Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G0187 Papaver somniferum HOM05D006671 ORTHO05D008637 0.0e+00 1084.3 536 100.0
PSO170G0973 Papaver somniferum HOM05D006671 ORTHO05D008637 1.5e-242 842.8 488 86.3
TAR623G0926 Trochodendron aralioides HOM05D006671 ORTHO05D008637 2.5e-186 656.0 540 63.7
Aqoxy2G04033 Aquilegia oxysepala HOM05D006671 ORTHO05D008637 3.6e-185 652.1 537 62.4
CSS0038482 Camellia sinensis var. sinensis HOM05D006671 ORTHO05D008637 1.8e-184 649.8 539 63.5
Atru.chr1.4182 Acer truncatum HOM05D006671 ORTHO05D008637 1.9e-181 639.8 534 62.4
Nn8g41287 Nelumbo nucifera HOM05D006671 ORTHO05D008637 1.1e-178 630.6 539 60.1
COL.COLO4_26801 Corchorus olitorius HOM05D006671 ORTHO05D008637 3.6e-177 625.5 539 60.5
Thecc.06G048900 Theobroma cacao HOM05D006671 ORTHO05D008637 1.1e-176 624.0 539 60.9
vmacro18708 Vaccinium macrocarpon HOM05D006671 ORTHO05D008637 3.1e-176 622.5 541 59.9
Rhsim08G0246200 Rhododendron simsii HOM05D006671 ORTHO05D008637 1.2e-175 620.5 553 58.8
Ciclev10025368m.g Citrus clementina HOM05D006671 ORTHO05D008637 1.3e-174 617.1 534 59.9
CiPaw.03G010100 Carya illinoinensis HOM05D006671 ORTHO05D008637 6.4e-174 614.8 550 60.2
Duzib160G0342 Durio zibethinus HOM05D006671 ORTHO05D008637 1.1e-173 614.0 540 59.3
Prupe.3G029600 Prunus persica HOM05D006671 ORTHO05D008637 2.5e-170 602.8 538 58.6
Manes.11G010600 Manihot esculenta HOM05D006671 ORTHO05D008637 4.3e-170 602.1 543 59.1
Potri.001G161100 Populus trichocarpa HOM05D006671 ORTHO05D008637 2.8e-169 599.4 538 58.6
Sc12g0010960 Simmondsia chinensis HOM05D006671 ORTHO05D008637 3.6e-169 599.0 540 57.2
Gohir.D13G119900 Gossypium hirsutum HOM05D006671 ORTHO05D008637 2.4e-168 596.3 541 58.4
MD09G1171100 Malus domestica HOM05D006671 ORTHO05D008637 2.4e-168 596.3 540 58.3
TWI59G0357 Tripterygium wilfordii HOM05D006671 ORTHO05D008637 3.1e-168 595.9 541 58.4
CANSAT56G3116 Cannabis sativa HOM05D006671 ORTHO05D008637 4.0e-168 595.5 549 56.5
Gorai.013G134300 Gossypium raimondii HOM05D006671 ORTHO05D008637 2.6e-167 592.8 545 58.0
ECA234G0268 Erigeron canadensis HOM05D006671 ORTHO05D008637 2.9e-166 589.3 537 57.2
Cc04_g00530 Coffea canephora HOM05D006671 ORTHO05D008637 4.9e-166 588.6 537 56.6
Lalb_Chr10g0101031 Lupinus albus HOM05D006671 ORTHO05D008637 6.4e-166 588.2 547 56.1
TPR.G26443 Trifolium pratense HOM05D006671 ORTHO05D008637 1.1e-165 587.4 542 57.2
Sopen12g024210 Solanum pennellii HOM05D006671 ORTHO05D008637 5.5e-165 585.1 538 56.7
Aa31LG10G1550 Aethionema arabicum HOM05D006671 ORTHO05D008637 7.1e-165 584.7 537 55.9
PGSC0003DMG402028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 1.2e-164 583.9 538 57.4
Phvul.010G121800 Phaseolus vulgaris HOM05D006671 ORTHO05D008637 1.6e-164 583.6 546 56.0
Glyma.16G015100 Glycine max HOM05D006671 ORTHO05D008637 2.1e-164 583.2 550 55.8
SalBow7G2314 Salvia bowleyana HOM05D006671 ORTHO05D008637 1.0e-163 580.9 538 55.6
Migut.D00903 Erythranthe guttata HOM05D006671 ORTHO05D008637 1.3e-163 580.5 537 54.2
Solyc12g055740.2 Solanum lycopersicum HOM05D006671 ORTHO05D008637 1.3e-163 580.5 538 56.5
