Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO013G0364 Papaver somniferum HOM05D005960 ORTHO05D007537 1.1e-262 909.4 447 100.0
PSO421G0059 Papaver somniferum HOM05D005960 ORTHO05D007537 1.7e-252 875.5 447 96.4
TAR371G0518 Trochodendron aralioides HOM05D005960 ORTHO05D007537 5.3e-214 747.7 450 82.7
FvH4_6g47510 Fragaria vesca HOM05D005960 ORTHO05D007537 7.9e-210 733.8 456 80.5
GSVIVG01011490001 Vitis vinifera HOM05D005960 ORTHO05D007537 1.0e-209 733.4 455 80.4
Aqoxy3G00406 Aquilegia oxysepala HOM05D005960 ORTHO05D007537 3.0e-209 731.9 451 80.0
Actinidia01975 Actinidia chinensis HOM05D005960 ORTHO05D007537 5.1e-209 731.1 461 80.0
FAN05G2671 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.5e-208 729.6 456 80.0
TWI60G0302 Tripterygium wilfordii HOM05D005960 ORTHO05D007537 1.9e-208 729.2 451 79.8
Atru.chr8.386 Acer truncatum HOM05D005960 ORTHO05D007537 2.5e-208 728.8 456 80.3
Cfa007624 Carpinus fangiana HOM05D005960 ORTHO05D007537 3.1e-206 721.8 456 79.4
Hma1.2p1_3044F.1_g332080 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 3.1e-206 721.8 454 80.2
CiPaw.04G058500 Carya illinoinensis HOM05D005960 ORTHO05D007537 9.1e-206 720.3 453 79.2
Eucgr.I01985 Eucalyptus grandis HOM05D005960 ORTHO05D007537 9.1e-206 720.3 455 79.3
MD17G1056600 Malus domestica HOM05D005960 ORTHO05D007537 9.1e-206 720.3 454 78.6
RcHm_v2.0_Chr2g0166541 Rosa chinensis HOM05D005960 ORTHO05D007537 1.2e-205 719.9 458 79.3
Cpa.g.sc14.144 Carica papaya HOM05D005960 ORTHO05D007537 5.9e-205 717.6 453 78.8
CsaV3_5G038400 Cucumis sativus L. HOM05D005960 ORTHO05D007537 1.7e-204 716.1 454 79.1
MBI16_g15532_MAGBIO Magnolia biondii HOM05D005960 ORTHO05D007537 1.7e-204 716.1 451 79.6
Potri.017G090100 Populus trichocarpa HOM05D005960 ORTHO05D007537 2.9e-204 715.3 457 77.7
vmacro05665 Vaccinium macrocarpon HOM05D005960 ORTHO05D007537 3.8e-204 714.9 455 79.6
CANSAT64G2728 Cannabis sativa HOM05D005960 ORTHO05D007537 8.5e-204 713.8 454 79.3
EL10Ac2g03055 Beta vulgaris HOM05D005960 ORTHO05D007537 1.1e-203 713.4 454 78.9
MELO3C022021.2 Cucumis melo HOM05D005960 ORTHO05D007537 1.9e-203 712.6 454 78.4
CSS0005506 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 3.2e-203 711.8 457 78.6
CSS0003743 Camellia sinensis var. sinensis HOM05D005960 ORTHO05D007537 4.2e-203 711.4 457 78.3
Ca_04868_v3 Cicer arietinum L. HOM05D005960 ORTHO05D007537 7.2e-203 710.7 448 79.0
Lj2g0023614 Lotus japonicus HOM05D005960 ORTHO05D007537 7.2e-203 710.7 454 78.6
PGR004G2687 Punica granatum HOM05D005960 ORTHO05D007537 7.2e-203 710.7 458 78.6
Ciclev10011697m.g Citrus clementina HOM05D005960 ORTHO05D007537 2.1e-202 709.1 456 78.3
QL02p039477 Quercus lobata HOM05D005960 ORTHO05D007537 2.1e-202 709.1 461 76.6
AUR62042562 Chenopodium quinoa HOM05D005960 ORTHO05D007537 2.7e-202 708.8 457 78.3
Glyma.19G027400 Glycine max HOM05D005960 ORTHO05D007537 4.7e-202 708.0 452 78.1
