Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO013G0119 Papaver somniferum HOM05D003575 ORTHO05D003587 1.1e-104 383.3 180 100.0
PSO832G1021 Papaver somniferum HOM05D003575 ORTHO05D003587 1.5e-98 362.8 180 94.4
PSO013G0020 Papaver somniferum HOM05D003575 ORTHO05D003587 1.1e-93 346.7 180 90.0
PSO832G3669 Papaver somniferum HOM05D003575 ORTHO05D003587 1.2e-87 326.6 183 85.2
PSO013G0383 Papaver somniferum HOM05D003575 ORTHO05D003587 2.0e-87 325.9 183 85.2
PSO013G0348 Papaver somniferum HOM05D003575 ORTHO05D003587 5.8e-87 324.3 183 84.7
PSO013G0266 Papaver somniferum HOM05D003575 ORTHO05D003587 1.8e-67 259.6 173 71.1
PSO339G1364 Papaver somniferum HOM05D003575 ORTHO05D003587 1.6e-65 253.1 173 68.8
PSO339G4641 Papaver somniferum HOM05D003575 ORTHO05D003587 1.6e-65 253.1 173 68.8
PSO170G1005 Papaver somniferum HOM05D003575 ORTHO05D003587 7.7e-63 244.2 176 65.3
PSO591G0010 Papaver somniferum HOM05D003575 ORTHO05D003587 5.7e-58 228.0 172 60.5
PSO832G1827 Papaver somniferum HOM05D003575 ORTHO05D003587 6.3e-57 224.6 176 61.4
PSO675G6399 Papaver somniferum HOM05D003575 ORTHO05D003587 8.8e-43 177.6 178 49.4
PSO541G2609 Papaver somniferum HOM05D003575 ORTHO05D003587 1.2e-42 177.2 178 50.0
PSO017G4852 Papaver somniferum HOM05D003575 ORTHO05D003587 7.7e-39 164.5 166 50.0
PSO339G3010 Papaver somniferum HOM05D003575 ORTHO05D003587 5.5e-37 158.3 110 64.5
PSO017G1253 Papaver somniferum HOM05D003575 ORTHO05D003587 1.3e-33 147.1 162 45.1
TAR626G1391 Trochodendron aralioides HOM05D003575 ORTHO05D003587 1.1e-32 144.1 169 46.2
Haze_12603 Corylus avellana HOM05D003366 ORTHO05D004045 5.9e-31 138.3 172 40.1
Haze_12614 Corylus avellana HOM05D003366 ORTHO05D004045 1.7e-30 136.7 165 40.6
Hma1.2p1_0599F.1_g187070 Hydrangea macrophylla HOM05D003575 ORTHO05D003587 3.2e-29 132.5 158 43.0
CSS0035464 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 6.1e-28 128.3 168 39.3
Thecc.01G197600 Theobroma cacao HOM05D003575 ORTHO05D003587 2.3e-27 126.3 175 33.1
AUR62029125 Chenopodium quinoa HOM05D003575 ORTHO05D003587 3.0e-27 125.9 164 35.4
Nn1g03152 Nelumbo nucifera HOM05D003575 ORTHO05D003587 4.0e-27 125.6 166 42.8
SHI10168 Sapria himalayana HOM05D003575 ORTHO05D003587 4.0e-27 125.6 179 33.5
RcHm_v2.0_Chr2g0133241 Rosa chinensis HOM05D003575 ORTHO05D003587 8.8e-27 124.4 168 34.5
Manes.12G063604 Manihot esculenta HOM05D003575 ORTHO05D003587 1.5e-26 123.6 167 38.9
Actinidia07857 Actinidia chinensis HOM05D003575 ORTHO05D003587 2.0e-26 123.2 169 38.5
Ah.01g002520 Amaranthus hybridus HOM05D004224 ORTHO05D006437 2.0e-26 123.2 157 36.3
CiPaw.04G197600 Carya illinoinensis HOM05D003575 ORTHO05D003587 2.0e-26 123.2 169 34.9
AUR62035876 Chenopodium quinoa HOM05D003575 ORTHO05D003587 2.0e-26 123.2 164 35.4
