5 766 45.6
CARHR147750 Cardamine hirsuta HOM05D006071 ORTHO05D007462 4.3e-152 542.7 798 45.1
Actinidia36244 Actinidia chinensis HOM05D000877 ORTHO05D001509 7.3e-152 542.0 650 50.0
AT3G26730 Arabidopsis thaliana HOM05D006071 ORTHO05D007462 1.2e-151 541.2 798 44.2
BraA02t08478Z Brassica rapa HOM05D006071 ORTHO05D007462 1.4e-150 537.7 774 45.6
Zm00001eb242020 Zea mays HOM05D006071 ORTHO05D007462 1.4e-150 537.7 750 44.9
HPP92_024403 Vanilla planifolia HOM05D006071 ORTHO05D007462 2.6e-149 533.5 799 43.9
Oeu003415.3 Olea europaea HOM05D006071 ORTHO05D007462 2.2e-148 530.4 836 42.9
Hma1.2p1_0421F.1_g149975 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 1.9e-147 527.3 496 55.8
A02p34700 Brassica napus HOM05D006071 ORTHO05D007462 2.7e-146 523.5 773 44.9
C02p53260 Brassica napus HOM05D006071 ORTHO05D007462 1.0e-145 521.5 764 44.2
BcaC03g17381 Brassica carinata HOM05D006071 ORTHO05D007462 1.1e-144 518.1 760 44.1
BolC2t11398H Brassica oleracea HOM05D006071 ORTHO05D007462 3.1e-142 510.0 759 43.7
SEGI_23511 Sequoiadendron giganteum HOM05D006071 ORTHO05D007462 7.1e-139 498.8 734 43.1
Atru.chr6.2689 Acer truncatum HOM05D006071 ORTHO05D007462 9.9e-125 451.8 437 56.1
Hma1.2p1_0033F.1_g021090 Hydrangea macrophylla HOM05D006071 ORTHO05D007462 7.1e-123 445.7 501 50.7
Psat3g093480 Pisum sativum HOM05D006071 ORTHO05D007462 4.8e-119 433.0 512 50.6
Mapoly0006s0082 Marchantia polymorpha HOM05D006071 ORTHO05D007462 6.2e-119 432.6 695 40.3
unitig_0.g2406 Utricularia gibba HOM05D006071 ORTHO05D007462 1.8e-118 431.0 623 41.6
AUR62041072 Chenopodium quinoa HOM05D006071 ORTHO05D007462 1.3e-113 414.8 550 46.0
SMO141G0304 Selaginella moellendorffii HOM05D006071 ORTHO05D007462 2.6e-109 400.6 713 38.8
COL.COLO4_13369 Corchorus olitorius HOM05D006071 ORTHO05D007462 2.7e-106 390.6 714 40.1
Pp3c20_8910 Physcomitrium patens HOM05D006071 ORTHO05D007462 1.6e-103 381.3 793 35.3
Duzib147G1044 Durio zibethinus HOM05D006071 ORTHO05D007462 6.5e-92 342.8 615 39.7
SHI11389 Sapria himalayana HOM05D006071 ORTHO05D007462 2.9e-84 317.4 514 39.1
CBR_g4363 Chara braunii HOM05D006071 ORTHO05D007462 3.6e-82 310.5 797 31.2
Solyc02g094510.4 Solanum lycopersicum HOM05D006071 ORTHO05D007462 2.5e-75 287.7 392 45.4
CSS0035612 Camellia sinensis var. sinensis HOM05D006071 ORTHO05D007462 8.0e-74 282.7 512 37.3
AagrBONN_evm.TU.Sc2ySwM_344.4297 Anthoceros agrestis HOM05D006071 ORTHO05D007462 2.4e-62 244.6 733 30.4
Psat2g052360 Pisum sativum HOM05D006071 ORTHO05D007462 1.2e-50 205.7 435 35.2
AUR62041071 Chenopodium quinoa HOM05D006071 ORTHO05D007462 4.7e-50 203.8 226 56.2
CDE05G1324 Ceratophyllum demersum HOM05D006071 ORTHO05D007462 2.4e-46 191.4 259 43.6
Psat2g087400 Pisum sativum HOM05D006071 ORTHO05D007462 1.4e-41 175.6 334 38.9
MCO15G395 Micromonas commoda HOM05D006071 ORTHO05D007462 1.7e-36 158.7 775 24.3
HanXRQChr17g0550971 Helianthus annuus HOM05D006071 ORTHO05D007462 1.9e-35 155.2 217 44.7
HanXRQChr17g0550951 Helianthus annuus HOM05D006071 ORTHO05D007462 2.5e-35 154.8 243 44.9
Cre03.g144687 Chlamydomonas reinhardtii HOM05D006071 ORTHO05D007462 2.3e-33 148.3 628 24.2
Psat0s2046g0080 Pisum sativum HOM05D006071 ORTHO05D007462 8.6e-28 129.8 143 54.5
Atru.chr6.2690 Acer truncatum HOM05D006071 ORTHO05D007462 3.7e-23 114.4 207 44.9
Sc07g0003760 Simmondsia chinensis HOM05D006071 ORTHO05D007462 1.6e-21 109.0 117 48.7
Psat2g087520 Pisum sativum HOM05D006071 ORTHO05D007462 1.3e-20 105.9 143 49.0
Psat0s2046g0120 Pisum sativum HOM05D006071 ORTHO05D007462 2.5e-19 101.7 94 50.0
Cre16.g681251 Chlamydomonas reinhardtii HOM05D006071 ORTHO05D007462 1.5e-16 92.4 269 29.7
Lj1g0013684 Lotus japonicus HOM05D006071 ORTHO05D007462 2.6e-16 91.7 105 52.4
Atru.chr6.2688 Acer truncatum HOM05D006071 ORTHO05D007462 5.4e-14 84.0 99 52.5
Actinidia09845 Actinidia chinensis HOM05D006071 ORTHO05D007462 3.5e-13 81.3 108 45.4
Actinidia09844 Actinidia chinensis HOM05D006071 ORTHO05D007462 6.2e-10 70.5 74 52.7
CDE05G2071 Ceratophyllum demersum HOM05D006071 ORTHO05D007462 8.1e-10 70.1 115 41.7
unitig_0.g2405 Utricularia gibba HOM05D006071 ORTHO05D007462 4.0e-09 67.8 101 44.6
ClCG11G018130 Citrullus lanatus HOM05D000463 ORTHO05D001294 5.4e-06 57.4 59 40.7
Gohir.D04G143800 Gossypium hirsutum HOM05D000463 ORTHO05D001294 7.1e-06 57.0 59 42.4
Gorai.012G129300 Gossypium raimondii HOM05D000463 ORTHO05D001294 7.1e-06 57.0 59 42.4
Duzib213G0152 Durio zibethinus HOM05D000463 ORTHO05D001294 9.3e-06 56.6 104 29.8
Nitab4.5_0013630g0020 Nicotiana tabacum HOM05D000463 ORTHO05D001294 9.3e-06 56.6 59 39.0
PSO017G5908 Papaver somniferum HOM05D000515 ORTHO05D005511 9.3e-06 56.6 59 47.5
TPR.G6457 Trifolium pratense HOM05D000463 ORTHO05D001294 9.3e-06 56.6 93 34.4


User provided reference genes

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