Manes.01G099100 Manihot esculenta HOM05D005960 ORTHO05D007537 6.1e-202 707.6 455 77.1
Thecc.04G090800 Theobroma cacao HOM05D005960 ORTHO05D007537 1.4e-201 706.4 460 76.3
Migut.H00653 Erythranthe guttata HOM05D005960 ORTHO05D007537 2.3e-201 705.7 458 78.2
HanXRQChr14g0448721 Helianthus annuus HOM05D005960 ORTHO05D007537 2.3e-201 705.7 454 78.0
QL02p039732 Quercus lobata HOM05D005960 ORTHO05D007537 2.3e-201 705.7 461 76.1
Phvul.004G033300 Phaseolus vulgaris HOM05D005960 ORTHO05D007537 3.0e-201 705.3 452 78.1
ClCG11G004630 Citrullus lanatus HOM05D005960 ORTHO05D007537 5.1e-201 704.5 453 78.1
Rhsim10G0047200 Rhododendron simsii HOM05D005960 ORTHO05D007537 5.1e-201 704.5 473 76.1
Duzib147G1008 Durio zibethinus HOM05D005960 ORTHO05D007537 2.0e-200 702.6 458 77.1
Rhsim10G0046600 Rhododendron simsii HOM05D005960 ORTHO05D007537 5.7e-200 701.0 473 75.5
THA.LOC104802965 Tarenaya hassleriana HOM05D005960 ORTHO05D007537 5.7e-200 701.0 452 77.7
TPR.G26197 Trifolium pratense HOM05D005960 ORTHO05D007537 9.7e-200 700.3 453 77.7
Medtr6g013750 Medicago truncatula HOM05D005960 ORTHO05D007537 1.3e-199 699.9 453 77.3
Sed0006667 Sechium edule HOM05D005960 ORTHO05D007537 1.7e-199 699.5 450 78.0
ECA238G1943 Erigeron canadensis HOM05D005960 ORTHO05D007537 4.8e-199 698.0 457 77.0
Oeu000854.1 Olea europaea HOM05D005960 ORTHO05D007537 4.8e-199 698.0 470 75.1
Glyma.13G059000 Glycine max HOM05D005960 ORTHO05D007537 6.3e-199 697.6 452 77.4
Sabra17G0079200 Salix brachista HOM05D005960 ORTHO05D007537 1.1e-198 696.8 473 74.6
VMungo0464G0831 Vigna mungo HOM05D005960 ORTHO05D007537 5.3e-198 694.5 452 76.5
COL.COLO4_21375 Corchorus olitorius HOM05D005960 ORTHO05D007537 9.1e-198 693.7 457 76.8
Gohir.A11G071600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 1.0e-196 690.3 461 76.6
Psat1g068640 Pisum sativum HOM05D005960 ORTHO05D007537 1.0e-196 690.3 454 76.2
AT3G01060 Arabidopsis thaliana HOM05D005960 ORTHO05D007537 2.9e-196 688.7 455 74.1
Sp3g01070 Schrenkiella parvula HOM05D005960 ORTHO05D007537 2.9e-196 688.7 447 75.2
arahy.Tifrunner.gnm1.ann1.8N3EDT Arachis hypogaea HOM05D005960 ORTHO05D007537 3.8e-196 688.3 462 75.5
Gorai.007G081300 Gossypium raimondii HOM05D005960 ORTHO05D007537 5.0e-196 688.0 461 76.4
Haze_14472 Corylus avellana HOM05D005960 ORTHO05D007537 1.1e-195 686.8 519 69.6
Thhalv10020707m.g Eutrema salsugineum HOM05D005960 ORTHO05D007537 1.1e-195 686.8 451 74.9
arahy.Tifrunner.gnm1.ann1.7U9LX7 Arachis hypogaea HOM05D005960 ORTHO05D007537 4.2e-195 684.9 462 75.3
AL3G11200 Arabidopsis lyrata HOM05D005960 ORTHO05D007537 9.4e-195 683.7 451 74.3
Carub.0003s0111 Capsella rubella HOM05D005960 ORTHO05D007537 2.1e-194 682.6 454 74.7
CARHR076010 Cardamine hirsuta HOM05D005960 ORTHO05D007537 3.6e-194 681.8 455 73.8
CAN.G734.6 Capsicum annuum HOM05D005960 ORTHO05D007537 6.1e-194 681.0 459 74.5
