Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO013G0088 Papaver somniferum HOM05D002617 ORTHO05D009035 0.0e+00 1184.1 597 100.0
PSO832G3224 Papaver somniferum HOM05D002617 ORTHO05D009035 3.2e-251 871.7 515 88.2
PSO478G1567 Papaver somniferum HOM05D002617 ORTHO05D009035 9.8e-232 807.0 515 82.7
TAR629G1601 Trochodendron aralioides HOM05D002617 ORTHO05D009035 4.4e-155 552.4 547 56.9
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 5.0e-151 538.9 509 57.6
Nn3g17671 Nelumbo nucifera HOM05D002617 ORTHO05D009035 2.2e-146 523.5 517 55.3
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 1.4e-145 520.8 467 58.0
Hma1.2p1_0136F.1_g062000 Hydrangea macrophylla HOM05D002617 ORTHO05D009035 7.7e-144 515.0 499 55.7
QL02p053130 Quercus lobata HOM05D002617 ORTHO05D009035 6.5e-143 511.9 561 51.2
Prupe.3G241200 Prunus persica HOM05D002617 ORTHO05D009035 1.9e-142 510.4 565 51.0
Actinidia36305 Actinidia chinensis HOM05D002617 ORTHO05D009035 5.5e-142 508.8 533 53.3
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 1.2e-141 507.7 463 57.9
Rhsim10G0064400 Rhododendron simsii HOM05D002617 ORTHO05D009035 3.6e-141 506.1 510 54.3
CiPaw.09G147400 Carya illinoinensis HOM05D002617 ORTHO05D009035 8.0e-141 505.0 496 55.0
DCAR_011250 Daucus carota HOM05D002617 ORTHO05D009035 1.0e-140 504.6 415 61.7
FvH4_6g45490 Fragaria vesca HOM05D002617 ORTHO05D009035 1.4e-137 494.2 525 52.8
FAN05G4565 Fragaria x ananassa HOM05D002617 ORTHO05D009035 5.4e-137 492.3 526 52.5
TWI53G1449 Tripterygium wilfordii HOM05D002617 ORTHO05D009035 2.0e-136 490.3 525 50.5
Cfa007963 Carpinus fangiana HOM05D002617 ORTHO05D009035 7.7e-136 488.4 483 54.7
CSS0020455 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D009035 1.3e-135 487.6 601 48.6
Oeu043862.1 Olea europaea HOM05D002617 ORTHO05D009035 8.6e-135 485.0 493 54.2
RcHm_v2.0_Chr2g0163431 Rosa chinensis HOM05D002617 ORTHO05D009035 1.8e-132 477.2 548 50.4
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 8.9e-132 474.9 444 55.4
Manes.02G065900 Manihot esculenta HOM05D002617 ORTHO05D009035 1.5e-131 474.2 447 56.2
Aqoxy3G00430 Aquilegia oxysepala HOM05D002617 ORTHO05D009035 1.3e-130 471.1 492 53.5
Sc11g0008110 Simmondsia chinensis HOM05D002617 ORTHO05D009035 7.8e-128 461.8 419 57.0
PGR042G2862 Punica granatum HOM05D002617 ORTHO05D009035 1.3e-127 461.1 541 49.2
Glyma.13G047800 Glycine max HOM05D002617 ORTHO05D009035 6.6e-127 458.8 479 52.0
Thecc.04G140600 Theobroma cacao HOM05D002617 ORTHO05D009035 3.3e-126 456.4 565 46.9
Phvul.005G010600 Phaseolus vulgaris HOM05D002617 ORTHO05D009035 1.2e-125 454.5 407 55.8
Cc07_g05000 Coffea canephora HOM05D002617 ORTHO05D009035 4.7e-125 452.6 467 51.6
Ca_14082_v3 Cicer arietinum L. HOM05D002617 ORTHO05D009035 1.4e-124 451.1 500 49.8
Peaxi162Scf00479g00211 Petunia axillaris HOM05D002617 ORTHO05D009035 3.0e-124 449.9 448 52.9
COL.COLO4_16208 Corchorus olitorius HOM05D002617 ORTHO05D009035 6.8e-124 448.7 513 50.1
Lj4A130G15 Lonicera japonica HOM05D002617 ORTHO05D009035 8.9e-124 448.4 531 49.0
