Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 2.1e-49 198.7 100 100.0
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 1.5e-36 156.0 98 77.6
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 3.4e-36 154.8 97 76.3
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 5.8e-36 154.1 98 77.6
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 5.8e-36 154.1 98 76.5
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 2.2e-35 152.1 98 77.6
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 2.2e-35 152.1 98 76.5
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 3.8e-35 151.4 98 71.4
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 3.8e-35 151.4 98 75.5
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 4.9e-35 151.0 97 77.3
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 6.4e-35 150.6 97 76.3
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 6.4e-35 150.6 98 69.4
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 6.4e-35 150.6 98 69.4
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 6.4e-35 150.6 98 69.4
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 6.4e-35 150.6 98 74.5
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.1e-34 149.8 97 75.3
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 1.1e-34 149.8 99 77.8
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 1.1e-34 149.8 98 76.5
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 1.4e-34 149.4 98 73.5
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 1.9e-34 149.1 97 75.3
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 2.4e-34 148.7 95 75.8
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 2.4e-34 148.7 99 76.8
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 2.4e-34 148.7 97 75.3
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 2.4e-34 148.7 97 75.3
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 2.4e-34 148.7 97 75.3
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 4.2e-34 147.9 97 76.3
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 4.2e-34 147.9 97 76.3
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 5.4e-34 147.5 100 76.0
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 5.4e-34 147.5 98 72.4
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 5.4e-34 147.5 98 68.4
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 5.4e-34 147.5 100 75.0
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 9.2e-34 146.7 98 74.5
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 9.2e-34 146.7 98 72.4
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 9.2e-34 146.7 91 78.0
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 1.6e-33 146.0 98 72.4
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 1.6e-33 146.0 98 74.5
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 2.1e-33 145.6 100 75.0
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 2.1e-33 145.6 100 73.0
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 3.5e-33 144.8 95 73.7
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 3.5e-33 144.8 98 69.4
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 4.6e-33 144.4 98 71.4
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 4.6e-33 144.4 88 78.4
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 4.6e-33 144.4 97 73.2
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 4.6e-33 144.4 97 73.2
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 1.0e-32 143.3 95 72.6
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 2.3e-32 142.1 98 70.4
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 3.0e-32 141.7 94 73.4
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 3.9e-32 141.4 97 72.2
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 3.9e-32 141.4 99 70.7
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 5.1e-32 141.0 96 71.9
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 5.1e-32 141.0 94 73.4
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 6.6e-32 140.6 98 69.4
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 6.6e-32 140.6 96 70.8
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 8.7e-32 140.2 95 70.5
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 1.1e-31 139.8 91 73.6
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 1.5e-31 139.4 98 67.3
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 1.5e-31 139.4 97 72.2
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 3.3e-31 138.3 97 70.1
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 3.3e-31 138.3 100 68.0
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 7.3e-31 137.1 96 68.8
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 7.3e-31 137.1 98 68.4
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 7.3e-31 137.1 95 71.6
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 9.6e-31 136.7 96 66.7
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 9.6e-31 136.7 93 68.8
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 9.6e-31 136.7 97 69.1
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 9.6e-31 136.7 128 61.7
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 9.6e-31 136.7 91 70.3
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 2.1e-30 135.6 97 67.0
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 2.1e-30 135.6 95 68.4
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 2.8e-30 135.2 95 70.5
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 3.6e-30 134.8 92 70.7
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 3.6e-30 134.8 98 67.3
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 3.6e-30 134.8 101 65.3
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 6.2e-30 134.0 96 67.7
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 1.4e-29 132.9 98 68.4
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 1.4e-29 132.9 79 79.7
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 2.4e-29 132.1 94 63.8
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 6.9e-29 130.6 98 63.3
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 1.2e-28 129.8 90 72.2
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 1.5e-28 129.4 95 63.2
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 2.0e-28 129.0 90 70.0
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 2.6e-28 128.6 97 63.9
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 2.6e-28 128.6 101 64.4
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 2.6e-28 128.6 101 64.4
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 2.6e-28 128.6 101 64.4
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 2.6e-28 128.6 101 64.4
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 2.6e-28 128.6 96 66.7
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 2.6e-28 128.6 101 66.3
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 3.4e-28 128.3 96 67.7
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 5.8e-28 127.5 101 63.4
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 5.8e-28 127.5 100 69.0
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 5.8e-28 127.5 96 63.5
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 9.9e-28 126.7 80 78.8
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 5.4e-26 120.9 83 73.5
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 1.2e-25 119.8 102 62.7
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 1.2e-25 119.8 102 62.7
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 1.6e-25 119.4 102 62.7
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 2.1e-25 119.0 80 71.2
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 2.7e-25 118.6 102 62.7
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 2.7e-25 118.6 102 62.7
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 3.5e-25 118.2 77 74.0
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 4.6e-25 117.9 102 61.8
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 3.9e-24 114.8 83 66.3
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 1.8e-21 105.9 94 55.3
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 2.4e-21 105.5 78 66.7
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 2.4e-21 105.5 65 75.4
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 2.6e-20 102.1 84 56.0
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 1.4e-18 96.3 93 55.9
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 3.0e-16 88.6 71 59.2
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 8.7e-16 87.0 92 46.7
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 2.1e-14 82.4 89 48.3
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 2.6e-12 75.5 99 42.4
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 2.6e-12 75.5 113 43.4
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.0e-11 73.6 47 70.2
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 6.5e-11 70.9 58 62.1
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 1.3e-08 63.2 69 43.5
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.3e-08 63.2 38 68.4
AUR62035175 Chenopodium quinoa HOM05D006709 ORTHO05D008329 1.6e-06 56.2 41 65.9
CBR_g27877 Chara braunii HOM05D006709 ORTHO05D008329 8.2e-06 53.9 55 45.5


User provided reference genes

Program Settings