Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO013G0020 Papaver somniferum HOM05D003575 ORTHO05D003587 8.9e-104 380.2 180 100.0
PSO013G0119 Papaver somniferum HOM05D003575 ORTHO05D003587 1.9e-93 345.9 180 90.0
PSO832G1021 Papaver somniferum HOM05D003575 ORTHO05D003587 9.3e-93 343.6 180 88.9
PSO013G0348 Papaver somniferum HOM05D003575 ORTHO05D003587 6.2e-89 330.9 183 87.4
PSO013G0383 Papaver somniferum HOM05D003575 ORTHO05D003587 1.1e-88 330.1 183 86.9
PSO832G3669 Papaver somniferum HOM05D003575 ORTHO05D003587 1.8e-88 329.3 183 86.9
PSO339G1364 Papaver somniferum HOM05D003575 ORTHO05D003587 8.7e-67 257.3 173 69.4
PSO339G4641 Papaver somniferum HOM05D003575 ORTHO05D003587 8.7e-67 257.3 173 69.4
PSO013G0266 Papaver somniferum HOM05D003575 ORTHO05D003587 1.1e-64 250.4 173 68.8
PSO170G1005 Papaver somniferum HOM05D003575 ORTHO05D003587 6.5e-62 241.1 173 65.9
PSO591G0010 Papaver somniferum HOM05D003575 ORTHO05D003587 8.2e-57 224.2 169 60.9
PSO832G1827 Papaver somniferum HOM05D003575 ORTHO05D003587 1.8e-56 223.0 173 61.8
PSO675G6399 Papaver somniferum HOM05D003575 ORTHO05D003587 3.0e-43 179.1 178 49.4
PSO541G2609 Papaver somniferum HOM05D003575 ORTHO05D003587 4.0e-43 178.7 178 50.0
PSO339G3010 Papaver somniferum HOM05D003575 ORTHO05D003587 7.7e-39 164.5 110 67.3
PSO017G4852 Papaver somniferum HOM05D003575 ORTHO05D003587 2.2e-38 162.9 166 50.0
PSO017G1253 Papaver somniferum HOM05D003575 ORTHO05D003587 3.4e-34 149.1 162 45.7
TAR626G1391 Trochodendron aralioides HOM05D003575 ORTHO05D003587 3.2e-29 132.5 166 44.0
Haze_12603 Corylus avellana HOM05D003366 ORTHO05D004045 1.0e-27 127.5 169 38.5
Haze_12614 Corylus avellana HOM05D003366 ORTHO05D004045 1.8e-27 126.7 165 38.8
Hma1.2p1_0599F.1_g187070 Hydrangea macrophylla HOM05D003575 ORTHO05D003587 1.8e-27 126.7 158 41.8
AUR62029125 Chenopodium quinoa HOM05D003575 ORTHO05D003587 1.2e-26 124.0 164 35.4
Thecc.01G197600 Theobroma cacao HOM05D003575 ORTHO05D003587 3.4e-26 122.5 178 33.1
CSS0035464 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 5.7e-26 121.7 173 38.2
Ah.01g002520 Amaranthus hybridus HOM05D004224 ORTHO05D006437 7.5e-26 121.3 157 35.0
AUR62014996 Chenopodium quinoa HOM05D003575 ORTHO05D003587 7.5e-26 121.3 164 36.6
AUR62035876 Chenopodium quinoa HOM05D003575 ORTHO05D003587 7.5e-26 121.3 164 35.4
Nn1g03152 Nelumbo nucifera HOM05D003575 ORTHO05D003587 9.8e-26 120.9 166 41.0
DCAR_019672 Daucus carota HOM05D003575 ORTHO05D003587 2.8e-25 119.4 165 35.8
Phvul.007G122046 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 2.8e-25 119.4 165 38.2
arahy.Tifrunner.gnm1.ann1.04VE6P Arachis hypogaea HOM05D003575 ORTHO05D003587 4.9e-25 118.6 144 38.2
