Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G0293 Papaver somniferum HOM05D004969 ORTHO05D006085 5.4e-243 844.0 443 100.0
PSO170G6732 Papaver somniferum HOM05D004969 ORTHO05D006085 8.9e-230 800.0 443 95.7
MBI06_g36481_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 5.2e-129 465.3 441 62.6
GSVIVG01025999001 Vitis vinifera HOM05D004969 ORTHO05D006085 2.9e-127 459.5 459 61.0
TAR381G0816 Trochodendron aralioides HOM05D004969 ORTHO05D006085 1.6e-125 453.8 452 62.2
Aqoxy2G02250 Aquilegia oxysepala HOM05D004969 ORTHO05D006085 9.8e-120 434.5 457 58.6
Lalb_Chr18g0053961 Lupinus albus HOM05D004969 ORTHO05D006085 7.8e-117 424.9 458 59.8
Actinidia23029 Actinidia chinensis HOM05D004969 ORTHO05D006085 1.3e-116 424.1 461 57.5
Migut.N03359 Erythranthe guttata HOM05D004969 ORTHO05D006085 2.3e-116 423.3 442 61.5
Peaxi162Scf00391g00434 Petunia axillaris HOM05D004969 ORTHO05D006085 3.0e-116 422.9 449 60.6
PGR042G0690 Punica granatum HOM05D004969 ORTHO05D006085 3.0e-116 422.9 385 64.2
CDE04G1977 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 1.5e-115 420.6 451 56.8
CSS0003565 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 1.9e-115 420.2 461 58.1
Prupe.2G102700 Prunus persica HOM05D004969 ORTHO05D006085 5.6e-115 418.7 415 61.4
CSS0028019 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 2.8e-114 416.4 461 57.7
Potri.017G129800 Populus trichocarpa HOM05D004969 ORTHO05D006085 4.7e-114 415.6 443 58.7
Ca_15098_v3 Cicer arietinum L. HOM05D004969 ORTHO05D006085 8.1e-114 414.8 447 57.7
MD07G1079600 Malus domestica HOM05D004969 ORTHO05D006085 1.1e-113 414.5 465 57.4
Potri.004G087100 Populus trichocarpa HOM05D004969 ORTHO05D006085 1.1e-113 414.5 447 56.8
MSTRG.22462 Avicennia marina HOM05D004969 ORTHO05D006085 3.1e-113 412.9 442 56.6
Manes.02G076800 Manihot esculenta HOM05D004969 ORTHO05D006085 4.0e-113 412.5 477 56.8
MD02G1235900 Malus domestica HOM05D004969 ORTHO05D006085 6.8e-113 411.8 465 55.5
TWI53G0342 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 1.7e-111 407.1 458 55.9
CANSAT78G2392 Cannabis sativa HOM05D004969 ORTHO05D006085 2.2e-111 406.8 436 58.7
CAN.G2.7 Capsicum annuum HOM05D004969 ORTHO05D006085 3.7e-111 406.0 456 57.2
Duzib211G0057 Durio zibethinus HOM05D004969 ORTHO05D006085 3.7e-111 406.0 442 57.7
Lalb_Chr15g0085491 Lupinus albus HOM05D004969 ORTHO05D006085 3.7e-111 406.0 446 58.5
Nn5g27434 Nelumbo nucifera HOM05D004969 ORTHO05D006085 4.9e-111 405.6 447 59.1
Duzib133G0278 Durio zibethinus HOM05D004969 ORTHO05D006085 6.4e-111 405.2 452 58.0
Gorai.001G088300 Gossypium raimondii HOM05D004969 ORTHO05D006085 6.4e-111 405.2 445 59.1
Phvul.006G083300 Phaseolus vulgaris HOM05D004969 ORTHO05D006085 1.1e-110 404.4 445 56.6
Gohir.A07G077900 Gossypium hirsutum HOM05D004969 ORTHO05D006085 1.9e-110 403.7 369 65.0
Cpa.g.sc116.57 Carica papaya HOM05D004969 ORTHO05D006085 2.4e-110 403.3 445 55.7
HanXRQChr02g0036761 Helianthus annuus HOM05D004969 ORTHO05D006085 4.1e-110 402.5 468 55.8
Lj6g0017586 Lotus japonicus HOM05D004969 ORTHO05D006085 5.4e-110 402.1 447 56.4
Dinv41780 Davidia involucrata HOM05D004969 ORTHO05D006085 7.1e-110 401.7 420 61.0
HanXRQChr04g0102091 Helianthus annuus HOM05D004969 ORTHO05D006085 7.1e-110 401.7 465 56.8
