Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G0268 Papaver somniferum HOM05D005998 ORTHO05D007664 3.8e-178 628.6 469 100.0
PSO017G4719 Papaver somniferum HOM05D005998 ORTHO05D007664 1.0e-82 311.6 487 66.9
PSO017G6716 Papaver somniferum HOM05D005998 ORTHO05D007664 7.1e-76 288.9 417 58.0
PSO017G7250 Papaver somniferum HOM05D005998 ORTHO05D007664 8.1e-56 222.2 210 59.5
PSO017G6639 Papaver somniferum HOM05D005998 ORTHO05D007664 1.4e-55 221.5 164 65.2
PSO017G3521 Papaver somniferum HOM05D005998 ORTHO05D007664 8.7e-50 202.2 461 38.4
PSO541G3130 Papaver somniferum HOM05D005998 ORTHO05D007664 5.6e-49 199.5 478 37.9
PSO675G7594 Papaver somniferum HOM05D005998 ORTHO05D007664 1.3e-48 198.4 406 40.1
PSO675G8174 Papaver somniferum HOM05D005998 ORTHO05D007664 2.3e-42 177.6 437 38.0
PSO017G0196 Papaver somniferum HOM05D005998 ORTHO05D007664 5.1e-42 176.4 419 37.5
PSO218G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 9.6e-41 172.2 213 46.5
PSO675G6053 Papaver somniferum HOM05D005998 ORTHO05D007664 1.6e-40 171.4 213 46.5
PSO017G5443 Papaver somniferum HOM05D005998 ORTHO05D007664 5.3e-39 166.4 230 43.9
PSO340G0001 Papaver somniferum HOM05D005998 ORTHO05D007664 2.5e-36 157.5 171 48.5
PSO675G6885 Papaver somniferum HOM05D005998 ORTHO05D007664 2.5e-36 157.5 171 48.5
PSO017G0278 Papaver somniferum HOM05D000500 ORTHO05D007664 2.7e-35 154.1 107 70.1
PSO170G1012 Papaver somniferum HOM05D005998 ORTHO05D007664 4.8e-32 143.3 461 36.0
PSO837G0015 Papaver somniferum HOM05D005998 ORTHO05D007664 4.8e-32 143.3 400 36.5
PSO837G0060 Papaver somniferum HOM05D005998 ORTHO05D007664 6.3e-32 142.9 430 35.3
PSO017G7049 Papaver somniferum HOM05D005998 ORTHO05D007664 2.4e-31 141.0 220 42.7
PSO017G2859 Papaver somniferum HOM05D005998 ORTHO05D007664 3.2e-28 130.6 163 46.6
PSO573G0021 Papaver somniferum HOM05D005998 ORTHO05D007664 3.7e-24 117.1 407 32.2
ECA236G1847 Erigeron canadensis HOM05D005998 ORTHO05D007664 2.4e-23 114.4 429 25.6
HanXRQChr10g0281201 Helianthus annuus HOM05D005998 ORTHO05D007664 6.9e-23 112.8 434 29.0
PSO017G7319 Papaver somniferum HOM05D005998 ORTHO05D007664 6.9e-23 112.8 116 50.0
COL.COLO4_29925 Corchorus olitorius HOM05D005998 ORTHO05D007664 4.5e-22 110.2 168 38.7
PSO541G0922 Papaver somniferum HOM05D005998 ORTHO05D007664 5.9e-22 109.8 117 47.9
Sc05g0001600 Simmondsia chinensis HOM05D005998 ORTHO05D007664 5.0e-21 106.7 420 24.3
Actinidia23131 Actinidia chinensis HOM05D005998 ORTHO05D007664 1.1e-20 105.5 169 36.7
Hma1.2p1_1756F.1_g301020 Hydrangea macrophylla HOM05D005998 ORTHO05D007664 1.9e-20 104.8 168 37.5
PSO675G5104 Papaver somniferum HOM05D005998 ORTHO05D007664 5.5e-20 103.2 325 36.6
Migut.N00691 Erythranthe guttata HOM05D005998 ORTHO05D007664 9.4e-20 102.4 432 29.2
CAN.G181.48 Capsicum annuum HOM05D005998 ORTHO05D007664 1.2e-19 102.1 432 30.6
Gohir.D11G153100 Gossypium hirsutum HOM05D005998 ORTHO05D007664 7.9e-19 99.4 175 37.7
Gorai.007G162000 Gossypium raimondii HOM05D005998 ORTHO05D007664 7.9e-19 99.4 175 37.7
Thecc.01G205300 Theobroma cacao HOM05D005998 ORTHO05D007664 7.9e-19 99.4 168 36.9
Lj2A1109T75 Lonicera japonica HOM05D005998 ORTHO05D007664 1.8e-18 98.2 169 36.7