FAN14G1977 Fragaria x ananassa HOM05D002617 ORTHO05D009035 1.2e-123 448.0 522 49.4
Sabra04G0077100 Salix brachista HOM05D002617 ORTHO05D009035 2.6e-123 446.8 502 49.4
Medtr6g016985 Medicago truncatula HOM05D002617 ORTHO05D009035 9.8e-123 444.9 444 51.8
Gohir.A10G140200 Gossypium hirsutum HOM05D002617 ORTHO05D009035 1.7e-122 444.1 544 48.3
HPP92_020267 Vanilla planifolia HOM05D002617 ORTHO05D009035 1.7e-122 444.1 539 46.9
Psat1g062120 Pisum sativum HOM05D002617 ORTHO05D009035 3.7e-122 443.0 418 53.6
CiPaw.09G147200 Carya illinoinensis HOM05D002617 ORTHO05D009035 1.1e-121 441.4 414 55.3
Ah.06g191010 Amaranthus hybridus HOM05D002617 ORTHO05D009035 9.2e-121 438.3 435 54.5
Lj2g0019105 Lotus japonicus HOM05D002617 ORTHO05D009035 3.5e-120 436.4 498 48.4
Duzib151G0578 Durio zibethinus HOM05D002617 ORTHO05D009035 1.3e-119 434.5 507 48.7
Gohir.D10G126600 Gossypium hirsutum HOM05D002617 ORTHO05D009035 1.1e-118 431.4 537 46.9
Ah.06g191000 Amaranthus hybridus HOM05D002617 ORTHO05D009035 1.5e-118 431.0 435 54.0
AUR62008950 Chenopodium quinoa HOM05D002617 ORTHO05D009035 1.5e-118 431.0 529 47.6
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 8.0e-117 425.2 500 47.4
Potri.004G104500 Populus trichocarpa HOM05D002617 ORTHO05D009035 1.4e-116 424.5 415 53.3
Nitab4.5_0000612g0170 Nicotiana tabacum HOM05D002617 ORTHO05D009035 3.7e-114 416.4 425 51.5
MBI16_g23736_MAGBIO Magnolia biondii HOM05D002617 ORTHO05D009035 4.9e-114 416.0 539 45.5
EL10Ac2g04621 Beta vulgaris HOM05D002617 ORTHO05D009035 7.0e-113 412.1 426 50.5
Gorai.011G139500 Gossypium raimondii HOM05D002617 ORTHO05D009035 1.3e-111 407.9 537 45.6
Haze_14108 Corylus avellana HOM05D002617 ORTHO05D009035 1.7e-111 407.5 456 49.8
Lsat_1_v5_gn_2_86600 Lactuca sativa HOM05D002617 ORTHO05D009035 8.6e-111 405.2 524 44.3
CARHR197300 Cardamine hirsuta HOM05D002617 ORTHO05D009035 1.5e-110 404.4 410 51.2
THA.LOC104827464 Tarenaya hassleriana HOM05D002617 ORTHO05D009035 4.3e-110 402.9 422 50.5
AT5G16020 Arabidopsis thaliana HOM05D002617 ORTHO05D009035 9.5e-110 401.7 410 49.5
A10p23040 Brassica napus HOM05D002617 ORTHO05D009035 1.1e-108 398.3 409 50.6
BraA10t44373Z Brassica rapa HOM05D002617 ORTHO05D009035 1.1e-108 398.3 409 50.6
Thhalv10015867m.g Eutrema salsugineum HOM05D002617 ORTHO05D009035 1.1e-108 398.3 408 49.8
AL6G26890 Arabidopsis lyrata HOM05D002617 ORTHO05D009035 8.9e-108 395.2 410 48.3
Sopen03g009540 Solanum pennellii HOM05D002617 ORTHO05D009035 1.5e-107 394.4 465 49.0
TPR.G9672 Trifolium pratense HOM05D002617 ORTHO05D009035 2.4e-105 387.1 336 55.7
Glyma.14G157500 Glycine max HOM05D002617 ORTHO05D009035 7.1e-105 385.6 365 53.2
BcaB08g36879 Brassica carinata HOM05D002617 ORTHO05D009035 1.2e-104 384.8 482 44.6
FAN09G3897 Fragaria x ananassa HOM05D002617 ORTHO05D009035 1.6e-104 384.4 484 47.9
Carub.0006s1420 Capsella rubella HOM05D002617 ORTHO05D009035 2.7e-104 383.6 477 44.7
arahy.Tifrunner.gnm1.ann1.7SH6PF Arachis hypogaea HOM05D002617 ORTHO05D009035 3.0e-103 380.2 477 47.2
MD09G1082500 Malus domestica HOM05D002617 ORTHO05D009035 3.0e-103 380.2 351 55.8