RcHm_v2.0_Chr2g0148251 Rosa chinensis HOM05D006671 ORTHO05D008637 1.8e-163 580.1 541 59.3
Glyma.07G047100 Glycine max HOM05D006671 ORTHO05D008637 2.3e-163 579.7 544 56.8
Thhalv10011378m.g Eutrema salsugineum HOM05D006671 ORTHO05D008637 3.9e-163 578.9 536 55.4
Eucgr.I02172 Eucalyptus grandis HOM05D006671 ORTHO05D008637 8.7e-163 577.8 538 55.4
CAN.G390.42 Capsicum annuum HOM05D006671 ORTHO05D008637 3.3e-162 575.9 536 55.6
Lj3g0013980 Lotus japonicus HOM05D006671 ORTHO05D008637 4.3e-162 575.5 555 55.9
HanXRQChr10g0311581 Helianthus annuus HOM05D006671 ORTHO05D008637 7.4e-162 574.7 534 56.0
Sp1g40250 Schrenkiella parvula HOM05D006671 ORTHO05D008637 9.6e-162 574.3 536 54.9
Medtr8g023620 Medicago truncatula HOM05D006671 ORTHO05D008637 1.6e-161 573.5 543 55.8
MSTRG.9549 Avicennia marina HOM05D006671 ORTHO05D008637 3.7e-161 572.4 535 56.3
AT1G53710 Arabidopsis thaliana HOM05D006671 ORTHO05D008637 8.1e-161 571.2 535 54.4
CARHR044010 Cardamine hirsuta HOM05D006671 ORTHO05D008637 8.1e-161 571.2 535 54.0
Psat4g165440 Pisum sativum HOM05D006671 ORTHO05D008637 5.3e-160 568.5 542 55.4
BcaC01g01410 Brassica carinata HOM05D006671 ORTHO05D008637 9.0e-160 567.8 534 55.2
Lj5C27T5 Lonicera japonica HOM05D006671 ORTHO05D008637 2.0e-159 566.6 494 59.5
HPP92_002242 Vanilla planifolia HOM05D006671 ORTHO05D008637 2.6e-159 566.2 535 56.4
C03p91740 Brassica napus HOM05D006671 ORTHO05D008637 3.4e-159 565.8 534 55.1
FvH4_6g36250 Fragaria vesca HOM05D006671 ORTHO05D008637 3.4e-159 565.8 538 56.5
Actinidia24409 Actinidia chinensis HOM05D006671 ORTHO05D008637 5.8e-159 565.1 500 59.2
Carub.0001s4299 Capsella rubella HOM05D006671 ORTHO05D008637 5.8e-159 565.1 536 54.1
Haze_14039 Corylus avellana HOM05D006671 ORTHO05D008637 1.0e-158 564.3 649 51.6
BraA08t32194Z Brassica rapa HOM05D006671 ORTHO05D008637 2.2e-158 563.1 536 54.3
FAN14G1234 Fragaria x ananassa HOM05D006671 ORTHO05D008637 2.9e-158 562.8 538 56.3
A08p01430 Brassica napus HOM05D006671 ORTHO05D008637 3.8e-158 562.4 536 54.5
BolC3t21495H Brassica oleracea HOM05D006671 ORTHO05D008637 4.9e-158 562.0 536 54.1
MBI13_g05970_MAGBIO Magnolia biondii HOM05D006671 ORTHO05D008637 6.5e-158 561.6 489 60.9
BcaB04g17063 Brassica carinata HOM05D006671 ORTHO05D008637 8.4e-158 561.2 536 54.3
PGSC0003DMG401028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 8.4e-158 561.2 538 55.6
AL1G62410 Arabidopsis lyrata HOM05D006671 ORTHO05D008637 1.1e-157 560.8 539 53.6
arahy.Tifrunner.gnm1.ann1.NMV212 Arachis hypogaea HOM05D006671 ORTHO05D008637 2.5e-157 559.7 541 54.7
Os03g0397300 Oryza sativa ssp. japonica HOM05D006671 ORTHO05D008637 4.6e-156 555.4 536 54.9
PGR119G0898 Punica granatum HOM05D006671 ORTHO05D008637 6.0e-156 555.1 546 54.6
arahy.Tifrunner.gnm1.ann1.YS0GDU Arachis hypogaea HOM05D006671 ORTHO05D008637 1.0e-155 554.3 541 54.2
DCAR_007665 Daucus carota HOM05D006671 ORTHO05D008637 2.3e-155 553.1 557 53.3
Cpa.g.sc229.10 Carica papaya HOM05D006671 ORTHO05D008637 5.1e-155 552.0 538 55.8
Sabra01G0131200 Salix brachista HOM05D006671 ORTHO05D008637 1.9e-154 550.1 584 52.4
Zm00001eb392730 Zea mays HOM05D006671 ORTHO05D008637 2.1e-153 546.6 539 54.4