DCAR_019672 Daucus carota HOM05D003575 ORTHO05D003587 2.0e-26 123.2 169 36.7
Prupe.3G196400 Prunus persica HOM05D003575 ORTHO05D003587 2.0e-26 123.2 171 35.7
Potri.002G216900 Populus trichocarpa HOM05D003575 ORTHO05D003587 2.6e-26 122.9 167 37.1
AUR62014996 Chenopodium quinoa HOM05D003575 ORTHO05D003587 3.4e-26 122.5 164 36.0
Lalb_Chr14g0362581 Lupinus albus HOM05D003575 ORTHO05D003587 3.4e-26 122.5 172 36.0
Phvul.007G122046 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 3.4e-26 122.5 168 38.1
CDE04G2197 Ceratophyllum demersum HOM05D003575 ORTHO05D003587 4.4e-26 122.1 166 36.7
arahy.Tifrunner.gnm1.ann1.04VE6P Arachis hypogaea HOM05D003575 ORTHO05D003587 5.7e-26 121.7 144 38.9
Lj6g0014157 Lotus japonicus HOM05D003575 ORTHO05D003587 5.7e-26 121.7 175 37.1
arahy.Tifrunner.gnm1.ann1.F2CSMS Arachis hypogaea HOM05D003575 ORTHO05D003587 7.5e-26 121.3 144 38.9
arahy.Tifrunner.gnm1.ann1.RMR7W1 Arachis hypogaea HOM05D003575 ORTHO05D003587 7.5e-26 121.3 144 38.9
Oeu029955.1 Olea europaea HOM05D003575 ORTHO05D003587 7.5e-26 121.3 144 42.4
TWI18G0759 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 7.5e-26 121.3 171 34.5
FAN18G1810 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.3e-25 120.6 171 33.3
FAN18G2204 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.3e-25 120.6 171 33.3
QL04p067739 Quercus lobata HOM05D003575 ORTHO05D003587 1.7e-25 120.2 168 35.7
TPR.G22472 Trifolium pratense HOM05D003575 ORTHO05D003587 1.7e-25 120.2 173 38.2
CSS0012601 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 2.8e-25 119.4 181 36.5
Gohir.A11G148300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 6.3e-25 118.2 148 36.5
Rhsim06G0177900 Rhododendron simsii HOM05D003575 ORTHO05D003587 6.3e-25 118.2 163 39.9
Gohir.D11G155100 Gossypium hirsutum HOM05D003575 ORTHO05D003587 8.3e-25 117.9 148 36.5
MSTRG.426 Avicennia marina HOM05D003575 ORTHO05D003587 1.4e-24 117.1 165 33.3
Gorai.007G165400 Gossypium raimondii HOM05D003575 ORTHO05D003587 1.4e-24 117.1 143 37.1
COL.COLO4_19638 Corchorus olitorius HOM05D003575 ORTHO05D003587 1.8e-24 116.7 148 34.5
Ciclev10015675m.g Citrus clementina HOM05D003575 ORTHO05D003587 2.4e-24 116.3 166 36.1
Medtr6g042090 Medicago truncatula HOM05D003575 ORTHO05D003587 2.4e-24 116.3 168 35.7
RcHm_v2.0_Chr7g0213061 Rosa chinensis HOM05D003575 ORTHO05D003587 2.4e-24 116.3 168 31.5
CANSAT21G1971 Cannabis sativa HOM05D003575 ORTHO05D003587 3.1e-24 115.9 169 34.9
CANSAT64G0731 Cannabis sativa HOM05D003575 ORTHO05D003587 3.1e-24 115.9 170 32.4
Ca_16343_v3 Cicer arietinum L. HOM05D003575 ORTHO05D003587 3.1e-24 115.9 168 34.5
Nitab4.5_0004644g0050 Nicotiana tabacum HOM05D003575 ORTHO05D003587 3.1e-24 115.9 175 37.1