CDE04G2197 Ceratophyllum demersum HOM05D003575 ORTHO05D003587 4.9e-25 118.6 170 36.5
arahy.Tifrunner.gnm1.ann1.F2CSMS Arachis hypogaea HOM05D003575 ORTHO05D003587 6.3e-25 118.2 144 38.2
arahy.Tifrunner.gnm1.ann1.RMR7W1 Arachis hypogaea HOM05D003575 ORTHO05D003587 6.3e-25 118.2 144 38.2
Lj6g0014157 Lotus japonicus HOM05D003575 ORTHO05D003587 8.3e-25 117.9 171 36.3
Manes.12G063604 Manihot esculenta HOM05D003575 ORTHO05D003587 1.1e-24 117.5 167 37.1
Prupe.3G196400 Prunus persica HOM05D003575 ORTHO05D003587 1.1e-24 117.5 169 33.7
TPR.G22472 Trifolium pratense HOM05D003575 ORTHO05D003587 1.4e-24 117.1 175 38.3
SHI10168 Sapria himalayana HOM05D003575 ORTHO05D003587 1.8e-24 116.7 153 34.0
CiPaw.04G197600 Carya illinoinensis HOM05D003575 ORTHO05D003587 3.1e-24 115.9 169 33.1
QL04p067739 Quercus lobata HOM05D003575 ORTHO05D003587 3.1e-24 115.9 166 35.5
RcHm_v2.0_Chr2g0133241 Rosa chinensis HOM05D003575 ORTHO05D003587 5.4e-24 115.2 168 33.3
EL10Ac9g22664 Beta vulgaris HOM05D003575 ORTHO05D003587 7.0e-24 114.8 162 34.6
FAN18G1810 Fragaria x ananassa HOM05D003575 ORTHO05D003587 9.2e-24 114.4 172 33.1
FAN18G2204 Fragaria x ananassa HOM05D003575 ORTHO05D003587 9.2e-24 114.4 172 33.1
Potri.002G216900 Populus trichocarpa HOM05D003575 ORTHO05D003587 1.2e-23 114.0 167 35.3
CSS0012601 Camellia sinensis var. sinensis HOM05D003575 ORTHO05D003587 2.7e-23 112.8 186 35.5
Nitab4.5_0004644g0050 Nicotiana tabacum HOM05D003575 ORTHO05D003587 2.7e-23 112.8 175 37.7
Oeu029955.1 Olea europaea HOM05D003575 ORTHO05D003587 2.7e-23 112.8 144 39.6
RcHm_v2.0_Chr7g0213061 Rosa chinensis HOM05D003575 ORTHO05D003587 2.7e-23 112.8 169 32.0
TWI18G0759 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 3.5e-23 112.5 169 33.1
COL.COLO4_19638 Corchorus olitorius HOM05D003575 ORTHO05D003587 4.5e-23 112.1 148 34.5
Gorai.001G098800 Gossypium raimondii HOM05D003575 ORTHO05D003587 4.5e-23 112.1 168 34.5
Gohir.D07G092200 Gossypium hirsutum HOM05D003575 ORTHO05D003587 5.9e-23 111.7 168 34.5
Gorai.007G165400 Gossypium raimondii HOM05D003575 ORTHO05D003587 5.9e-23 111.7 164 34.8
Actinidia07857 Actinidia chinensis HOM05D003575 ORTHO05D003587 7.8e-23 111.3 166 36.7
Medtr6g042090 Medicago truncatula HOM05D003575 ORTHO05D003587 7.8e-23 111.3 171 34.5
Lalb_Chr14g0362581 Lupinus albus HOM05D003575 ORTHO05D003587 1.3e-22 110.5 169 34.3
Gohir.A11G148300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 1.7e-22 110.2 170 32.9
Gohir.D11G155100 Gossypium hirsutum HOM05D003575 ORTHO05D003587 2.3e-22 109.8 170 32.9
CANSAT21G1971 Cannabis sativa HOM05D003575 ORTHO05D003587 2.9e-22 109.4 169 33.1
Ca_16343_v3 Cicer arietinum L. HOM05D003575 ORTHO05D003587 2.9e-22 109.4 166 33.7