BNapus_Darmor_BZH_scaffold_97p00050 Brassica napus HOM05D005960 ORTHO05D007537 5.2e-193 677.9 449 75.9
Solyc03g013240.4 Solanum lycopersicum HOM05D005960 ORTHO05D007537 5.2e-193 677.9 423 78.5
Aa31LG5G12560 Aethionema arabicum HOM05D005960 ORTHO05D007537 8.8e-193 677.2 442 76.2
BolC1t05923H Brassica oleracea HOM05D005960 ORTHO05D007537 8.8e-193 677.2 449 75.7
Sopen03g016610 Solanum pennellii HOM05D005960 ORTHO05D007537 2.0e-192 676.0 382 84.8
BNapus_Darmor_BZH_scaffold_113p00110 Brassica napus HOM05D005960 ORTHO05D007537 1.3e-191 673.3 451 75.2
BraA01t04634Z Brassica rapa HOM05D005960 ORTHO05D007537 3.7e-191 671.8 451 75.2
DCAR_005553 Daucus carota HOM05D005960 ORTHO05D007537 7.0e-190 667.5 403 80.9
ATR0111G015 Amborella trichopoda HOM05D005960 ORTHO05D007537 2.6e-189 665.6 460 73.9
Os05g0512200 Oryza sativa ssp. japonica HOM05D005960 ORTHO05D007537 7.7e-189 664.1 389 82.5
SalBow1G6551 Salvia bowleyana HOM05D005960 ORTHO05D007537 1.7e-188 662.9 463 73.7
Lalb_Chr06g0175111 Lupinus albus HOM05D005960 ORTHO05D007537 3.8e-188 661.8 465 74.2
Nn4g23343 Nelumbo nucifera HOM05D005960 ORTHO05D007537 5.5e-187 657.9 362 87.8
Lsat_1_v5_gn_2_87860 Lactuca sativa HOM05D005960 ORTHO05D007537 9.4e-187 657.1 458 72.9
unitig_736.g22244 Utricularia gibba HOM05D005960 ORTHO05D007537 2.7e-186 655.6 460 71.5
FAN14G4646 Fragaria x ananassa HOM05D005960 ORTHO05D007537 7.5e-184 647.5 456 73.2
Lj4C116G4 Lonicera japonica HOM05D005960 ORTHO05D007537 1.3e-183 646.7 460 72.4
FAN02G1813 Fragaria x ananassa HOM05D005960 ORTHO05D007537 2.4e-182 642.5 356 87.6
Peaxi162Scf00451g00429 Petunia axillaris HOM05D005960 ORTHO05D007537 1.6e-181 639.8 456 72.4
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 1.1e-179 633.6 453 73.3
Nitab4.5_0001637g0110 Nicotiana tabacum HOM05D005960 ORTHO05D007537 6.1e-178 627.9 461 70.3
Sc10g0003290 Simmondsia chinensis HOM05D005960 ORTHO05D007537 2.0e-176 622.9 364 83.0
BcaC09g47681 Brassica carinata HOM05D005960 ORTHO05D007537 3.4e-176 622.1 449 71.0
SEGI_05647 Sequoiadendron giganteum HOM05D005960 ORTHO05D007537 1.2e-170 603.6 396 73.2
Prupe.3G258900 Prunus persica HOM05D005960 ORTHO05D007537 1.3e-167 593.6 332 85.8
Gohir.D11G075600 Gossypium hirsutum HOM05D005960 ORTHO05D007537 7.8e-165 584.3 332 85.2
Pp3c2_13280 Physcomitrium patens HOM05D005960 ORTHO05D007537 1.3e-159 567.0 401 67.6
SMO335G0027 Selaginella moellendorffii HOM05D005960 ORTHO05D007537 3.2e-158 562.4 437 65.9
Mapoly0015s0039 Marchantia polymorpha HOM05D005960 ORTHO05D007537 2.7e-157 559.3 394 68.3
AUR62018147 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.4e-153 547.0 358 77.7
Cc07_g03890 Coffea canephora HOM05D005960 ORTHO05D007537 5.2e-153 545.0 353 76.2
AagrBONN_evm.TU.Sc2ySwM_362.2259 Anthoceros agrestis HOM05D005960 ORTHO05D007537 1.3e-151 540.4 384 66.9
Actinidia01967 Actinidia chinensis HOM05D005960 ORTHO05D007537 2.9e-151 539.3 385 73.0