Eucgr.J01458 Eucalyptus grandis HOM05D002617 ORTHO05D009035 3.9e-103 379.8 558 43.4
SGA_v2.0_scaffold150G36618 Striga asiatica HOM05D002617 ORTHO05D009035 1.5e-102 377.9 473 46.1
BolC9t58948H Brassica oleracea HOM05D002617 ORTHO05D009035 2.5e-102 377.1 498 44.8
Nitab4.5_0003461g0060 Nicotiana tabacum HOM05D002617 ORTHO05D009035 3.3e-102 376.7 441 48.1
BcaC04g18915 Brassica carinata HOM05D002617 ORTHO05D009035 4.3e-102 376.3 498 45.0
C09p61030 Brassica napus HOM05D002617 ORTHO05D009035 2.1e-101 374.0 494 44.3
arahy.Tifrunner.gnm1.ann1.37DWZ9 Arachis hypogaea HOM05D002617 ORTHO05D009035 3.6e-101 373.2 484 46.1
ECA238G3370 Erigeron canadensis HOM05D002617 ORTHO05D009035 3.1e-100 370.2 466 45.9
Zm00001eb161540 Zea mays HOM05D002617 ORTHO05D009035 6.8e-100 369.0 494 42.3
Aa31LG11G13590 Aethionema arabicum HOM05D002617 ORTHO05D009035 1.2e-99 368.2 467 44.1
ATR0820G227 Amborella trichopoda HOM05D002617 ORTHO05D009035 4.4e-99 366.3 546 42.1
Solyc03g045080.3 Solanum lycopersicum HOM05D002617 ORTHO05D009035 2.4e-97 360.5 391 53.5
SalBow1G3878 Salvia bowleyana HOM05D002617 ORTHO05D009035 4.6e-96 356.3 348 54.3
vmacro05580 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 3.6e-93 346.7 252 65.1
HanXRQChr14g0452391 Helianthus annuus HOM05D002617 ORTHO05D009035 6.2e-93 345.9 464 44.0
SHI30168 Sapria himalayana HOM05D002617 ORTHO05D009035 2.4e-92 344.0 480 41.5
CDE06G1275 Ceratophyllum demersum HOM05D002617 ORTHO05D009035 1.3e-87 328.2 336 50.9
Atru.chr8.789 Acer truncatum HOM05D002617 ORTHO05D009035 2.3e-87 327.4 269 59.1
Cpa.g.sc179.39 Carica papaya HOM05D002617 ORTHO05D009035 3.6e-85 320.1 558 38.4
CANSAT56G0222 Cannabis sativa HOM05D002617 ORTHO05D009035 1.1e-84 318.5 270 58.5
PGSC0003DMG400018767 Solanum tuberosum HOM05D002617 ORTHO05D009035 5.3e-84 316.2 426 46.0
AUR62014551 Chenopodium quinoa HOM05D002617 ORTHO05D009035 3.2e-81 307.0 374 45.7
Lalb_Chr10g0092311 Lupinus albus HOM05D002617 ORTHO05D009035 4.6e-80 303.1 266 55.6
CAN.G153.15 Capsicum annuum HOM05D002617 ORTHO05D009035 5.1e-79 299.7 459 42.5
Os01g0605400 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D009035 3.2e-73 280.4 474 36.7
FAN02G3008 Fragaria x ananassa HOM05D002617 ORTHO05D009035 6.9e-60 236.1 345 44.3
unitig_899.g15127 Utricularia gibba HOM05D002617 ORTHO05D009035 1.5e-59 235.0 502 33.9
FAN02G3888 Fragaria x ananassa HOM05D002617 ORTHO05D009035 7.7e-59 232.6 162 64.8
CANSAT56G3033 Cannabis sativa HOM05D002617 ORTHO05D009035 2.1e-56 224.6 385 44.7
Actinidia18118 Actinidia chinensis HOM05D002617 ORTHO05D009035 3.1e-44 184.1 141 57.4
CiPaw.09G170800 Carya illinoinensis HOM05D002617 ORTHO05D009035 1.4e-41 175.3 221 49.3
CANSAT56G4171 Cannabis sativa HOM05D002617 ORTHO05D009035 8.2e-37 159.5 112 63.4
arahy.Tifrunner.gnm1.ann1.3A0B2Z Arachis hypogaea HOM05D002617 ORTHO05D009035 2.6e-30 137.9 253 39.5
vmacro05579 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 2.8e-29 134.4 259 40.9
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 2.4e-28 131.3 159 50.9
