Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G0320 Papaver somniferum HOM05D005616 ORTHO05D006975 1.0e-131 473.4 236 100.0
PSO675G8834 Papaver somniferum HOM05D005616 ORTHO05D006975 1.5e-122 443.0 236 93.2
PSO384G3782 Papaver somniferum HOM05D005616 ORTHO05D006975 3.3e-114 415.2 228 89.0
PSO339G0515 Papaver somniferum HOM05D005616 ORTHO05D006975 4.8e-113 411.4 228 88.6
TAR623G1070 Trochodendron aralioides HOM05D005616 ORTHO05D006975 3.2e-93 345.5 228 73.7
FAN03G0254 Fragaria x ananassa HOM05D005616 ORTHO05D006975 9.3e-93 344.0 228 74.6
Haze_17234 Corylus avellana HOM05D005616 ORTHO05D006975 1.2e-92 343.6 226 74.8
FAN07G0068 Fragaria x ananassa HOM05D005616 ORTHO05D006975 1.6e-92 343.2 228 75.0
Dinv10614 Davidia involucrata HOM05D005616 ORTHO05D006975 1.0e-91 340.5 227 70.9
Lj8A66T51 Lonicera japonica HOM05D005616 ORTHO05D006975 1.0e-91 340.5 218 77.1
Prupe.2G251100 Prunus persica HOM05D005616 ORTHO05D006975 1.0e-91 340.5 217 76.5
FAN01G0309 Fragaria x ananassa HOM05D001932 ORTHO05D006975 2.3e-91 339.3 228 73.2
RcHm_v2.0_Chr1g0370411 Rosa chinensis HOM05D005616 ORTHO05D006975 6.7e-91 337.8 221 75.6
MBI19_g36756_MAGBIO Magnolia biondii HOM05D005616 ORTHO05D006975 1.5e-90 336.7 231 72.3
FvH4_7g24571 Fragaria vesca HOM05D005616 ORTHO05D006975 2.5e-90 335.9 228 74.1
FAN06G2993 Fragaria x ananassa HOM05D001932 ORTHO05D006975 2.5e-90 335.9 228 74.1
FAN10G3671 Fragaria x ananassa HOM05D005616 ORTHO05D006975 2.5e-90 335.9 228 73.2
Nitab4.5_0005018g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 2.5e-90 335.9 208 77.9
GSVIVG01032805001 Vitis vinifera HOM05D005616 ORTHO05D006975 2.5e-90 335.9 228 72.4
Nitab4.5_0003454g0010 Nicotiana tabacum HOM05D005616 ORTHO05D006975 3.3e-90 335.5 208 78.4
Manes.10G011400 Manihot esculenta HOM05D005616 ORTHO05D006975 5.7e-90 334.7 213 76.1
Peaxi162Scf00284g01041 Petunia axillaris HOM05D005616 ORTHO05D006975 9.6e-90 334.0 208 78.4
Cfa001309 Carpinus fangiana HOM05D005616 ORTHO05D006975 1.3e-89 333.6 206 79.1
FvH4_4g21980 Fragaria vesca HOM05D005616 ORTHO05D006975 1.3e-89 333.6 228 73.2
Thecc.10G015200 Theobroma cacao HOM05D005616 ORTHO05D006975 2.1e-89 332.8 209 77.5
Ciclev10032361m.g Citrus clementina HOM05D005616 ORTHO05D006975 2.8e-89 332.4 217 74.7
FAN12G0831 Fragaria x ananassa HOM05D005616 ORTHO05D006975 3.7e-89 332.0 228 72.8
TWI09G1208 Tripterygium wilfordii HOM05D005616 ORTHO05D006975 3.7e-89 332.0 217 74.2
Lj1g0010131 Lotus japonicus HOM05D005616 ORTHO05D006975 4.8e-89 331.6 228 71.1
Eucgr.J00201 Eucalyptus grandis HOM05D005616 ORTHO05D006975 6.2e-89 331.3 221 73.8
Solyc02g076760.3 Solanum lycopersicum HOM05D005616 ORTHO05D006975 6.2e-89 331.3 227 71.4
PGSC0003DMG400010237 Solanum tuberosum HOM05D005616 ORTHO05D006975 8.2e-89 330.9 227 71.8
DCAR_023439 Daucus carota HOM05D005616 ORTHO05D006975 1.1e-88 330.5 220 73.6
HanXRQChr08g0222401 Helianthus annuus HOM05D005616 ORTHO05D006975 1.1e-88 330.5 222 72.5
Sopen02g021670 Solanum pennellii HOM05D005616 ORTHO05D006975 1.4e-88 330.1 227 70.9
