Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G0519 Papaver somniferum HOM05D008012 ORTHO05D010154 1.6e-178 629.4 331 100.0
TAR628G1418 Trochodendron aralioides HOM05D008012 ORTHO05D010154 2.0e-24 117.5 375 33.3
CiPaw.07G166200 Carya illinoinensis HOM05D008012 ORTHO05D010154 9.9e-24 115.2 296 33.4
MBI02_g32605_MAGBIO Magnolia biondii HOM05D008012 ORTHO05D010154 3.5e-21 106.7 323 29.7
Dinv44854 Davidia involucrata HOM05D008012 ORTHO05D010154 1.0e-20 105.1 328 30.2
CANSAT25G2577 Cannabis sativa HOM05D008012 ORTHO05D010154 2.3e-20 104.0 164 37.2
Lj1g0025426 Lotus japonicus HOM05D008012 ORTHO05D010154 8.6e-20 102.1 183 37.2
Aqoxy5G01307 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 1.5e-19 101.3 183 38.3
Cfa013683 Carpinus fangiana HOM05D008012 ORTHO05D010154 1.9e-19 100.9 356 29.8
CSS0008352 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 3.3e-19 100.1 311 30.5
Prupe.1G530900 Prunus persica HOM05D008012 ORTHO05D010154 1.6e-18 97.8 182 36.3
Rhsim06G0072100 Rhododendron simsii HOM05D008012 ORTHO05D010154 2.1e-18 97.4 117 41.0
Hma1.2p1_0125F.1_g058940 Hydrangea macrophylla HOM05D008012 ORTHO05D010154 1.1e-17 95.1 137 40.9
Cpa.g.sc21.9 Carica papaya HOM05D008012 ORTHO05D010154 1.4e-17 94.7 124 39.5
PGR031G3518 Punica granatum HOM05D052328 ORTHO05D010154 3.1e-17 93.6 352 28.7
FAN04G0544 Fragaria x ananassa HOM05D008012 ORTHO05D010154 4.0e-17 93.2 153 38.6
Eucgr.F02139 Eucalyptus grandis HOM05D008012 ORTHO05D010154 6.9e-17 92.4 204 34.8
AUR62019041 Chenopodium quinoa HOM05D008012 ORTHO05D010154 1.2e-16 91.7 149 37.6
Duzib093G0747 Durio zibethinus HOM05D008012 ORTHO05D010154 2.0e-16 90.9 348 28.7
vmacro21334 Vaccinium macrocarpon HOM05D008012 ORTHO05D010154 2.6e-16 90.5 100 47.0
EL10Ac1g01062 Beta vulgaris HOM05D008012 ORTHO05D010154 7.6e-16 89.0 185 36.2
RcHm_v2.0_Chr7g0236831 Rosa chinensis HOM05D008012 ORTHO05D010154 1.3e-15 88.2 181 33.1
GSVIVG01009167001 Vitis vinifera HOM05D008012 ORTHO05D010154 1.3e-15 88.2 156 36.5
Lalb_Chr23g0270051 Lupinus albus HOM05D008012 ORTHO05D010154 1.7e-15 87.8 109 40.4
FvH4_5g35450 Fragaria vesca HOM05D008012 ORTHO05D010154 4.9e-15 86.3 153 37.3
FAN08G2109 Fragaria x ananassa HOM05D008012 ORTHO05D010154 4.9e-15 86.3 153 37.3
CDE04G1170 Ceratophyllum demersum HOM05D008012 ORTHO05D010154 6.4e-15 85.9 166 33.7
FAN18G1410 Fragaria x ananassa HOM05D008012 ORTHO05D010154 8.4e-15 85.5 157 36.9
Aqoxy6G01439 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 1.1e-14 85.1 135 34.8
Lalb_Chr11g0065041 Lupinus albus HOM05D008012 ORTHO05D010154 1.9e-14 84.3 185 34.1
Thecc.08G070000 Theobroma cacao HOM05D008012 ORTHO05D010154 1.9e-14 84.3 169 29.6
Atru.chr13.1021 Acer truncatum HOM05D008012 ORTHO05D010154 2.4e-14 84.0 315 29.2
Hund16860 Selenicereus undatus HOM05D008012 ORTHO05D010154 2.4e-14 84.0 155 35.5
COL.COLO4_35233 Corchorus olitorius HOM05D008012 ORTHO05D010154 3.2e-14 83.6 196 32.1
Nn5g29899 Nelumbo nucifera HOM05D008012 ORTHO05D010154 7.1e-14 82.4 324 29.9
