Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G0391 Papaver somniferum HOM05D007607 ORTHO05D009603 1.2e-65 253.1 136 100.0
PSO675G5570 Papaver somniferum HOM05D007607 ORTHO05D009603 5.4e-61 237.7 136 94.9
Cfa015274 Carpinus fangiana HOM05D007607 ORTHO05D009603 1.7e-22 109.8 138 51.4
Actinidia28975 Actinidia chinensis HOM05D007607 ORTHO05D009603 3.2e-21 105.5 132 51.5
Haze_01353 Corylus avellana HOM05D007607 ORTHO05D009603 1.0e-19 100.5 137 48.2
TAR362G0213 Trochodendron aralioides HOM05D007607 ORTHO05D009603 6.7e-19 97.8 133 51.1
Sc13g0006620 Simmondsia chinensis HOM05D007607 ORTHO05D009603 1.7e-17 93.2 96 59.4
QL10p057428 Quercus lobata HOM05D007607 ORTHO05D009603 2.8e-17 92.4 135 48.1
Ciclev10022842m.g Citrus clementina HOM05D007607 ORTHO05D009603 3.7e-17 92.0 138 47.8
RhsimUnG0015300 Rhododendron simsii HOM05D007607 ORTHO05D009603 4.8e-17 91.7 137 46.0
Sed0020904 Sechium edule HOM05D007607 ORTHO05D009603 4.8e-17 91.7 131 48.9
CiPaw.01G169900 Carya illinoinensis HOM05D007607 ORTHO05D009603 6.3e-17 91.3 135 45.2
GSVIVG01038189001 Vitis vinifera HOM05D007607 ORTHO05D009603 8.2e-17 90.9 136 46.3
Dinv18311 Davidia involucrata HOM05D007607 ORTHO05D009603 2.4e-16 89.4 136 48.5
QL10p057723 Quercus lobata HOM05D007607 ORTHO05D009603 6.9e-16 87.8 135 45.9
Thecc.04G162800 Theobroma cacao HOM05D007607 ORTHO05D009603 2.0e-15 86.3 130 46.2
CANSAT56G1551 Cannabis sativa HOM05D007607 ORTHO05D009603 7.7e-15 84.3 140 42.1
Rhsim02G0085800 Rhododendron simsii HOM05D007607 ORTHO05D009603 7.7e-15 84.3 133 44.4
CiPaw.02G100000 Carya illinoinensis HOM05D007607 ORTHO05D009603 6.5e-14 81.3 132 42.4
CAN.G1237.5 Capsicum annuum HOM05D007607 ORTHO05D009603 1.4e-13 80.1 136 41.2
Peaxi162Scf00883g00099 Petunia axillaris HOM05D007607 ORTHO05D009603 1.4e-13 80.1 126 44.4
Potri.013G128700 Populus trichocarpa HOM05D007607 ORTHO05D009603 9.4e-13 77.4 136 39.7
Gohir.D10G121500 Gossypium hirsutum HOM05D007607 ORTHO05D009603 1.2e-12 77.0 134 40.3
Gorai.011G133600 Gossypium raimondii HOM05D007607 ORTHO05D009603 1.2e-12 77.0 134 40.3
MD02G1004100 Malus domestica HOM05D007607 ORTHO05D009603 1.2e-12 77.0 147 43.5
Duzib212G0637 Durio zibethinus HOM05D007607 ORTHO05D009603 1.6e-12 76.6 135 43.0
CSS0042213 Camellia sinensis var. sinensis HOM05D007607 ORTHO05D009603 2.1e-12 76.3 107 47.7
Lsat_1_v5_gn_8_9141 Lactuca sativa HOM05D007607 ORTHO05D009603 2.1e-12 76.3 80 57.5
MBI10_g16327_MAGBIO Magnolia biondii HOM05D007607 ORTHO05D009603 2.1e-12 76.3 136 44.1
ECA233G0487 Erigeron canadensis HOM05D007607 ORTHO05D009603 2.7e-12 75.9 73 60.3