Gorai.001G098800 Gossypium raimondii HOM05D003575 ORTHO05D003587 5.4e-24 115.2 165 34.5
RcHm_v2.0_Chr2g0133311 Rosa chinensis HOM05D003575 ORTHO05D003587 5.4e-24 115.2 168 33.3
Gohir.D07G092200 Gossypium hirsutum HOM05D003575 ORTHO05D003587 7.0e-24 114.8 165 34.5
Psat5g104640 Pisum sativum HOM05D003575 ORTHO05D003587 1.6e-23 113.6 144 37.5
Aqoxy5G03850 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 3.5e-23 112.5 164 39.0
VMungo0647G0230 Vigna mungo HOM05D003575 ORTHO05D003587 3.5e-23 112.5 148 38.5
Nitab4.5_0000622g0080 Nicotiana tabacum HOM05D003575 ORTHO05D003587 4.5e-23 112.1 167 38.3
SalBow1G3222 Salvia bowleyana HOM05D003575 ORTHO05D003587 7.8e-23 111.3 167 34.1
Duzib133G0340 Durio zibethinus HOM05D003575 ORTHO05D003587 1.3e-22 110.5 183 30.6
EL10Ac9g22664 Beta vulgaris HOM05D003575 ORTHO05D003587 1.7e-22 110.2 162 34.0
Glyma.13G007400 Glycine max HOM05D003575 ORTHO05D003587 2.3e-22 109.8 148 37.8
Peaxi162Scf00047g02035 Petunia axillaris HOM05D003575 ORTHO05D003587 2.3e-22 109.8 170 34.1
Prupe.3G196500 Prunus persica HOM05D003575 ORTHO05D003587 2.9e-22 109.4 170 32.4
RcHm_v2.0_Chr2g0155781 Rosa chinensis HOM05D003575 ORTHO05D003587 5.0e-22 108.6 169 34.3
THA.LOC104812766 Tarenaya hassleriana HOM05D003575 ORTHO05D003587 5.0e-22 108.6 172 33.1
FvH4_3g17720 Fragaria vesca HOM05D003575 ORTHO05D003587 6.6e-22 108.2 178 34.3
Nitab4.5_0009864g0030 Nicotiana tabacum HOM05D003575 ORTHO05D003587 8.6e-22 107.8 174 35.1
Sabra02G0168700 Salix brachista HOM05D003575 ORTHO05D003587 8.6e-22 107.8 183 32.8
Phvul.011G189400 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 1.1e-21 107.5 175 33.1
Sopen07g023850 Solanum pennellii HOM05D003575 ORTHO05D003587 1.1e-21 107.5 177 34.5
PGSC0003DMG400017406 Solanum tuberosum HOM05D003575 ORTHO05D003587 1.5e-21 107.1 177 35.0
Glyma.13G186300 Glycine max HOM05D003575 ORTHO05D003587 1.9e-21 106.7 171 31.6
Manes.12G092200 Manihot esculenta HOM05D003575 ORTHO05D003587 1.9e-21 106.7 170 33.5
SGA_v2.0_scaffold407G51066 Striga asiatica HOM05D003575 ORTHO05D003587 1.9e-21 106.7 171 33.9
Medtr6g042040 Medicago truncatula HOM05D003575 ORTHO05D003587 2.5e-21 106.3 173 32.4
FvH4_3g20410 Fragaria vesca HOM05D003575 ORTHO05D003587 3.3e-21 105.9 170 31.8
FAN11G3075 Fragaria x ananassa HOM05D003575 ORTHO05D003587 3.3e-21 105.9 170 31.8
PGSC0003DMG401004292 Solanum tuberosum HOM05D003575 ORTHO05D003587 3.3e-21 105.9 166 34.9
MD17G1118100 Malus domestica HOM05D003575 ORTHO05D003587 4.3e-21 105.5 154 33.1
ClCG02G002950 Citrullus lanatus HOM05D003575 ORTHO05D003587 5.6e-21 105.1 168 33.3
FvH4_6g40510 Fragaria vesca HOM05D003575 ORTHO05D003587 5.6e-21 105.1 172 30.8
FAN14G2021 Fragaria x ananassa HOM05D003575 ORTHO05D003587 5.6e-21 105.1 172 30.8