TWI77G0063 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 7.1e-110 401.7 468 55.8
ATR1136G165 Amborella trichopoda HOM05D004969 ORTHO05D006085 1.2e-109 401.0 428 57.0
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 2.7e-109 399.8 391 61.4
Nitab4.5_0003818g0050 Nicotiana tabacum HOM05D004969 ORTHO05D006085 6.0e-109 398.7 476 56.9
Solyc11g020300.2 Solanum lycopersicum HOM05D004969 ORTHO05D006085 7.8e-109 398.3 463 56.6
RcHm_v2.0_Chr1g0339281 Rosa chinensis HOM05D004969 ORTHO05D006085 3.0e-108 396.4 414 59.7
Medtr3g063200 Medicago truncatula HOM05D004969 ORTHO05D006085 3.9e-108 396.0 449 56.3
VMungo0540G2242 Vigna mungo HOM05D004969 ORTHO05D006085 1.1e-107 394.4 447 55.5
CsaV3_5G020190 Cucumis sativus L. HOM05D004969 ORTHO05D006085 1.5e-107 394.0 446 56.5
FvH4_7g07530 Fragaria vesca HOM05D004969 ORTHO05D006085 1.5e-107 394.0 400 60.8
Sed0015915 Sechium edule HOM05D004969 ORTHO05D006085 3.3e-107 392.9 448 56.7
Nitab4.5_0000365g0150 Nicotiana tabacum HOM05D004969 ORTHO05D006085 5.6e-107 392.1 460 56.5
Cfa005580 Carpinus fangiana HOM05D004969 ORTHO05D006085 7.3e-107 391.7 397 58.9
Eucgr.A02100 Eucalyptus grandis HOM05D004969 ORTHO05D006085 7.3e-107 391.7 397 59.4
Psat5g144880 Pisum sativum HOM05D004969 ORTHO05D006085 1.2e-106 391.0 447 54.4
Glyma.11G202700 Glycine max HOM05D004969 ORTHO05D006085 4.7e-106 389.0 448 56.0
Sopen11g010590 Solanum pennellii HOM05D004969 ORTHO05D006085 4.7e-106 389.0 386 61.4
Cc10_g11320 Coffea canephora HOM05D004969 ORTHO05D006085 6.2e-106 388.7 446 54.0
CiPaw.06G151300 Carya illinoinensis HOM05D004969 ORTHO05D006085 1.1e-105 387.9 387 59.4
MELO3C025065.2 Cucumis melo HOM05D004969 ORTHO05D006085 3.1e-105 386.3 446 56.7
Carub.0006s1483 Capsella rubella HOM05D004969 ORTHO05D006085 4.0e-105 386.0 459 52.7
Rhsim12G0005600 Rhododendron simsii HOM05D004969 ORTHO05D006085 1.2e-104 384.4 515 51.5
Thecc.04G114600 Theobroma cacao HOM05D004969 ORTHO05D006085 1.5e-104 384.0 453 55.0
ECA247G1475 Erigeron canadensis HOM05D004969 ORTHO05D006085 5.8e-104 382.1 406 57.6
Glyma.18G048200 Glycine max HOM05D004969 ORTHO05D006085 5.8e-104 382.1 448 55.4
Sabra17G0108000 Salix brachista HOM05D004969 ORTHO05D006085 6.4e-103 378.6 403 58.1
Thhalv10013528m.g Eutrema salsugineum HOM05D004969 ORTHO05D006085 3.2e-102 376.3 472 51.3
FAN03G1223 Fragaria x ananassa HOM05D004969 ORTHO05D006085 3.0e-100 369.8 449 53.2
A10p22590 Brassica napus HOM05D004969 ORTHO05D006085 1.9e-99 367.1 470 49.4
BraA10t44321Z Brassica rapa HOM05D004969 ORTHO05D006085 1.9e-99 367.1 470 49.4
BolC2t06766H Brassica oleracea HOM05D004969 ORTHO05D006085 3.6e-98 362.8 460 50.7
Lsat_1_v5_gn_1_25461 Lactuca sativa HOM05D004969 ORTHO05D006085 4.8e-98 362.5 455 52.3
BraA02t05337Z Brassica rapa HOM05D004969 ORTHO05D006085 2.6e-96 356.7 467 49.3
Ciclev10011792m.g Citrus clementina HOM05D004969 ORTHO05D006085 7.6e-96 355.1 445 51.0
THA.LOC104827189 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 1.7e-95 354.0 463 50.5
Sp6g27550 Schrenkiella parvula HOM05D004969 ORTHO05D006085 6.4e-95 352.1 460 49.3
Sc23g0001560 Simmondsia chinensis HOM05D004969 ORTHO05D006085 1.2e-93 347.8 461 50.1