CANSAT64G0731 Cannabis sativa HOM05D003575 ORTHO05D003587 3.8e-22 109.0 170 31.2
Ciclev10015675m.g Citrus clementina HOM05D003575 ORTHO05D003587 3.8e-22 109.0 166 34.9
Nitab4.5_0009864g0030 Nicotiana tabacum HOM05D003575 ORTHO05D003587 3.8e-22 109.0 170 35.3
VMungo0647G0230 Vigna mungo HOM05D003575 ORTHO05D003587 5.0e-22 108.6 148 37.2
MSTRG.426 Avicennia marina HOM05D003575 ORTHO05D003587 6.6e-22 108.2 165 31.5
Prupe.3G196500 Prunus persica HOM05D003575 ORTHO05D003587 6.6e-22 108.2 170 32.4
Glyma.13G186300 Glycine max HOM05D003575 ORTHO05D003587 8.6e-22 107.8 175 30.9
Sopen07g023850 Solanum pennellii HOM05D003575 ORTHO05D003587 1.1e-21 107.5 170 34.7
PGSC0003DMG400017406 Solanum tuberosum HOM05D003575 ORTHO05D003587 1.1e-21 107.5 166 36.1
Peaxi162Scf00047g02035 Petunia axillaris HOM05D003575 ORTHO05D003587 1.9e-21 106.7 167 34.1
SalBow1G3222 Salvia bowleyana HOM05D003575 ORTHO05D003587 1.9e-21 106.7 167 32.9
Aqoxy5G03850 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 2.5e-21 106.3 146 41.1
Duzib133G0340 Durio zibethinus HOM05D003575 ORTHO05D003587 2.5e-21 106.3 180 31.1
Psat5g104640 Pisum sativum HOM05D003575 ORTHO05D003587 2.5e-21 106.3 144 36.8
Rhsim06G0177900 Rhododendron simsii HOM05D003575 ORTHO05D003587 2.5e-21 106.3 163 37.4
Sed0014111 Sechium edule HOM05D003575 ORTHO05D003587 2.5e-21 106.3 162 34.0
Nitab4.5_0000622g0080 Nicotiana tabacum HOM05D003575 ORTHO05D003587 3.3e-21 105.9 167 38.3
RcHm_v2.0_Chr2g0133311 Rosa chinensis HOM05D003575 ORTHO05D003587 3.3e-21 105.9 168 32.1
Solyc07g045320.3 Solanum lycopersicum HOM05D003575 ORTHO05D003587 4.3e-21 105.5 166 34.9
PGSC0003DMG401004292 Solanum tuberosum HOM05D003575 ORTHO05D003587 4.3e-21 105.5 178 34.8
MD17G1118100 Malus domestica HOM05D003575 ORTHO05D003587 5.6e-21 105.1 154 33.1
RcHm_v2.0_Chr2g0155781 Rosa chinensis HOM05D003575 ORTHO05D003587 7.3e-21 104.8 169 32.5
Sopen12g002030 Solanum pennellii HOM05D003575 ORTHO05D003587 1.2e-20 104.0 176 34.1
FvH4_3g17720 Fragaria vesca HOM05D003575 ORTHO05D003587 1.6e-20 103.6 178 33.7
Glyma.13G007400 Glycine max HOM05D003575 ORTHO05D003587 1.6e-20 103.6 143 37.8
Phvul.011G189400 Phaseolus vulgaris HOM05D003575 ORTHO05D003587 1.6e-20 103.6 166 32.5
Solyc12g006060.2 Solanum lycopersicum HOM05D003575 ORTHO05D003587 2.1e-20 103.2 176 34.7
THA.LOC104812766 Tarenaya hassleriana HOM05D003575 ORTHO05D003587 2.8e-20 102.8 172 32.6
FAN21G0497 Fragaria x ananassa HOM05D003575 ORTHO05D003587 4.7e-20 102.1 170 30.6
ClCG02G002950 Citrullus lanatus HOM05D003575 ORTHO05D003587 1.4e-19 100.5 168 31.5
FAN14G1012 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.4e-19 100.5 169 31.4
