Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 7.8e-261 904.0 789 100.0
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 6.0e-237 824.7 789 88.8
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 5.2e-79 300.1 764 46.7
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.2e-70 272.3 764 48.0
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 1.0e-66 259.2 774 43.8
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 3.8e-66 257.3 764 44.9
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.2e-61 241.5 765 45.6
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 8.3e-61 239.6 779 44.8
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 2.3e-58 231.5 747 42.7
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 2.5e-57 228.0 764 52.1
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 9.5e-57 226.1 775 49.5
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 4.7e-56 223.8 784 38.6
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 6.1e-56 223.4 514 53.1
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 4.0e-55 220.7 778 43.2
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 6.8e-55 219.9 765 45.8
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 1.3e-53 215.7 765 47.7
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 2.2e-53 214.9 747 44.6
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 1.8e-52 211.8 749 46.9
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 7.8e-51 206.5 753 40.2
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 1.0e-50 206.1 778 45.0
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 9.5e-49 199.5 776 44.5
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 4.7e-48 197.2 784 42.6
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 6.1e-48 196.8 785 45.5
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 1.5e-46 192.2 536 37.3
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 1.3e-45 189.1 782 41.6
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 6.4e-45 186.8 778 42.5
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 4.1e-44 184.1 742 39.5
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 4.1e-44 184.1 782 45.4
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 6.0e-43 180.3 500 42.8
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 6.0e-43 180.3 500 42.8
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 2.3e-42 178.3 742 38.1
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 1.5e-41 175.6 777 46.1
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 1.5e-41 175.6 741 40.8
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 1.2e-40 172.6 496 38.3
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 2.8e-40 171.4 734 49.5
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 8.0e-40 169.9 754 41.4
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 1.1e-39 169.5 782 47.6
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 2.3e-39 168.3 781 48.4
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 5.2e-39 167.2 512 40.0
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 8.9e-39 166.4 487 42.7
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 8.9e-39 166.4 753 43.0
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 2.0e-38 165.2 744 46.1
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 5.8e-38 163.7 506 40.5
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 7.5e-38 163.3 505 41.6
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 1.7e-37 162.2 780 43.3
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 6.4e-37 160.2 498 39.6
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 6.4e-37 160.2 774 41.1
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 1.4e-36 159.1 526 37.5
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 9.2e-36 156.4 776 39.7
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 3.5e-35 154.5 754 45.8
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 3.5e-35 154.5 742 47.4
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 4.6e-35 154.1 468 41.9
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 2.3e-34 151.8 500 39.0
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 3.0e-34 151.4 752 38.6
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 5.1e-34 150.6 467 38.8
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 1.5e-33 149.1 511 41.5
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 1.9e-33 148.7 766 36.4
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 1.9e-33 148.7 492 45.7
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 3.3e-33 147.9 783 42.5
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 1.2e-32 146.0 511 38.0
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 2.1e-32 145.2 770 42.5
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 2.1e-32 145.2 256 41.4
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 4.7e-32 144.1 476 35.1
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 8.1e-32 143.3 753 42.9
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 2.3e-31 141.7 738 40.1
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 1.5e-30 139.0 780 49.2
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 6.4e-29 133.7 516 45.0
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 1.4e-28 132.5 764 41.9
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 1.3e-26 125.9 553 37.6
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 2.3e-26 125.2 521 36.3
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 2.3e-26 125.2 511 41.1
BraA10t43273Z Brassica rapa HOM05D006421 ORTHO05D008268 3.0e-26 124.8 214 39.7
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 3.0e-26 124.8 489 35.6
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 6.6e-26 123.6 490 39.0
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 8.6e-26 123.2 420 36.9
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 1.2e-24 119.4 738 45.1
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 2.8e-24 118.2 485 36.5
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 4.7e-24 117.5 516 41.1
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 3.1e-23 114.8 415 47.2
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 4.0e-23 114.4 382 41.1
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 1.2e-22 112.8 559 32.6
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 3.4e-22 111.3 379 46.2
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 7.6e-22 110.2 461 34.5
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 3.8e-21 107.8 379 46.7
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 4.9e-21 107.5 796 39.2
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 4.2e-20 104.4 366 41.3
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 2.7e-19 101.7 519 36.4
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 3.5e-19 101.3 753 37.7
TAR636G0610 Trochodendron aralioides HOM05D006421 ORTHO05D008268 7.8e-19 100.1 123 48.0
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 2.3e-18 98.6 275 30.5
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 3.0e-18 98.2 419 44.6
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 1.9e-17 95.5 346 43.4
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 1.9e-17 95.5 784 39.8
unitig_748.g8080 Utricularia gibba HOM05D006421 ORTHO05D008268 7.3e-17 93.6 719 46.2
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 9.6e-17 93.2 492 32.9
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 3.6e-16 91.3 792 44.3
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 5.3e-15 87.4 738 38.9
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 9.9e-14 83.2 208 43.3
Zm00001eb206500 Zea mays HOM05D006421 ORTHO05D008268 2.9e-13 81.6 491 37.7
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 1.1e-12 79.7 265 32.8
Potri.018G026300 Populus trichocarpa HOM05D006421 ORTHO05D008268 2.4e-12 78.6 96 47.9
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 3.5e-11 74.7 119 39.5
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 4.6e-11 74.3 238 33.2
SEGI_28581 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 6.0e-11 73.9 537 34.3
FAN15G2294 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.3e-10 72.0 323 25.4
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 3.9e-10 71.2 233 28.3
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 1.5e-09 69.3 754 40.1
FAN15G3111 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.1e-07 63.2 72 50.0


User provided reference genes

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