PGR083G1807 Punica granatum HOM05D005998 ORTHO05D007664 5.1e-18 96.7 171 36.3
Cfa010674 Carpinus fangiana HOM05D005998 ORTHO05D007664 1.1e-17 95.5 134 39.6
Gohir.A11G144800 Gossypium hirsutum HOM05D005998 ORTHO05D007664 3.3e-17 94.0 172 36.6
Prupe.8G184400 Prunus persica HOM05D005998 ORTHO05D007664 1.3e-16 92.0 172 37.8
AT3G07550 Arabidopsis thaliana HOM05D005998 ORTHO05D007664 1.7e-16 91.7 165 37.0
HanXRQChr08g0231291 Helianthus annuus HOM05D005998 ORTHO05D007664 2.2e-16 91.3 177 33.9
HanXRQChr08g0231301 Helianthus annuus HOM05D005998 ORTHO05D007664 2.2e-16 91.3 177 33.9
PSO017G6055 Papaver somniferum HOM05D005998 ORTHO05D007664 3.7e-16 90.5 150 39.3
CSS0043446 Camellia sinensis var. sinensis HOM05D005998 ORTHO05D007664 4.8e-16 90.1 174 36.2
CANSAT25G0419 Cannabis sativa HOM05D005998 ORTHO05D007664 4.8e-16 90.1 170 34.1
QL09p045684 Quercus lobata HOM05D005998 ORTHO05D007664 4.8e-16 90.1 169 34.3
AL3G18890 Arabidopsis lyrata HOM05D005998 ORTHO05D007664 8.2e-16 89.4 165 35.8
PSO017G2023 Papaver somniferum HOM05D005998 ORTHO05D007664 1.1e-15 89.0 142 38.0
Ciclev10015543m.g Citrus clementina HOM05D005998 ORTHO05D007664 3.1e-15 87.4 172 34.9
PSO573G0007 Papaver somniferum HOM05D005998 ORTHO05D007664 4.1e-15 87.0 150 38.7
PSO573G0042 Papaver somniferum HOM05D005998 ORTHO05D007664 5.3e-15 86.7 423 30.5
Solyc06g007680.1 Solanum lycopersicum HOM05D005998 ORTHO05D007664 7.0e-15 86.3 167 32.3
Nn1g09548 Nelumbo nucifera HOM05D005998 ORTHO05D007664 9.1e-15 85.9 142 38.0
PSO017G5922 Papaver somniferum HOM05D005998 ORTHO05D007664 1.2e-14 85.5 82 50.0
Peaxi162Scf00372g00061 Petunia axillaris HOM05D005998 ORTHO05D007664 1.2e-14 85.5 168 32.7
Sopen06g002580 Solanum pennellii HOM05D005998 ORTHO05D007664 1.6e-14 85.1 167 32.3
PGSC0003DMG400020641 Solanum tuberosum HOM05D005998 ORTHO05D007664 2.0e-14 84.7 167 32.3
Atru.chr6.3489 Acer truncatum HOM05D005998 ORTHO05D007664 2.6e-14 84.3 172 33.1
Sp3g06470 Schrenkiella parvula HOM05D005998 ORTHO05D007664 3.5e-14 84.0 169 35.5
BraA05t22797Z Brassica rapa HOM05D005998 ORTHO05D007664 4.5e-14 83.6 172 35.5
Os11g0264200 Oryza sativa ssp. japonica HOM05D005998 ORTHO05D007664 4.5e-14 83.6 126 34.9
CARHR082230 Cardamine hirsuta HOM05D005998 ORTHO05D007664 5.9e-14 83.2 165 34.5
Thhalv10020882m.g Eutrema salsugineum HOM05D005998 ORTHO05D007664 5.9e-14 83.2 169 34.9
HanXRQChr08g0231281 Helianthus annuus HOM05D005998 ORTHO05D007664 5.9e-14 83.2 166 32.5
BcaC05g29548 Brassica carinata HOM05D005998 ORTHO05D007664 7.7e-14 82.8 169 35.5
Manes.13G057500 Manihot esculenta HOM05D005998 ORTHO05D007664 7.7e-14 82.8 143 38.5
Nitab4.5_0003952g0080 Nicotiana tabacum HOM05D005998 ORTHO05D007664 1.0e-13 82.4 167 31.7
PSO573G0016 Papaver somniferum HOM05D005998 ORTHO05D007664 1.0e-13 82.4 286 32.2
Nitab4.5_0002641g0010 Nicotiana tabacum HOM05D005998 ORTHO05D007664 2.2e-13 81.3 168 32.1
TAR362G0769 Trochodendron aralioides HOM05D005998 ORTHO05D007664 2.2e-13 81.3 149 37.6
Cc02_g30680 Coffea canephora HOM05D005998 ORTHO05D007664 6.5e-13 79.7 415 28.7
Carub.0003s0710 Capsella rubella HOM05D005998 ORTHO05D007664 8.5e-13 79.3 165 32.7
Aa31LG5G18090 Aethionema arabicum HOM05D005998 ORTHO05D007664 1.5e-12 78.6 173 35.3