FvH4_6g40530 Fragaria vesca HOM05D003575 ORTHO05D003587 1.8e-19 100.1 169 31.4
FvH4_3g20410 Fragaria vesca HOM05D003575 ORTHO05D003587 2.3e-19 99.8 170 30.0
FvH4_6g40510 Fragaria vesca HOM05D003575 ORTHO05D003587 2.3e-19 99.8 146 32.9
FAN11G3075 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.3e-19 99.8 170 30.0
FAN14G2021 Fragaria x ananassa HOM05D003575 ORTHO05D003587 2.3e-19 99.8 146 32.9
Aqoxy5G03849 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 5.2e-19 98.6 166 35.5
Manes.12G092200 Manihot esculenta HOM05D003575 ORTHO05D003587 5.2e-19 98.6 169 32.5
SGA_v2.0_scaffold407G51066 Striga asiatica HOM05D003575 ORTHO05D003587 6.8e-19 98.2 172 32.0
Medtr3g082720 Medicago truncatula HOM05D003575 ORTHO05D003587 8.9e-19 97.8 171 32.7
Sabra02G0168700 Salix brachista HOM05D003575 ORTHO05D003587 8.9e-19 97.8 183 31.1
Medtr6g042040 Medicago truncatula HOM05D003575 ORTHO05D003587 2.6e-18 96.3 180 30.6
MBI15_g44598_MAGBIO Magnolia biondii HOM05D003575 ORTHO05D003587 3.4e-18 95.9 175 36.0
Migut.L00790 Erythranthe guttata HOM05D003575 ORTHO05D003587 4.4e-18 95.5 144 32.6
CsaV3_3G046180 Cucumis sativus L. HOM05D003575 ORTHO05D003587 9.8e-18 94.4 160 31.2
FAN21G1295 Fragaria x ananassa HOM05D003575 ORTHO05D003587 1.3e-17 94.0 177 31.6
VMungo1127G1165 Vigna mungo HOM05D003575 ORTHO05D003587 1.7e-17 93.6 167 30.5
Aqoxy1G03433 Aquilegia oxysepala HOM05D003575 ORTHO05D003587 2.9e-17 92.8 144 39.6
vmacro12070 Vaccinium macrocarpon HOM05D003575 ORTHO05D003587 3.7e-17 92.4 189 31.7
FAN25G1379 Fragaria x ananassa HOM05D003575 ORTHO05D003587 4.9e-17 92.0 178 30.9
Carub.0007s1568 Capsella rubella HOM05D003575 ORTHO05D003587 1.1e-16 90.9 169 33.1
BolC7t45906H Brassica oleracea HOM05D003575 ORTHO05D003587 2.4e-16 89.7 167 31.1
BraA03t14662Z Brassica rapa HOM05D003575 ORTHO05D003587 2.4e-16 89.7 167 31.7
ATR0751G270 Amborella trichopoda HOM05D003575 ORTHO05D003587 4.1e-16 89.0 167 32.9
AT4G25330 Arabidopsis thaliana HOM05D003575 ORTHO05D003587 4.1e-16 89.0 175 32.0
BcaC06g32820 Brassica carinata HOM05D003575 ORTHO05D003587 4.1e-16 89.0 167 32.3
C07p54200 Brassica napus HOM05D003575 ORTHO05D003587 4.1e-16 89.0 167 31.1
FAN11G2840 Fragaria x ananassa HOM05D003575 ORTHO05D003587 4.1e-16 89.0 174 31.6
A03p55910 Brassica napus HOM05D003575 ORTHO05D003587 7.0e-16 88.2 167 31.1
HanXRQChr04g0126401 Helianthus annuus HOM05D003575 ORTHO05D003587 1.2e-15 87.4 156 32.1
Zm00001eb287050 Zea mays HOM05D003575 ORTHO05D003587 2.0e-15 86.7 161 31.7
AL7G27800 Arabidopsis lyrata HOM05D003575 ORTHO05D003587 2.7e-15 86.3 174 32.2
Thhalv10027138m.g Eutrema salsugineum HOM05D003575 ORTHO05D003587 2.7e-15 86.3 167 30.5