MSTRG.23827 Avicennia marina HOM05D002617 ORTHO05D009035 3.1e-28 131.0 266 40.6
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 1.2e-27 129.0 125 59.2
PSO832G0107 Papaver somniferum HOM05D003407 ORTHO05D001026 4.1e-20 104.0 71 71.8
PSO675G1658 Papaver somniferum HOM05D000003 ORTHO05D000004 1.6e-16 92.0 71 62.0
PSO384G0287 Papaver somniferum HOM05D003407 ORTHO05D001026 3.6e-16 90.9 72 59.7
PSO447G0188 Papaver somniferum HOM05D003407 ORTHO05D001026 3.6e-16 90.9 71 60.6
PSO063G0215 Papaver somniferum HOM05D003407 ORTHO05D001026 6.1e-16 90.1 71 60.6
PSO017G4282 Papaver somniferum HOM05D000003 ORTHO05D000004 1.4e-15 89.0 70 64.3
PSO675G7192 Papaver somniferum HOM05D000003 ORTHO05D000004 2.3e-15 88.2 72 59.7
SMO116G0487 Selaginella moellendorffii HOM05D002617 ORTHO05D009035 5.2e-15 87.0 131 32.8
PSO832G0030 Papaver somniferum HOM05D003407 ORTHO05D001026 6.8e-15 86.7 67 62.7
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.4e-14 84.3 59 64.4
PSO133G0079 Papaver somniferum HOM05D000003 ORTHO05D000004 1.7e-13 82.0 65 63.1
PSO210G4018 Papaver somniferum HOM05D003407 ORTHO05D001026 2.2e-13 81.6 66 60.6
PSO017G4815 Papaver somniferum HOM05D000003 ORTHO05D001026 4.5e-11 73.9 72 52.8
PSO541G1751 Papaver somniferum HOM05D000003 ORTHO05D001026 7.8e-11 73.2 70 57.1
Lalb_Chr10g0092321 Lupinus albus HOM05D002617 ORTHO05D009035 1.0e-10 72.8 68 55.9
PSO478G1836 Papaver somniferum HOM05D000003 ORTHO05D001026 1.3e-10 72.4 71 49.3
TAR629G1810 Trochodendron aralioides HOM05D004423 ORTHO05D005464 1.7e-10 72.0 43 72.1
PSO170G6354 Papaver somniferum HOM05D003407 ORTHO05D001026 2.9e-10 71.2 73 52.1
PSO210G2497 Papaver somniferum HOM05D000003 ORTHO05D000004 5.0e-10 70.5 70 48.6
PSO210G7712 Papaver somniferum HOM05D000003 ORTHO05D000004 4.3e-09 67.4 67 49.3
PSO063G0862 Papaver somniferum HOM05D000003 ORTHO05D000004 9.5e-09 66.2 84 39.3
PSO782G1750 Papaver somniferum HOM05D003407 ORTHO05D001026 2.8e-08 64.7 63 50.8
Lalb_Chr10g0092331 Lupinus albus HOM05D002617 ORTHO05D009035 6.1e-08 63.5 164 33.5
PSO384G4326 Papaver somniferum HOM05D003407 ORTHO05D001026 1.4e-07 62.4 70 48.6
PSO782G1811 Papaver somniferum HOM05D000003 ORTHO05D000004 1.4e-07 62.4 71 49.3
PSO170G3085 Papaver somniferum HOM05D000003 ORTHO05D000004 3.1e-07 61.2 70 45.7
TAR629G3114 Trochodendron aralioides HOM05D004526 ORTHO05D002794 3.1e-07 61.2 37 75.7
Nn4g26093 Nelumbo nucifera HOM05D001650 ORTHO05D001592 4.0e-07 60.8 84 46.4
PSO591G0286 Papaver somniferum HOM05D000003 ORTHO05D000004 5.2e-07 60.5 67 46.3
PSO541G2256 Papaver somniferum HOM05D000003 ORTHO05D000004 6.8e-07 60.1 55 52.7
PSO675G3299 Papaver somniferum HOM05D003407 ORTHO05D001026 6.8e-07 60.1 71 43.7
PSO675G0956 Papaver somniferum HOM05D003407 ORTHO05D001026 2.0e-06 58.5 70 42.9
PSO764G0315 Papaver somniferum HOM05D003407 ORTHO05D001026 2.6e-06 58.2 66 45.5
PSO675G9216 Papaver somniferum HOM05D000003 ORTHO05D000004 7.5e-06 56.6 66 40.9


User provided reference genes

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