Solyc07g045320.3 Solanum lycopersicum HOM05D003575 ORTHO05D003587 5.6e-21 105.1 177 33.9
Sopen12g002030 Solanum pennellii HOM05D003575 ORTHO05D003587 5.6e-21 105.1 160 35.0
Sed0014111 Sechium edule HOM05D003575 ORTHO05D003587 9.5e-21 104.4 160 34.4
Solyc12g006060.2 Solanum lycopersicum HOM05D003575 ORTHO05D003587 9.5e-21 104.4 160 35.0
Aqoxy5G03849 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 1.2e-20 104.0 166 36.7
FAN21G0497 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.2e-20 104.0 170 31.2
MBI15_g44598_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 4.7e-20 102.1 175 37.1
FAN14G1012 Fragaria x ananassa HOM05D003575 ORTHO05D003587 6.1e-20 101.7 171 32.7
vmacro12070 Vaccinium macrocarpon HOM05D003575 ORTHO05D003587 6.1e-20 101.7 180 34.4
FvH4_6g40530 Fragaria vesca HOM05D003575 ORTHO05D003587 8.0e-20 101.3 171 32.7
Medtr3g082720 Medicago truncatula HOM05D003575 ORTHO05D003587 8.0e-20 101.3 173 33.5
BolC7t45906H Brassica oleracea HOM05D003575 ORTHO05D003587 1.4e-19 100.5 172 33.7
BraA03t14662Z Brassica rapa HOM05D003575 ORTHO05D003587 1.4e-19 100.5 172 34.3
VMungo1127G1165 Vigna mungo HOM05D003575 ORTHO05D003587 1.4e-19 100.5 178 31.5
C07p54200 Brassica napus HOM05D003575 ORTHO05D003587 2.3e-19 99.8 172 33.7
Migut.L00790 Erythranthe guttata HOM05D003575 ORTHO05D003587 3.0e-19 99.4 144 34.0
A03p55910 Brassica napus HOM05D003575 ORTHO05D003587 4.0e-19 99.0 172 33.7
Carub.0007s1568 Capsella rubella HOM05D003575 ORTHO05D003587 5.2e-19 98.6 167 33.5
BcaC06g32820 Brassica carinata HOM05D003575 ORTHO05D003587 6.8e-19 98.2 172 34.3
ATR0751G270 Amborella trichopoda HOM05D003575 ORTHO05D003587 1.2e-18 97.4 167 34.1
Aqoxy1G03433 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 1.2e-18 97.4 144 40.3
FAN25G1379 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.2e-18 97.4 178 32.0
FAN21G1295 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.5e-18 97.1 177 32.2
Thhalv10027138m.g Eutrema salsugineum HOM05D003575 ORTHO05D003587 5.7e-18 95.1 173 32.4
HanXRQChr04g0126401 Helianthus annuus HOM05D003575 ORTHO05D003587 5.7e-18 95.1 156 34.0
CsaV3_3G046180 Cucumis sativus L. HOM05D003575 ORTHO05D003587 7.5e-18 94.7 160 32.5
AT4G25330 Arabidopsis thaliana HOM05D003575 ORTHO05D003587 2.2e-17 93.2 169 33.1
FAN11G2840 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.2e-17 93.2 174 32.2
Lsat_1_v5_gn_7_97960 Lactuca sativa HOM05D003575 ORTHO05D003587 2.2e-17 93.2 170 31.8
AL7G27800 Arabidopsis lyrata HOM05D003575 ORTHO05D003587 2.9e-17 92.8 167 31.7
TAR624G0842 Trochodendron aralioides HOM05D003575 ORTHO05D003587 4.9e-17 92.0 120 45.0
Zm00001eb287050 Zea mays HOM05D003575 ORTHO05D003587 4.9e-17 92.0 161 32.3