BolC9t58883H Brassica oleracea HOM05D004969 ORTHO05D006085 1.7e-92 344.0 465 47.1
DCAR_014392 Daucus carota HOM05D004969 ORTHO05D006085 8.7e-92 341.7 371 58.8
Gohir.D07G082700 Gossypium hirsutum HOM05D004969 ORTHO05D006085 1.9e-91 340.5 312 64.4
HPP92_004464 Vanilla planifolia HOM05D004969 ORTHO05D006085 5.6e-91 339.0 459 48.1
Os04g0439900 Oryza sativa ssp. japonica HOM05D004969 ORTHO05D006085 1.3e-90 337.8 378 54.0
BcaB08g36833 Brassica carinata HOM05D004969 ORTHO05D006085 2.1e-90 337.0 465 47.7
C09p60500 Brassica napus HOM05D004969 ORTHO05D006085 1.5e-88 330.9 467 46.3
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 2.0e-88 330.5 463 47.5
Hma1.2p1_0342F.1_g130660 Hydrangea macrophylla HOM05D004969 ORTHO05D006085 2.6e-88 330.1 314 64.3
Zm00001eb082230 Zea mays HOM05D004969 ORTHO05D006085 2.6e-88 330.1 457 49.9
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 4.5e-88 329.3 437 49.2
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 7.6e-88 328.6 454 48.0
THA.LOC104802933 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 6.4e-87 325.5 458 47.6
ClCG01G008270 Citrullus lanatus HOM05D004969 ORTHO05D006085 8.4e-87 325.1 446 51.8
AT5G16620 Arabidopsis thaliana HOM05D004969 ORTHO05D006085 1.2e-85 321.2 457 46.8
AL6G27590 Arabidopsis lyrata HOM05D004969 ORTHO05D006085 2.7e-85 320.1 458 46.9
unitig_8.g3641 Utricularia gibba HOM05D004969 ORTHO05D006085 4.6e-85 319.3 456 49.1
CDE07G1303 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 3.0e-84 316.6 384 51.6
PGSC0003DMG400023281 Solanum tuberosum HOM05D004969 ORTHO05D006085 6.7e-84 315.5 263 70.0
HPP92_004490 Vanilla planifolia HOM05D004969 ORTHO05D006085 5.6e-83 312.4 450 47.3
FAN06G2886 Fragaria x ananassa HOM05D004969 ORTHO05D006085 3.1e-81 306.6 406 53.0
Aa31LG11G13030 Aethionema arabicum HOM05D004969 ORTHO05D006085 5.3e-81 305.8 462 44.8
CiPaw.05G038800 Carya illinoinensis HOM05D004969 ORTHO05D006085 6.9e-81 305.4 390 52.8
SEGI_27085 Sequoiadendron giganteum HOM05D004969 ORTHO05D006085 9.0e-81 305.1 363 52.3
FAN10G2597 Fragaria x ananassa HOM05D004969 ORTHO05D006085 1.3e-79 301.2 406 52.0
Pp3c4_25740 Physcomitrium patens HOM05D004969 ORTHO05D006085 1.7e-79 300.8 355 53.5
Mapoly0007s0079 Marchantia polymorpha HOM05D004969 ORTHO05D006085 2.9e-79 300.1 417 48.7
arahy.Tifrunner.gnm1.ann1.70N71I Arachis hypogaea HOM05D004969 ORTHO05D006085 3.8e-79 299.7 342 53.5
SGA_v2.0_scaffold25G11066 Striga asiatica HOM05D004969 ORTHO05D007712 8.4e-79 298.5 301 62.1
CARHR196580 Cardamine hirsuta HOM05D004969 ORTHO05D006085 3.9e-76 289.7 323 53.3
Atru.chr1.1922 Acer truncatum HOM05D004969 ORTHO05D006085 1.1e-75 288.1 312 56.1
Pp3c26_4000 Physcomitrium patens HOM05D004969 ORTHO05D006085 1.5e-75 287.7 371 49.1
MSTRG.1535 Avicennia marina HOM05D004969 ORTHO05D006085 1.6e-74 284.3 441 46.0
vmacro00973 Vaccinium macrocarpon HOM05D004969 ORTHO05D006085 3.7e-74 283.1 644 37.1
AUR62023559 Chenopodium quinoa HOM05D004969 ORTHO05D006085 1.5e-72 277.7 460 44.3
Zm00001eb422870 Zea mays HOM05D004969 ORTHO05D006085 2.2e-71 273.9 441 46.9
AagrBONN_evm.TU.Sc2ySwM_362.1764 Anthoceros agrestis HOM05D004969 ORTHO05D006085 1.6e-69 267.7 364 47.8