Lj6g0010776 Lotus japonicus HOM05D005616 ORTHO05D006975 1.8e-88 329.7 228 70.2
Lalb_Chr08g0231681 Lupinus albus HOM05D005616 ORTHO05D006975 2.4e-88 329.3 213 75.1
Medtr3g449480 Medicago truncatula HOM05D005616 ORTHO05D006975 2.4e-88 329.3 228 71.5
Gohir.A10G237500 Gossypium hirsutum HOM05D005616 ORTHO05D006975 4.1e-88 328.6 210 75.7
Medtr3g070890 Medicago truncatula HOM05D005616 ORTHO05D006975 4.1e-88 328.6 228 71.1
Peaxi162Scf00801g00729 Petunia axillaris HOM05D005616 ORTHO05D006975 6.9e-88 327.8 208 76.0
vmacro06962 Vaccinium macrocarpon HOM05D005616 ORTHO05D006975 6.9e-88 327.8 218 72.0
Sopen06g017380 Solanum pennellii HOM05D005616 ORTHO05D006975 9.0e-88 327.4 207 76.8
Lsat_1_v5_gn_8_11701 Lactuca sativa HOM05D005616 ORTHO05D006975 1.2e-87 327.0 210 75.2
CSS0029859 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 1.5e-87 326.6 218 72.0
MSTRG.8961 Avicennia marina HOM05D005616 ORTHO05D006975 2.0e-87 326.2 227 72.2
Psat5g129880 Pisum sativum HOM05D005616 ORTHO05D006975 2.0e-87 326.2 210 76.2
MD07G1223000 Malus domestica HOM05D005616 ORTHO05D006975 3.4e-87 325.5 218 73.9
Gorai.012G116600 Gossypium raimondii HOM05D005616 ORTHO05D006975 4.5e-87 325.1 207 76.3
Potri.012G145600 Populus trichocarpa HOM05D005616 ORTHO05D006975 5.8e-87 324.7 227 71.8
Gohir.A04G093400 Gossypium hirsutum HOM05D005616 ORTHO05D006975 7.6e-87 324.3 210 75.2
Duzib128G0549 Durio zibethinus HOM05D005616 ORTHO05D006975 1.0e-86 323.9 217 71.9
TPR.G11210 Trifolium pratense HOM05D005616 ORTHO05D006975 1.0e-86 323.9 210 74.8
Aqoxy4G02536 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 1.3e-86 323.6 227 71.4
Ca_15132_v3 Cicer arietinum L. HOM05D005616 ORTHO05D006975 1.7e-86 323.2 210 74.3
Glyma.18G026400 Glycine max HOM05D005616 ORTHO05D006975 2.2e-86 322.8 210 74.3
Solyc06g051410.4 Solanum lycopersicum HOM05D005616 ORTHO05D006975 2.9e-86 322.4 207 75.8
PGSC0003DMG401008474 Solanum tuberosum HOM05D005616 ORTHO05D006975 2.9e-86 322.4 207 75.8
Phvul.001G244100 Phaseolus vulgaris HOM05D005616 ORTHO05D006975 5.0e-86 321.6 211 73.5
Potri.008G069500 Populus trichocarpa HOM05D005616 ORTHO05D006975 6.5e-86 321.2 221 72.4
Glyma.11G230900 Glycine max HOM05D005616 ORTHO05D006975 1.1e-85 320.5 210 74.3
CANSAT78G1638 Cannabis sativa HOM05D005616 ORTHO05D006975 3.2e-85 318.9 228 69.3
EL10Ac1g02124 Beta vulgaris HOM05D005616 ORTHO05D006975 4.2e-85 318.5 227 68.3
CSS0002000 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 4.2e-85 318.5 206 72.8
SGA_v2.0_scaffold60G21012 Striga asiatica HOM05D005616 ORTHO05D006975 5.5e-85 318.2 222 68.9
Migut.F00691 Erythranthe guttata HOM05D005616 ORTHO05D006975 7.1e-85 317.8 227 68.7
ECA233G4091 Erigeron canadensis HOM05D005616 ORTHO05D006975 1.2e-84 317.0 210 72.4
SalBow6G5046 Salvia bowleyana HOM05D005616 ORTHO05D006975 1.2e-84 317.0 223 69.5
arahy.Tifrunner.gnm1.ann1.R92L2M Arachis hypogaea HOM05D005616 ORTHO05D006975 1.6e-84 316.6 205 74.6
VMungo1383G1171 Vigna mungo HOM05D005616 ORTHO05D006975 2.1e-84 316.2 207 74.4