MD15G1147800 Malus domestica HOM05D007607 ORTHO05D009603 2.7e-12 75.9 144 43.1
CSS0037895 Camellia sinensis var. sinensis HOM05D007607 ORTHO05D009603 3.6e-12 75.5 107 47.7
AUR62002416 Chenopodium quinoa HOM05D007607 ORTHO05D009603 3.6e-12 75.5 68 63.2
MELO3C011848.2 Cucumis melo HOM05D007607 ORTHO05D009603 4.7e-12 75.1 132 43.9
Ca_18631_v3 Cicer arietinum L. HOM05D004461 ORTHO05D005543 6.1e-12 74.7 137 38.7
Cc03_g14540 Coffea canephora HOM05D007607 ORTHO05D009603 7.9e-12 74.3 132 40.9
Prupe.7G267000 Prunus persica HOM05D007607 ORTHO05D009603 7.9e-12 74.3 145 44.1
Gohir.A10G145500 Gossypium hirsutum HOM05D007607 ORTHO05D009603 1.0e-11 73.9 134 38.8
Lj4g0023803 Lotus japonicus HOM05D007607 ORTHO05D009603 1.0e-11 73.9 136 41.2
Hund12359 Selenicereus undatus HOM05D007607 ORTHO05D009603 1.0e-11 73.9 89 51.7
FvH4_1g00500 Fragaria vesca HOM05D007607 ORTHO05D009603 1.4e-11 73.6 134 44.0
EL10Ac3g06110 Beta vulgaris HOM05D007607 ORTHO05D009603 3.0e-11 72.4 85 51.8
Manes.05G131900 Manihot esculenta HOM05D007607 ORTHO05D009603 3.0e-11 72.4 137 43.1
RcHm_v2.0_Chr2g0085131 Rosa chinensis HOM05D007607 ORTHO05D009603 8.8e-11 70.9 133 43.6
Atru.chr4.1510 Acer truncatum HOM05D007607 ORTHO05D009603 2.0e-10 69.7 106 47.2
Atru.chr4.1481 Acer truncatum HOM05D007607 ORTHO05D009603 2.6e-10 69.3 106 47.2
CsaV3_5G030090 Cucumis sativus L. HOM05D007607 ORTHO05D009603 2.6e-10 69.3 134 43.3
BcaC06g34863 Brassica carinata HOM05D007607 ORTHO05D009603 4.4e-10 68.6 77 55.8
BolC7t42778H Brassica oleracea HOM05D007607 ORTHO05D009603 4.4e-10 68.6 77 55.8
MSTRG.22043 Avicennia marina HOM05D007607 ORTHO05D009603 7.4e-10 67.8 79 50.6
Eucgr.H00285 Eucalyptus grandis HOM05D007607 ORTHO05D009603 7.4e-10 67.8 81 54.3
THA.LOC104813690 Tarenaya hassleriana HOM05D007607 ORTHO05D009603 7.4e-10 67.8 79 55.7
Migut.N03053 Erythranthe guttata HOM05D007607 ORTHO05D009603 9.7e-10 67.4 87 43.7
Solyc12g019550.2 Solanum lycopersicum HOM05D007607 ORTHO05D009603 1.3e-09 67.0 101 41.6
ClCG11G013470 Citrullus lanatus HOM05D007607 ORTHO05D009603 2.2e-09 66.2 136 41.9
Sopen12g009810 Solanum pennellii HOM05D007607 ORTHO05D009603 2.2e-09 66.2 127 37.8
Aa31LG7G5390 Aethionema arabicum HOM05D007607 ORTHO05D009603 2.8e-09 65.9 82 51.2
Glyma.07G206400 Glycine max HOM05D007607 ORTHO05D009603 4.8e-09 65.1 143 40.6
C07p22190 Brassica napus HOM05D007607 ORTHO05D009603 6.3e-09 64.7 77 54.5
Nitab4.5_0000575g0080 Nicotiana tabacum HOM05D007607 ORTHO05D009603 6.3e-09 64.7 93 47.3
SalBow6G6796 Salvia bowleyana HOM05D007607 ORTHO05D009603 6.3e-09 64.7 131 35.1
DCAR_005451 Daucus carota HOM05D007607 ORTHO05D009603 1.1e-08 63.9 83 49.4