HanXRQChr04g0126411 Helianthus annuus HOM05D003575 ORTHO05D003587 6.4e-17 91.7 148 35.1
RcHm_v2.0_Chr5g0034301 Rosa chinensis HOM05D003575 ORTHO05D003587 8.3e-17 91.3 148 31.1
ECA236G0897 Erigeron canadensis HOM05D003575 ORTHO05D003587 2.4e-16 89.7 170 30.6
Lsat_1_v5_gn_9_62000 Lactuca sativa HOM05D000576 ORTHO05D000368 2.4e-16 89.7 170 32.9
Lsat_1_v5_gn_7_97980 Lactuca sativa HOM05D000074 ORTHO05D001293 4.1e-16 89.0 148 33.8
FAN16G3603 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.2e-15 87.4 210 28.1
Sp7g23350 Schrenkiella parvula HOM05D003575 ORTHO05D003587 5.9e-15 85.1 167 30.5
TWI36G1168 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 1.7e-14 83.6 100 40.0
HanXRQChr16g0520571 Helianthus annuus HOM05D003575 ORTHO05D003587 3.0e-14 82.8 173 31.8
MD09G1129100 Malus domestica HOM05D003575 ORTHO05D003587 3.0e-14 82.8 101 39.6
FvH4_5g23730 Fragaria vesca HOM05D003575 ORTHO05D003587 5.0e-14 82.0 100 38.0
Cc00_g01030 Coffea canephora HOM05D003575 ORTHO05D003587 6.6e-14 81.6 105 36.2
Medtr3g082725 Medicago truncatula HOM05D003575 ORTHO05D003587 6.6e-14 81.6 106 36.8
Peaxi162Scf00802g00028 Petunia axillaris HOM05D003575 ORTHO05D003587 1.5e-13 80.5 148 31.8
MELO3C030470.2 Cucumis melo HOM05D003575 ORTHO05D003587 2.5e-13 79.7 160 31.9
ECA236G1196 Erigeron canadensis HOM05D003366 ORTHO05D004045 4.7e-12 75.5 134 32.1
Os05g0386400 Oryza sativa ssp. japonica HOM05D003575 ORTHO05D003587 1.4e-11 73.9 185 27.0
CAN.G437.6 Capsicum annuum HOM05D003575 ORTHO05D003587 5.2e-11 72.0 115 31.3
Dinv26593 Davidia involucrata HOM05D003575 ORTHO05D003587 5.2e-11 72.0 112 32.1
Hund01541 Selenicereus undatus HOM05D009102 ORTHO05D003587 6.8e-11 71.6 115 37.4
Zm00001eb264990 Zea mays HOM05D003575 ORTHO05D003587 1.5e-10 70.5 135 31.1
PGSC0003DMG400017442 Solanum tuberosum HOM05D003575 ORTHO05D003587 2.0e-10 70.1 168 30.4
Gohir.A07G087300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 3.4e-10 69.3 106 33.0
Lsat_1_v5_gn_8_78381 Lactuca sativa HOM05D003575 ORTHO05D003587 5.8e-10 68.6 125 28.8
Mapoly0066s0003 Marchantia polymorpha HOM05D040683 ORTHO05D003587 9.8e-10 67.8 139 30.9
Mapoly0072s0063 Marchantia polymorpha HOM05D040683 ORTHO05D003587 4.1e-08 62.4 144 28.5
Oeu041110.1 Olea europaea HOM05D003575 ORTHO05D003587 5.4e-08 62.0 72 36.1
SEGI_27817 Sequoiadendron giganteum HOM05D003575 ORTHO05D003587 1.6e-07 60.5 100 37.0
AagrBONN_evm.TU.Sc2ySwM_344.2846 Anthoceros agrestis HOM05D045034 ORTHO05D003587 2.7e-07 59.7 131 26.0
EL10Ac6g15056 Beta vulgaris HOM05D003575 ORTHO05D003587 5.0e-06 55.5 71 38.0
MBI15_g06462_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 5.0e-06 55.5 71 36.6


User provided reference genes

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