EL10Ac7g18235 Beta vulgaris HOM05D006671 ORTHO05D008637 3.7e-153 545.8 539 54.7
SGA_v2.0_scaffold4G02101 Striga asiatica HOM05D006671 ORTHO05D008637 1.4e-152 543.9 542 53.9
FAN09G2187 Fragaria x ananassa HOM05D006671 ORTHO05D008637 2.9e-150 536.2 539 55.1
Lsat_1_v5_gn_5_137600 Lactuca sativa HOM05D006671 ORTHO05D008637 8.5e-150 534.6 530 55.5
CDE06G0010 Ceratophyllum demersum HOM05D006671 ORTHO05D008637 1.3e-147 527.3 477 57.2
GSVIVG01026409001 Vitis vinifera HOM05D006671 ORTHO05D008637 1.8e-147 526.9 761 41.9
FAN14G2634 Fragaria x ananassa HOM05D006671 ORTHO05D008637 3.4e-143 512.7 538 53.9
SEGI_35568 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 3.9e-139 499.2 436 57.1
AUR62001377 Chenopodium quinoa HOM05D006671 ORTHO05D008637 2.0e-138 496.9 489 53.8
unitig_699.g19656 Utricularia gibba HOM05D006671 ORTHO05D001254 1.4e-136 490.7 543 49.5
Dinv20369 Davidia involucrata HOM05D006671 ORTHO05D008637 1.5e-135 487.3 364 65.4
AUR62044064 Chenopodium quinoa HOM05D006671 ORTHO05D008637 1.3e-134 484.2 476 53.2
Ah.08g217540 Amaranthus hybridus HOM05D006671 ORTHO05D008637 3.8e-134 482.6 537 50.1
Actinidia33812 Actinidia chinensis HOM05D006671 ORTHO05D008637 7.2e-133 478.4 524 51.3
Nitab4.5_0000357g0220 Nicotiana tabacum HOM05D006671 ORTHO05D008637 3.5e-127 459.5 534 49.3
Nitab4.5_0003469g0010 Nicotiana tabacum HOM05D006671 ORTHO05D008637 4.0e-123 446.0 545 47.3
SMO347G0345 Selaginella moellendorffii HOM05D006671 ORTHO05D008637 5.5e-117 425.6 539 43.2
Pp3c21_8010 Physcomitrium patens HOM05D006671 ORTHO05D008637 6.8e-115 418.7 532 43.4
AagrBONN_evm.TU.Sc2ySwM_362.1979 Anthoceros agrestis HOM05D006671 ORTHO05D008637 9.1e-112 408.3 539 43.0
Peaxi162Scf00177g00616 Petunia axillaris HOM05D006671 ORTHO05D008637 7.5e-106 388.7 534 43.8
VMungo0331G0057 Vigna mungo HOM05D006671 ORTHO05D008637 8.6e-102 375.2 298 60.7
Ca_23471_v3 Cicer arietinum L. HOM05D006671 ORTHO05D008637 1.7e-97 360.9 472 45.6
Hma1.2p1_1104F.1_g257490 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 2.2e-97 360.5 256 67.2
QL03p047059 Quercus lobata HOM05D006671 ORTHO05D008637 6.6e-94 349.0 263 64.3
THA.LOC104822767 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 1.2e-90 338.2 358 52.0
Mapoly0048s0109 Marchantia polymorpha HOM05D006671 ORTHO05D008637 2.2e-81 307.4 543 35.5
QL03p047068 Quercus lobata HOM05D006671 ORTHO05D008637 1.7e-70 271.2 285 56.1
BcaNung02916 Brassica carinata HOM05D006671 ORTHO05D008637 3.9e-70 270.0 504 35.5
Hma1.2p1_1104F.1_g257500 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 2.5e-69 267.3 273 54.9
FAN02G1271 Fragaria x ananassa HOM05D006671 ORTHO05D008637 3.1e-67 260.4 313 49.8
Gohir.A13G116750 Gossypium hirsutum HOM05D006671 ORTHO05D008637 5.2e-67 259.6 202 60.9
Oeu006761.2 Olea europaea HOM05D006671 ORTHO05D008637 1.2e-63 248.4 284 49.6
THA.LOC104803433 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 1.7e-62 244.6 180 66.7
ATR0006G018 Amborella trichopoda HOM05D006671 ORTHO05D008637 2.3e-62 244.2 275 49.8
SEGI_04788 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 6.6e-62 242.7 268 50.4