A07p15130 Brassica napus HOM05D007607 ORTHO05D009603 1.4e-08 63.5 77 54.5
Thhalv10009074m.g Eutrema salsugineum HOM05D007607 ORTHO05D009603 1.8e-08 63.2 77 54.5
Glyma.02G138600 Glycine max HOM05D007607 ORTHO05D009603 1.8e-08 63.2 147 39.5
Lalb_Chr16g0384371 Lupinus albus HOM05D007607 ORTHO05D009603 1.8e-08 63.2 146 36.3
C05p20400 Brassica napus HOM05D007607 ORTHO05D009603 2.4e-08 62.8 77 53.2
BraA06t24849Z Brassica rapa HOM05D007607 ORTHO05D009603 2.4e-08 62.8 77 53.2
Cpa.g.sc343.4 Carica papaya HOM05D007607 ORTHO05D009603 2.4e-08 62.8 130 40.0
HanXRQChr02g0059081 Helianthus annuus HOM05D007607 ORTHO05D009603 2.4e-08 62.8 79 54.4
PGSC0003DMG400029159 Solanum tuberosum HOM05D007607 ORTHO05D009603 2.4e-08 62.8 127 37.8
BcaB03g14267 Brassica carinata HOM05D007607 ORTHO05D009603 3.1e-08 62.4 77 53.2
A06p17530 Brassica napus HOM05D007607 ORTHO05D009603 4.1e-08 62.0 77 53.2
PGR142G0203 Punica granatum HOM05D007607 ORTHO05D009603 4.1e-08 62.0 133 42.1
AUR62023773 Chenopodium quinoa HOM05D007607 ORTHO05D009603 5.3e-08 61.6 68 55.9
Aqoxy2G03795 Aquilegia oxysepala HOM05D007607 ORTHO05D009603 9.1e-08 60.8 134 39.6
BcaB07g32146 Brassica carinata HOM05D007607 ORTHO05D009603 9.1e-08 60.8 77 51.9
TWI15G0968 Tripterygium wilfordii HOM05D007607 ORTHO05D009603 9.1e-08 60.8 130 39.2
Zm00001eb318610 Zea mays HOM05D007607 ORTHO05D009603 9.1e-08 60.8 42 78.6
MSTRG.24562 Avicennia marina HOM05D007607 ORTHO05D009603 1.2e-07 60.5 73 53.4
BcaC05g26059 Brassica carinata HOM05D007607 ORTHO05D009603 2.6e-07 59.3 77 51.9
BolC5t30734H Brassica oleracea HOM05D007607 ORTHO05D009603 2.6e-07 59.3 77 51.9
arahy.Tifrunner.gnm1.ann1.RJI6AK Arachis hypogaea HOM05D007607 ORTHO05D009603 3.4e-07 58.9 135 41.5
Ah.13g073390 Amaranthus hybridus HOM05D007607 ORTHO05D009603 4.5e-07 58.5 55 61.8
CARHR021860 Cardamine hirsuta HOM05D007607 ORTHO05D009603 4.5e-07 58.5 77 50.6
Carub.0001s2092 Capsella rubella HOM05D007607 ORTHO05D009603 1.0e-06 57.4 82 45.1
TPR.G23536 Trifolium pratense HOM05D007607 ORTHO05D009603 1.0e-06 57.4 142 38.7
unitig_22.g5705 Utricularia gibba HOM05D007607 ORTHO05D009603 1.0e-06 57.4 66 53.0
Sp1g19030 Schrenkiella parvula HOM05D007607 ORTHO05D009603 1.7e-06 56.6 77 49.4
Nitab4.5_0008331g0020 Nicotiana tabacum HOM05D001883 ORTHO05D002184 2.2e-06 56.2 89 41.6
Nn7g37525 Nelumbo nucifera HOM05D007607 ORTHO05D009603 2.9e-06 55.8 56 66.1
Os09g0517000 Oryza sativa ssp. japonica HOM05D007607 ORTHO05D009603 3.8e-06 55.5 38 76.3
VMungo0251G2348 Vigna mungo HOM05D007607 ORTHO05D009603 3.8e-06 55.5 77 46.8


User provided reference genes

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