Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G0388 Papaver somniferum HOM05D031213 ORTHO05D000816 2.3e-47 193.0 108 100.0
PSO017G5575 Papaver somniferum HOM05D031213 ORTHO05D000816 1.2e-40 170.6 103 93.2
PSO170G5225 Papaver somniferum HOM05D031213 ORTHO05D000816 3.6e-37 159.1 108 84.3
PSO170G5965 Papaver somniferum HOM05D031213 ORTHO05D000816 1.7e-31 140.2 108 78.7
PSO017G1231 Papaver somniferum HOM05D000135 ORTHO05D000816 9.5e-30 134.4 108 75.9
Cfa014171 Carpinus fangiana HOM05D000135 ORTHO05D000816 1.2e-11 74.3 84 53.6
Haze_22895 Corylus avellana HOM05D000135 ORTHO05D000816 3.4e-11 72.8 82 52.4
Lj2C97T3 Lonicera japonica HOM05D000135 ORTHO05D000816 3.4e-11 72.8 102 48.0
FvH4_5g26790 Fragaria vesca HOM05D000135 ORTHO05D000816 9.9e-11 71.2 77 48.1
FAN13G2467 Fragaria x ananassa HOM05D000135 ORTHO05D000816 9.9e-11 71.2 89 42.7
FAN18G1887 Fragaria x ananassa HOM05D000135 ORTHO05D000816 1.3e-10 70.9 89 42.7
RcHm_v2.0_Chr7g0217701 Rosa chinensis HOM05D000135 ORTHO05D000816 1.3e-10 70.9 89 41.6
Lj2C97T5 Lonicera japonica HOM05D000135 ORTHO05D000816 4.9e-10 68.9 99 44.4
PGR031G1432 Punica granatum HOM05D000135 ORTHO05D000816 1.1e-09 67.8 114 43.0
FAN08G1719 Fragaria x ananassa HOM05D000135 ORTHO05D000816 1.9e-09 67.0 89 41.6
MBI01_g09380_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 3.2e-09 66.2 81 48.1
CiPaw.07G129800 Carya illinoinensis HOM05D000135 ORTHO05D000816 4.1e-09 65.9 80 48.8
QL02p016339 Quercus lobata HOM05D000135 ORTHO05D000816 4.1e-09 65.9 79 45.6
QL02p016392 Quercus lobata HOM05D000135 ORTHO05D000816 4.1e-09 65.9 79 46.8
QL02p016421 Quercus lobata HOM05D000135 ORTHO05D000816 5.4e-09 65.5 85 45.9
Solyc06g073830.1 Solanum lycopersicum HOM05D000135 ORTHO05D000816 7.1e-09 65.1 89 42.7
Lj2C97T4 Lonicera japonica HOM05D000135 ORTHO05D000816 9.2e-09 64.7 115 38.3
Atru.chr13.16 Acer truncatum HOM05D000135 ORTHO05D000816 1.2e-08 64.3 85 45.9
PGSC0003DMG400005909 Solanum tuberosum HOM05D000135 ORTHO05D000816 2.1e-08 63.5 96 40.6
CiPaw.05G177300 Carya illinoinensis HOM05D000135 ORTHO05D000816 2.7e-08 63.2 82 45.1
Nitab4.5_0007815g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 2.7e-08 63.2 47 59.6
Solyc11g071740.2 Solanum lycopersicum HOM05D000135 ORTHO05D000816 3.5e-08 62.8 43 65.1
Sopen11g029410 Solanum pennellii HOM05D000135 ORTHO05D000816 3.5e-08 62.8 43 65.1
PGSC0003DMG400040538 Solanum tuberosum HOM05D000135 ORTHO05D000816 3.5e-08 62.8 43 65.1
Cpa.g.sc36.91 Carica papaya HOM05D000135 ORTHO05D000816 4.6e-08 62.4 79 45.6
Sopen06g030230 Solanum pennellii HOM05D000135 ORTHO05D000816 6.0e-08 62.0 68 48.5
Duzib093G1260 Durio zibethinus HOM05D000135 ORTHO05D000816 7.8e-08 61.6 95 42.1
Eucgr.F03632 Eucalyptus grandis HOM05D000135 ORTHO05D000816 7.8e-08 61.6 105 39.0
Nitab4.5_0002498g0070 Nicotiana tabacum HOM05D000135 ORTHO05D000816 7.8e-08 61.6 85 43.5