Gohir.A13G116801 Gossypium hirsutum HOM05D006671 ORTHO05D008637 4.8e-60 236.5 255 54.9
MD17G1156100 Malus domestica HOM05D006671 ORTHO05D008637 1.0e-54 218.8 444 37.2
MCO09G741 Micromonas commoda HOM05D006671 ORTHO05D008637 7.4e-45 186.0 422 32.5
Actinidia21851 Actinidia chinensis HOM05D006671 ORTHO05D008637 3.1e-43 180.6 195 51.8
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 1.6e-39 168.3 281 40.6
Hund05690 Selenicereus undatus HOM05D006671 ORTHO05D008637 1.3e-36 158.7 123 65.9
Actinidia21852 Actinidia chinensis HOM05D006671 ORTHO05D008637 1.1e-32 145.6 120 60.0
Cfa022026 Carpinus fangiana HOM05D002393 ORTHO05D123579 2.9e-25 120.9 480 26.0
Lsat_1_v5_gn_2_122021 Lactuca sativa HOM05D006671 ORTHO05D008637 6.9e-19 99.8 129 47.3
FAN05G4676 Fragaria x ananassa HOM05D006671 ORTHO05D008637 1.3e-17 95.5 115 53.0
BcaC09g48416 Brassica carinata HOM05D006671 ORTHO05D027459 4.8e-12 77.0 83 49.4
C01p50010 Brassica napus HOM05D010519 ORTHO05D027459 4.8e-12 77.0 83 49.4
BolC1t04958H Brassica oleracea HOM05D010519 ORTHO05D027459 4.8e-12 77.0 83 49.4
Lsat_1_v5_gn_0_9700 Lactuca sativa HOM05D008167 ORTHO05D010296 1.4e-11 75.5 382 23.0
Lsat_1_v5_gn_1_119700 Lactuca sativa HOM05D006671 ORTHO05D011576 5.9e-10 70.1 181 31.5
Lsat_1_v5_gn_2_91241 Lactuca sativa HOM05D006671 ORTHO05D011576 7.7e-10 69.7 181 32.0
AUR62027724 Chenopodium quinoa HOM05D008167 ORTHO05D010296 2.2e-09 68.2 330 21.5
arahy.Tifrunner.gnm1.ann1.R32LA5 Arachis hypogaea HOM05D008167 ORTHO05D010296 5.0e-09 67.0 406 23.4
TAR628G0982 Trochodendron aralioides HOM05D008167 ORTHO05D010296 6.5e-09 66.6 350 21.7
Manes.02G154800 Manihot esculenta HOM05D008167 ORTHO05D010296 3.2e-08 64.3 335 22.7
Potri.002G093800 Populus trichocarpa HOM05D008167 ORTHO05D010296 3.2e-08 64.3 333 21.9
TPR.G32489 Trifolium pratense HOM05D008167 ORTHO05D010296 3.2e-08 64.3 306 24.5
QL12p036142 Quercus lobata HOM05D008167 ORTHO05D010296 5.5e-08 63.5 402 22.4
Nn1g05299 Nelumbo nucifera HOM05D008167 ORTHO05D010296 7.2e-08 63.2 345 22.0
EL10Ac1g01257 Beta vulgaris HOM05D008167 ORTHO05D010296 1.6e-07 62.0 336 21.1
Actinidia10306 Actinidia chinensis HOM05D008167 ORTHO05D010296 6.1e-07 60.1 351 23.9
Dinv13035 Davidia involucrata HOM05D008167 ORTHO05D010296 6.1e-07 60.1 334 20.4
PSO133G0102 Papaver somniferum HOM05D008167 ORTHO05D010296 6.1e-07 60.1 364 20.6
Prupe.1G513100 Prunus persica HOM05D008167 ORTHO05D010296 6.1e-07 60.1 383 21.4
Thecc.08G110600 Theobroma cacao HOM05D008167 ORTHO05D010296 1.0e-06 59.3 338 22.5
HanXRQChr04g0111501 Helianthus annuus HOM05D008167 ORTHO05D010296 1.8e-06 58.5 187 25.7
PSO541G2703 Papaver somniferum HOM05D008167 ORTHO05D010296 2.3e-06 58.2 368 21.7
RcHm_v2.0_Chr7g0239831 Rosa chinensis HOM05D008167 ORTHO05D010296 2.3e-06 58.2 380 22.1
Os06g0222800 Oryza sativa ssp. japonica HOM05D008167 ORTHO05D010296 4.0e-06 57.4 397 21.4
arahy.Tifrunner.gnm1.ann1.DD9M5F Arachis hypogaea HOM05D008167 ORTHO05D010296 5.2e-06 57.0 263 24.0
Lj3g0012000 Lotus japonicus HOM05D008167 ORTHO05D010296 8.8e-06 56.2 205 25.4


User provided reference genes

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