FAN16G3603 Fragaria x ananassa HOM05D003575 ORTHO05D003587 3.5e-15 85.9 212 28.3
MELO3C030470.2 Cucumis melo HOM05D003575 ORTHO05D003587 5.9e-15 85.1 160 30.6
HanXRQChr04g0126411 Helianthus annuus HOM05D003575 ORTHO05D003587 5.9e-15 85.1 154 33.8
Lsat_1_v5_gn_7_97960 Lactuca sativa HOM05D003575 ORTHO05D003587 1.0e-14 84.3 168 29.8
TAR624G0842 Trochodendron aralioides HOM05D003575 ORTHO05D003587 1.3e-14 84.0 113 45.1
Medtr3g082725 Medicago truncatula HOM05D003575 ORTHO05D003587 1.9e-13 80.1 106 36.8
FvH4_5g23730 Fragaria vesca HOM05D003575 ORTHO05D003587 3.3e-13 79.3 100 38.0
HanXRQChr16g0520571 Helianthus annuus HOM05D003575 ORTHO05D003587 3.3e-13 79.3 153 32.7
MD09G1129100 Malus domestica HOM05D003575 ORTHO05D003587 3.3e-13 79.3 101 39.6
TWI36G1168 Tripterygium wilfordii HOM05D003575 ORTHO05D003587 3.3e-13 79.3 100 38.0
Cc00_g01030 Coffea canephora HOM05D003575 ORTHO05D003587 5.6e-13 78.6 105 36.2
Lsat_1_v5_gn_7_97980 Lactuca sativa HOM05D000074 ORTHO05D001293 9.5e-13 77.8 148 31.1
ECA236G0897 Erigeron canadensis HOM05D003575 ORTHO05D003587 2.1e-12 76.6 170 27.6
Lsat_1_v5_gn_9_62000 Lactuca sativa HOM05D000576 ORTHO05D000368 6.2e-12 75.1 168 29.2
Sp7g23350 Schrenkiella parvula HOM05D003575 ORTHO05D003587 6.2e-12 75.1 167 29.3
CAN.G437.6 Capsicum annuum HOM05D003575 ORTHO05D003587 1.1e-11 74.3 115 31.3
Peaxi162Scf00802g00028 Petunia axillaris HOM05D003575 ORTHO05D003587 1.1e-11 74.3 170 27.6
ECA236G1196 Erigeron canadensis HOM05D003366 ORTHO05D004045 1.2e-10 70.9 134 30.6
PGSC0003DMG400017442 Solanum tuberosum HOM05D003575 ORTHO05D003587 1.2e-10 70.9 179 28.5
Gohir.A07G087300 Gossypium hirsutum HOM05D003575 ORTHO05D003587 4.4e-10 68.9 106 33.0
Hund01541 Selenicereus undatus HOM05D009102 ORTHO05D003587 4.4e-10 68.9 115 37.4
Sed0014379 Sechium edule HOM05D003575 ORTHO05D003587 2.9e-09 66.2 99 36.4
Zm00001eb264990 Zea mays HOM05D003575 ORTHO05D003587 2.9e-09 66.2 135 30.4
Dinv26593 Davidia involucrata HOM05D003575 ORTHO05D003587 1.4e-08 63.9 112 30.4
Mapoly0066s0003 Marchantia polymorpha HOM05D040683 ORTHO05D003587 1.4e-08 63.9 139 28.8
Mapoly0021s0099 Marchantia polymorpha HOM05D003575 ORTHO05D003587 1.6e-07 60.5 152 27.0
SEGI_27817 Sequoiadendron giganteum HOM05D003575 ORTHO05D003587 1.0e-06 57.8 100 34.0
Mapoly0072s0063 Marchantia polymorpha HOM05D040683 ORTHO05D003587 1.3e-06 57.4 144 26.4
Oeu041110.1 Olea europaea HOM05D003575 ORTHO05D003587 1.3e-06 57.4 72 36.1
EL10Ac6g15056 Beta vulgaris HOM05D003575 ORTHO05D003587 3.9e-06 55.8 71 36.6
EL10Ac9g22882 Beta vulgaris HOM05D003575 ORTHO05D003587 8.6e-06 54.7 71 36.6


User provided reference genes

Program Settings