arahy.Tifrunner.gnm1.ann1.061K9L Arachis hypogaea HOM05D005616 ORTHO05D006975 2.7e-84 315.8 212 72.6
SGA_v2.0_scaffold105G30487 Striga asiatica HOM05D005616 ORTHO05D006975 2.7e-84 315.8 216 70.4
Aa31LG11G6640 Aethionema arabicum HOM05D005616 ORTHO05D006975 3.5e-84 315.5 210 72.4
AL6G15480 Arabidopsis lyrata HOM05D005616 ORTHO05D006975 3.5e-84 315.5 213 71.8
Sc10g0002410 Simmondsia chinensis HOM05D005616 ORTHO05D006975 4.6e-84 315.1 228 66.2
Cc02_g06410 Coffea canephora HOM05D005616 ORTHO05D006975 6.1e-84 314.7 207 73.4
Oeu004695.1 Olea europaea HOM05D005616 ORTHO05D006975 1.8e-83 313.2 228 67.5
Carub.0006s0449 Capsella rubella HOM05D005616 ORTHO05D006975 2.3e-83 312.8 227 67.8
Sabra08G0051100 Salix brachista HOM05D005616 ORTHO05D006975 3.9e-83 312.0 221 70.1
AT1G07780 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 1.1e-82 310.5 213 70.4
AT5G05590 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 1.5e-82 310.1 213 70.4
MELO3C026789.2 Cucumis melo HOM05D005616 ORTHO05D006975 1.5e-82 310.1 217 69.1
AUR62012260 Chenopodium quinoa HOM05D005616 ORTHO05D006975 1.9e-82 309.7 213 70.9
CSS0019139 Camellia sinensis var. sinensis HOM05D005616 ORTHO05D006975 3.3e-82 308.9 206 71.4
CARHR034480 Cardamine hirsuta HOM05D005616 ORTHO05D006975 3.3e-82 308.9 214 71.5
Thhalv10014368m.g Eutrema salsugineum HOM05D005616 ORTHO05D006975 5.7e-82 308.1 210 72.4
CiPaw.02G193000 Carya illinoinensis HOM05D005616 ORTHO05D006975 1.3e-81 307.0 197 76.1
THA.LOC104816542 Tarenaya hassleriana HOM05D005616 ORTHO05D006975 1.6e-81 306.6 210 70.5
BcaB05g21694 Brassica carinata HOM05D005616 ORTHO05D006975 3.7e-81 305.4 213 71.4
PGR044G0338 Punica granatum HOM05D005616 ORTHO05D006975 4.8e-81 305.1 204 75.0
ClCG07G004280 Citrullus lanatus HOM05D005616 ORTHO05D006975 8.2e-81 304.3 228 65.8
Sp6g37270 Schrenkiella parvula HOM05D005616 ORTHO05D006975 8.2e-81 304.3 213 70.0
BolC2t06207H Brassica oleracea HOM05D005616 ORTHO05D006975 1.1e-80 303.9 213 70.9
CsaV3_5G010220 Cucumis sativus L. HOM05D005616 ORTHO05D006975 1.1e-80 303.9 217 67.3
Gohir.D10G249200 Gossypium hirsutum HOM05D005616 ORTHO05D006975 1.4e-80 303.5 210 71.4
BcaB05g21698 Brassica carinata HOM05D005616 ORTHO05D006975 1.8e-80 303.1 213 70.9
Nitab4.5_0010803g0020 Nicotiana tabacum HOM05D005616 ORTHO05D006975 1.8e-80 303.1 205 73.2
Sed0025730 Sechium edule HOM05D005616 ORTHO05D006975 2.4e-80 302.8 228 65.4
AUR62022893 Chenopodium quinoa HOM05D005616 ORTHO05D006975 3.1e-80 302.4 227 66.5
Gorai.011G289500 Gossypium raimondii HOM05D005616 ORTHO05D006975 3.1e-80 302.4 210 71.0
BraA02t04856Z Brassica rapa HOM05D005616 ORTHO05D006975 6.9e-80 301.2 213 70.0
Hund13869 Selenicereus undatus HOM05D005616 ORTHO05D006975 2.0e-79 299.7 212 68.4
Aqoxy5G03614 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 2.6e-79 299.3 195 75.4
ATR0730G169 Amborella trichopoda HOM05D005616 ORTHO05D006975 1.6e-76 290.0 228 62.7
SHI03421 Sapria himalayana HOM05D005616 ORTHO05D006975 6.1e-76 288.1 220 64.5