Oeu064082.1 Olea europaea HOM05D004969 ORTHO05D006085 7.9e-69 265.4 305 55.1
Hund27125 Selenicereus undatus HOM05D004969 ORTHO05D006085 1.0e-68 265.0 602 38.0
Hund27130 Selenicereus undatus HOM05D004969 ORTHO05D006085 1.0e-68 265.0 602 38.0
Sabra04G0058000 Salix brachista HOM05D004969 ORTHO05D006085 8.5e-63 245.4 213 62.0
QL11p019695 Quercus lobata HOM05D004969 ORTHO05D006085 7.9e-61 238.8 490 37.6
Hund16770 Selenicereus undatus HOM05D004969 ORTHO05D006085 1.1e-59 235.0 204 61.3
arahy.Tifrunner.gnm1.ann1.247CUK Arachis hypogaea HOM05D004969 ORTHO05D006085 3.3e-59 233.4 318 49.1
CBR_g49427 Chara braunii HOM05D004969 ORTHO05D006085 1.7e-55 221.1 307 47.6
SMO367G0370 Selaginella moellendorffii HOM05D004969 ORTHO05D006085 2.9e-55 220.3 367 41.1
MBI06_g45016_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 2.3e-52 210.7 317 50.8
Gohir.A07G173560 Gossypium hirsutum HOM05D004969 ORTHO05D006085 1.4e-49 201.4 117 84.6
HanXRQChr02g0036751 Helianthus annuus HOM05D004969 ORTHO05D006085 7.7e-48 195.7 300 44.3
TPR.G37348 Trifolium pratense HOM05D004969 ORTHO05D006085 5.0e-47 193.0 347 44.4
HanXRQChr02g0036561 Helianthus annuus HOM05D004969 ORTHO05D006085 1.2e-45 188.3 455 35.2
TPR.G14671 Trifolium pratense HOM05D004969 ORTHO05D006085 2.7e-45 187.2 100 87.0
Cre12.g508000 Chlamydomonas reinhardtii HOM05D004969 ORTHO05D006085 9.8e-35 152.1 165 46.1
EL10Ac1g00146 Beta vulgaris HOM05D004969 ORTHO05D006085 1.4e-33 148.3 403 37.5
FAN01G1532 Fragaria x ananassa HOM05D004969 ORTHO05D006085 4.2e-30 136.7 317 39.1
Sabra04G0057900 Salix brachista HOM05D004969 ORTHO05D006085 1.2e-29 135.2 251 45.0
MCO11G221 Micromonas commoda HOM05D004969 ORTHO05D006085 8.0e-29 132.5 171 41.5
CDE07G1829 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 1.3e-26 125.2 69 88.4
FAN15G1524 Fragaria x ananassa HOM05D004969 ORTHO05D006085 9.1e-25 119.0 74 83.8
THA.LOC104802935 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 1.6e-21 108.2 332 35.2
Hund31138 Selenicereus undatus HOM05D004969 ORTHO05D006085 1.0e-20 105.5 191 45.0
Oeu000537.1 Olea europaea HOM05D004969 ORTHO05D006085 1.8e-20 104.8 69 76.8
MELO3C025953.2 Cucumis melo HOM05D004969 ORTHO05D006085 3.0e-20 104.0 64 75.0
Hund16636 Selenicereus undatus HOM05D004969 ORTHO05D006085 3.0e-20 104.0 194 45.4
FvH4_2g09382 Fragaria vesca HOM05D004969 ORTHO05D006085 4.9e-18 96.7 149 44.3
AUR62004590 Chenopodium quinoa HOM05D004969 ORTHO05D006085 4.1e-17 93.6 195 42.1
Hund14746 Selenicereus undatus HOM05D004969 ORTHO05D006085 1.9e-14 84.7 51 74.5
FvH4_2g09383 Fragaria vesca HOM05D004969 ORTHO05D006085 3.3e-14 84.0 47 83.0
CARHR196590 Cardamine hirsuta HOM05D004969 ORTHO05D006085 1.6e-13 81.6 140 45.0
SHI30104 Sapria himalayana HOM05D007291 ORTHO05D009038 2.2e-10 71.2 65 47.7
Cre12.g490650 Chlamydomonas reinhardtii HOM05D004969 ORTHO05D006085 5.4e-09 66.6 138 26.8
MD02G1236200 Malus domestica HOM05D005192 ORTHO05D006023 1.2e-08 65.5 146 35.6
MELO3C033346.2 Cucumis melo HOM05D004969 ORTHO05D044988 2.3e-07 61.2 52 59.6
HPP92_017745 Vanilla planifolia HOM05D004969 ORTHO05D006085 2.3e-07 61.2 150 36.7
Haze_10772 Corylus avellana HOM05D004969 ORTHO05D006085 9.5e-06 55.8 100 50.0


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