Nitab4.5_0005196g0010 Nicotiana tabacum HOM05D005960 ORTHO05D007537 1.6e-149 533.5 457 62.8
Zm00001eb292620 Zea mays HOM05D005960 ORTHO05D007537 3.2e-142 509.2 302 80.8
MSTRG.3021 Avicennia marina HOM05D005960 ORTHO05D007537 6.2e-138 495.0 279 85.7
HPP92_018459 Vanilla planifolia HOM05D005960 ORTHO05D007537 1.9e-134 483.4 307 76.2
CBR_g61504 Chara braunii HOM05D005960 ORTHO05D007537 1.2e-133 480.7 407 59.2
CDE04G1831 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 4.2e-126 455.7 405 62.2
Dinv11487 Davidia involucrata HOM05D005960 ORTHO05D007537 2.7e-125 453.0 310 74.5
CDE07G2056 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 1.9e-123 446.8 320 70.6
FAN09G3416 Fragaria x ananassa HOM05D005960 ORTHO05D007537 1.1e-121 441.0 418 58.6
Hma1.2p1_1813F.1_g303790 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.1e-121 441.0 236 87.3
Hma1.2p1_3044F.1_g332082 Hydrangea macrophylla HOM05D005960 ORTHO05D007537 1.1e-121 441.0 236 87.3
TAR627G0454 Trochodendron aralioides HOM05D005960 ORTHO05D007537 1.1e-121 441.0 332 68.7
Cre13.g562750 Chlamydomonas reinhardtii HOM05D005960 ORTHO05D007537 7.6e-112 408.3 412 50.0
MD09G1061300 Malus domestica HOM05D005960 ORTHO05D007537 6.5e-87 325.5 242 69.4
MCO03G230 Micromonas commoda HOM05D005960 ORTHO05D007537 1.5e-75 287.7 318 46.5
MCO05G128 Micromonas commoda HOM05D005960 ORTHO05D007537 1.4e-60 238.0 340 40.9
PRCOL_00002980 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 5.0e-55 219.5 403 35.2
PRCOL_00004151 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 3.0e-52 210.3 405 36.3
CDE07G0145 Ceratophyllum demersum HOM05D005960 ORTHO05D007537 2.4e-49 200.7 117 84.6
PRCOL_00003347 Prasinoderma coloniale HOM05D005960 ORTHO05D007537 7.0e-49 199.1 344 34.0
MCO08G069 Micromonas commoda HOM05D005960 ORTHO05D007537 6.8e-44 182.6 348 33.0
Cc07_g03900 Coffea canephora HOM05D005960 ORTHO05D007537 5.8e-43 179.5 102 81.4
MCO08G121 Micromonas commoda HOM05D005960 ORTHO05D007537 2.4e-41 174.1 362 31.2
AUR62018149 Chenopodium quinoa HOM05D005960 ORTHO05D007537 1.6e-40 171.4 100 83.0
TPR.G22619 Trifolium pratense HOM05D005960 ORTHO05D007537 1.3e-39 168.3 148 60.8
Potri.004G125301 Populus trichocarpa HOM05D005960 ORTHO05D007537 1.2e-37 161.8 156 55.8
EL10Ac2g03064 Beta vulgaris HOM05D005960 ORTHO05D007537 1.5e-35 154.8 92 83.7
Oeu061493.1 Olea europaea HOM05D005960 ORTHO05D007537 4.0e-20 103.6 51 86.3
PGSC0003DMG400033541 Solanum tuberosum HOM05D005960 ORTHO05D007537 6.6e-15 86.3 45 97.8
MD09G1061200 Malus domestica HOM05D005960 ORTHO05D007537 5.8e-11 73.2 89 49.4
MCO08G023 Micromonas commoda HOM05D005960 ORTHO05D270145 3.5e-08 63.9 150 27.3
Zm00001eb030310 Zea mays HOM05D005960 ORTHO05D051632 1.0e-07 62.4 38 81.6
Zm00001eb250570 Zea mays HOM05D005960 ORTHO05D051632 1.7e-07 61.6 42 73.8


User provided reference genes

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