TWI56G1079 Tripterygium wilfordii HOM05D008012 ORTHO05D010154 9.3e-14 82.0 155 35.5
CAN.G1215.11 Capsicum annuum HOM05D008012 ORTHO05D010154 1.6e-13 81.3 96 41.7
Gohir.A05G219900 Gossypium hirsutum HOM05D008012 ORTHO05D010154 2.7e-13 80.5 165 30.9
Glyma.04G091500 Glycine max HOM05D008012 ORTHO05D010154 3.5e-13 80.1 180 33.9
Dinv42620 Davidia involucrata HOM05D008012 ORTHO05D010154 7.8e-13 79.0 302 28.1
Ciclev10002397m.g Citrus clementina HOM05D008012 ORTHO05D010154 1.7e-12 77.8 175 31.4
Manes.18G059880 Manihot esculenta HOM05D008012 ORTHO05D010154 1.7e-12 77.8 206 29.1
Phvul.009G144400 Phaseolus vulgaris HOM05D008012 ORTHO05D010154 1.7e-12 77.8 182 32.4
Glyma.06G093300 Glycine max HOM05D008012 ORTHO05D010154 2.3e-12 77.4 137 38.0
Sc23g0000670 Simmondsia chinensis HOM05D008012 ORTHO05D010154 2.3e-12 77.4 156 32.1
TPR.G26063 Trifolium pratense HOM05D008012 ORTHO05D010154 2.3e-12 77.4 97 36.1
QL09p017632 Quercus lobata HOM05D008012 ORTHO05D010154 3.0e-12 77.0 123 35.8
Zm00001eb038310 Zea mays HOM05D008012 ORTHO05D010154 3.9e-12 76.6 128 35.2
Ca_15998_v3 Cicer arietinum L. HOM05D008012 ORTHO05D010154 6.6e-12 75.9 119 30.3
Gohir.D05G222500 Gossypium hirsutum HOM05D008012 ORTHO05D010154 1.1e-11 75.1 326 25.8
Gorai.009G229900 Gossypium raimondii HOM05D008012 ORTHO05D010154 1.5e-11 74.7 326 25.8
ECA232G0711 Erigeron canadensis HOM05D008012 ORTHO05D010154 3.3e-11 73.6 145 33.8
Lsat_1_v5_gn_9_75360 Lactuca sativa HOM05D008012 ORTHO05D010154 5.6e-11 72.8 110 34.5
Actinidia10381 Actinidia chinensis HOM05D000160 ORTHO05D001344 2.8e-10 70.5 51 58.8
arahy.Tifrunner.gnm1.ann1.S7389H Arachis hypogaea HOM05D008012 ORTHO05D010154 6.2e-10 69.3 117 35.0
SEGI_09514 Sequoiadendron giganteum HOM05D008012 ORTHO05D010154 6.2e-10 69.3 90 36.7
VMungo1309G2208 Vigna mungo HOM05D008012 ORTHO05D010154 1.1e-09 68.6 99 34.3
HanXRQChr12g0378051 Helianthus annuus HOM05D008012 ORTHO05D010154 2.4e-09 67.4 168 29.2
CSS0015058 Camellia sinensis var. sinensis HOM05D008012 ORTHO05D010154 2.6e-08 63.9 50 58.0
HanXRQChr12g0378041 Helianthus annuus HOM05D008012 ORTHO05D010154 2.6e-08 63.9 137 34.3
Medtr3g100460 Medicago truncatula HOM05D008012 ORTHO05D010154 7.6e-08 62.4 83 36.1
Psat5g046360 Pisum sativum HOM05D008012 ORTHO05D010154 1.7e-07 61.2 161 28.6
Potri.005G156500 Populus trichocarpa HOM05D008012 ORTHO05D010154 8.4e-07 58.9 337 24.9
Sopen07g015000 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 58.5 42 61.9
Pp3c2_36970 Physcomitrium patens HOM05D008196 ORTHO05D010261 1.9e-06 57.8 121 28.1
Pp3c2_36980 Physcomitrium patens HOM05D008196 ORTHO05D010261 1.9e-06 57.8 121 28.1
ATR0665G245 Amborella trichopoda HOM05D008012 ORTHO05D010154 2.4e-06 57.4 145 31.0
Pp3c1_4500 Physcomitrium patens HOM05D008196 ORTHO05D010261 2.4e-06 57.4 98 28.6
Sabra05G0120100 Salix brachista HOM05D008012 ORTHO05D010154 2.4e-06 57.4 316 24.7
unitig_746.g26861 Utricularia gibba HOM05D003060 ORTHO05D001716 9.3e-06 55.5 96 28.1


User provided reference genes

Program Settings