COL.COLO4_25743 Corchorus olitorius HOM05D005616 ORTHO05D006975 1.0e-75 287.3 192 71.9
Gohir.D04G132700 Gossypium hirsutum HOM05D005616 ORTHO05D006975 3.0e-75 285.8 180 76.1
Os02g0266000 Oryza sativa ssp. japonica HOM05D005616 ORTHO05D006975 1.5e-74 283.5 208 65.4
HPP92_011508 Vanilla planifolia HOM05D005616 ORTHO05D006975 4.1e-72 275.4 208 64.9
Zm00001eb281510 Zea mays HOM05D005616 ORTHO05D006975 5.3e-72 275.0 222 61.3
unitig_0.g2023 Utricularia gibba HOM05D005616 ORTHO05D006975 5.9e-71 271.6 197 68.0
Zm00001eb203980 Zea mays HOM05D005616 ORTHO05D006975 2.9e-70 269.2 216 62.0
SEGI_33372 Sequoiadendron giganteum HOM05D005616 ORTHO05D006975 6.1e-68 261.5 207 63.3
AUR62028615 Chenopodium quinoa HOM05D005616 ORTHO05D006975 1.1e-66 257.3 236 59.3
TAR369G1110 Trochodendron aralioides HOM05D005616 ORTHO05D006975 3.1e-64 249.2 155 79.4
Aqoxy332s005 Aquilegia oxysepala HOM05D005616 ORTHO05D006975 7.7e-63 244.6 180 69.4
CDE02G4500 Ceratophyllum demersum HOM05D005293 ORTHO05D006764 8.8e-59 231.1 225 56.0
Pp3c17_23550 Physcomitrium patens HOM05D005616 ORTHO05D006975 2.8e-57 226.1 216 52.8
AagrBONN_evm.TU.Sc2ySwM_228.1039 Anthoceros agrestis HOM05D005616 ORTHO05D006975 9.1e-56 221.1 212 51.9
Mapoly0041s0067 Marchantia polymorpha HOM05D005616 ORTHO05D006975 1.3e-54 217.2 207 53.1
Cre12.g519000 Chlamydomonas reinhardtii HOM05D005616 ORTHO05D006975 2.7e-52 209.5 222 46.8
CAN.G370.83 Capsicum annuum HOM05D002257 ORTHO05D006975 2.6e-50 203.0 136 77.2
SMO364G0619 Selaginella moellendorffii HOM05D005616 ORTHO05D006975 3.7e-49 199.1 212 50.5
AT1G29410 Arabidopsis thaliana HOM05D005616 ORTHO05D006975 4.1e-48 195.7 138 71.0
C02p02440 Brassica napus HOM05D005616 ORTHO05D006975 7.7e-47 191.4 138 71.0
Dinv21739 Davidia involucrata HOM05D005616 ORTHO05D006975 1.0e-46 191.0 119 72.3
MCO02G328 Micromonas commoda HOM05D005616 ORTHO05D006975 2.7e-44 183.0 233 38.6
CiPaw.01G059100 Carya illinoinensis HOM05D005616 ORTHO05D006975 1.7e-41 173.7 109 79.8
PRCOL_00006470 Prasinoderma coloniale HOM05D005616 ORTHO05D006975 7.2e-37 158.3 213 39.9
Potri.014G188400 Populus trichocarpa HOM05D005616 ORTHO05D006975 1.1e-29 134.4 130 56.2
FAN17G0984 Fragaria x ananassa HOM05D002859 ORTHO05D003120 2.5e-29 133.3 94 72.3
Nn2g13147 Nelumbo nucifera HOM05D005616 ORTHO05D006975 2.5e-29 133.3 82 80.5
DCAR_029632 Daucus carota HOM05D000090 ORTHO05D001584 3.2e-24 116.3 91 62.6
MSTRG.13829 Avicennia marina HOM05D005616 ORTHO05D006975 3.9e-22 109.4 88 68.2
CBR_g37169 Chara braunii HOM05D005616 ORTHO05D006975 3.4e-18 96.3 144 36.1
Dinv21738 Davidia involucrata HOM05D005616 ORTHO05D006975 4.9e-17 92.4 64 71.9
Atru.chr12.48 Acer truncatum HOM05D005616 ORTHO05D006975 1.1e-13 81.3 51 76.5
Cfa025268 Carpinus fangiana HOM05D003366 ORTHO05D004562 2.2e-09 67.0 251 29.5
Atru.chr7.2145 Acer truncatum HOM05D005616 ORTHO05D006975 4.9e-09 65.9 44 72.7
SGA_v2.0_scaffold250G44984 Striga asiatica HOM05D005616 ORTHO05D401959 2.7e-07 60.1 90 42.2


User provided reference genes

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