Peaxi162Scf00259g00126 Petunia axillaris HOM05D000135 ORTHO05D000816 7.8e-08 61.6 43 65.1
PGSC0003DMG400045603 Solanum tuberosum HOM05D000135 ORTHO05D000816 7.8e-08 61.6 43 62.8
MBI03_g33916_MAGBIO Magnolia biondii HOM05D000135 ORTHO05D000816 1.0e-07 61.2 45 62.2
Nitab4.5_0002498g0080 Nicotiana tabacum HOM05D000135 ORTHO05D000816 1.0e-07 61.2 91 40.7
Peaxi162Scf00098g00156 Petunia axillaris HOM05D000135 ORTHO05D000816 1.0e-07 61.2 90 40.0
CAN.G1463.22 Capsicum annuum HOM05D000135 ORTHO05D000816 2.3e-07 60.1 97 40.2
FAN04G2622 Fragaria x ananassa HOM05D000135 ORTHO05D000816 3.0e-07 59.7 44 56.8
QL02p016429 Quercus lobata HOM05D000135 ORTHO05D000816 3.0e-07 59.7 80 45.0
PGSC0003DMG400002993 Solanum tuberosum HOM05D000135 ORTHO05D000816 3.0e-07 59.7 43 60.5
CiPaw.08G079300 Carya illinoinensis HOM05D000135 ORTHO05D000816 3.9e-07 59.3 85 40.0
GSVIVG01013467001 Vitis vinifera HOM05D000135 ORTHO05D000816 3.9e-07 59.3 62 48.4
Aqoxy5G00935 Aquilegia oxysepala HOM05D000135 ORTHO05D000816 5.1e-07 58.9 45 62.2
CiPaw.05G177200 Carya illinoinensis HOM05D000135 ORTHO05D000816 8.7e-07 58.2 83 45.8
Nitab4.5_0002183g0010 Nicotiana tabacum HOM05D000135 ORTHO05D000816 8.7e-07 58.2 41 61.0
Manes.05G113200 Manihot esculenta HOM05D000135 ORTHO05D000816 1.1e-06 57.8 42 59.5
Oeu000733.1 Olea europaea HOM05D000135 ORTHO05D000816 1.1e-06 57.8 113 32.7
Sopen11g029420 Solanum pennellii HOM05D000135 ORTHO05D000816 1.1e-06 57.8 43 58.1
PGSC0003DMG400002994 Solanum tuberosum HOM05D000135 ORTHO05D000816 1.1e-06 57.8 43 58.1
CANSAT25G2687 Cannabis sativa HOM05D000135 ORTHO05D000816 1.9e-06 57.0 43 62.8
CAN.G742.23 Capsicum annuum HOM05D000135 ORTHO05D000816 3.3e-06 56.2 90 40.0
Potri.002G001400 Populus trichocarpa HOM05D000135 ORTHO05D000816 3.3e-06 56.2 80 40.0
Solyc11g071760.3 Solanum lycopersicum HOM05D000135 ORTHO05D000816 3.3e-06 56.2 77 41.6
Sopen11g029430 Solanum pennellii HOM05D000135 ORTHO05D000816 3.3e-06 56.2 77 41.6
CAN.G742.5 Capsicum annuum HOM05D000135 ORTHO05D000816 4.3e-06 55.8 42 57.1
COL.COLO4_17166 Corchorus olitorius HOM05D000135 ORTHO05D000816 4.3e-06 55.8 43 58.1
Duzib147G0709 Durio zibethinus HOM05D000135 ORTHO05D000816 4.3e-06 55.8 42 61.9
Potri.005G259900 Populus trichocarpa HOM05D000135 ORTHO05D000816 4.3e-06 55.8 84 38.1
Gohir.D04G078000 Gossypium hirsutum HOM05D000135 ORTHO05D000816 5.6e-06 55.5 43 60.5
Gorai.012G087800 Gossypium raimondii HOM05D000135 ORTHO05D000816 5.6e-06 55.5 43 60.5
Nitab4.5_0000875g0030 Nicotiana tabacum HOM05D000135 ORTHO05D000816 5.6e-06 55.5 97 36.1
Sc09g0007590 Simmondsia chinensis HOM05D000135 ORTHO05D000816 5.6e-06 55.5 45 57.8
Gohir.A05G339500 Gossypium hirsutum HOM05D000135 ORTHO05D000816 9.6e-06 54.7 43 60.5
Thecc.04G033300 Theobroma cacao HOM05D000135 ORTHO05D000816 9.6e-06 54.7 42 61.9


User provided reference genes

Program Settings