A05p40660 Brassica napus HOM05D005998 ORTHO05D007664 1.5e-12 78.6 174 34.5
Lsat_1_v5_gn_8_98580 Lactuca sativa HOM05D005998 ORTHO05D007664 4.2e-12 77.0 132 34.8
SEGI_17775 Sequoiadendron giganteum HOM05D005998 ORTHO05D007664 5.5e-12 76.6 167 32.3
ECA247G3308 Erigeron canadensis HOM05D005998 ORTHO05D007664 9.4e-12 75.9 166 31.3
MD05G1151800 Malus domestica HOM05D005998 ORTHO05D007664 9.4e-12 75.9 168 32.1
RcHm_v2.0_Chr6g0281791 Rosa chinensis HOM05D005998 ORTHO05D007664 2.1e-11 74.7 167 31.7
ECA247G2512 Erigeron canadensis HOM05D005998 ORTHO05D007664 2.7e-11 74.3 176 34.1
Potri.017G056400 Populus trichocarpa HOM05D005998 ORTHO05D007664 2.7e-11 74.3 169 32.5
TWI75G0247 Tripterygium wilfordii HOM05D005998 ORTHO05D007664 2.7e-11 74.3 115 36.5
Cpa.g.sc8.24 Carica papaya HOM05D005998 ORTHO05D007664 3.6e-11 73.9 194 31.4
Eucgr.H00683 Eucalyptus grandis HOM05D005998 ORTHO05D007664 3.6e-11 73.9 169 32.5
Lsat_1_v5_gn_4_46380 Lactuca sativa HOM05D005998 ORTHO05D007664 6.1e-11 73.2 117 36.8
AUR62028626 Chenopodium quinoa HOM05D005998 ORTHO05D007664 1.4e-10 72.0 187 29.9
PSO573G0035 Papaver somniferum HOM05D005998 ORTHO05D007664 2.3e-10 71.2 200 30.0
HPP92_024394 Vanilla planifolia HOM05D005998 ORTHO05D007664 2.3e-10 71.2 428 29.7
Rhsim13G0055600 Rhododendron simsii HOM05D005998 ORTHO05D007664 3.0e-10 70.9 95 40.0
PSO837G0002 Papaver somniferum HOM05D005998 ORTHO05D007664 5.2e-10 70.1 88 46.6
ECA247G1983 Erigeron canadensis HOM05D005998 ORTHO05D007664 6.7e-10 69.7 180 33.3
Lj3g0009731 Lotus japonicus HOM05D005998 ORTHO05D007664 6.7e-10 69.7 97 42.3
Sabra17G0050000 Salix brachista HOM05D005998 ORTHO05D007664 8.8e-10 69.3 169 30.2
TPR.G5126 Trifolium pratense HOM05D005998 ORTHO05D007664 1.1e-09 68.9 100 40.0
Glyma.07G060100 Glycine max HOM05D005998 ORTHO05D007664 1.5e-09 68.6 95 42.1
Haze_03601 Corylus avellana HOM05D005998 ORTHO05D007664 2.0e-09 68.2 174 29.3
Zm00001eb182340 Zea mays HOM05D005998 ORTHO05D015715 2.6e-09 67.8 132 30.3
Psat4g158400 Pisum sativum HOM05D005998 ORTHO05D007664 7.5e-09 66.2 100 39.0
BcaC05g29549 Brassica carinata HOM05D005998 ORTHO05D007664 9.7e-09 65.9 141 34.8
C05p59770 Brassica napus HOM05D005998 ORTHO05D007664 9.7e-09 65.9 141 34.8
BolC5t34631H Brassica oleracea HOM05D005998 ORTHO05D007664 9.7e-09 65.9 141 34.8
PSO017G3446 Papaver somniferum HOM05D005998 ORTHO05D007664 1.3e-08 65.5 109 38.5
Ca_23566_v3 Cicer arietinum L. HOM05D005998 ORTHO05D007664 2.2e-08 64.7 97 38.1
Medtr8g028140 Medicago truncatula HOM05D005998 ORTHO05D007664 2.2e-08 64.7 91 37.4
ATR0743G036 Amborella trichopoda HOM05D005998 ORTHO05D007664 2.4e-07 61.2 141 27.7
Dinv28780 Davidia involucrata HOM05D005998 ORTHO05D003775 4.1e-07 60.5 107 33.6
Zm00001eb112540 Zea mays HOM05D005998 ORTHO05D007664 5.3e-07 60.1 110 34.5
FvH4_2g17281 Fragaria vesca HOM05D005998 ORTHO05D007664 7.0e-07 59.7 169 30.2
DCAR_000509 Daucus carota HOM05D005998 ORTHO05D007664 9.1e-07 59.3 105 33.3
Zm00001eb048880 Zea mays HOM05D005998 ORTHO05D015715 9.1e-07 59.3 113 32.7
RcHm_v2.0_Chr7g0205731 Rosa chinensis HOM05D005998 ORTHO05D007664 3.5e-06 57.4 102 34.3


User provided reference genes

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