Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00006925 Prasinoderma coloniale HOM05D007563 ORTHO05D009546 2.3e-79 299.3 204 100.0
CSS0014548 Camellia sinensis var. sinensis HOM05D007563 ORTHO05D009546 9.4e-17 91.3 98 43.9
HanXRQChr16g0528531 Helianthus annuus HOM05D007563 ORTHO05D009546 1.2e-16 90.9 104 43.3
Nitab4.5_0000069g0150 Nicotiana tabacum HOM05D007563 ORTHO05D009546 1.6e-16 90.5 106 45.3
Os02g0635700 Oryza sativa ssp. japonica HOM05D007563 ORTHO05D009546 1.6e-16 90.5 104 44.2
PGSC0003DMG400016398 Solanum tuberosum HOM05D007563 ORTHO05D009546 2.1e-16 90.1 107 43.0
Zm00001eb248280 Zea mays HOM05D007563 ORTHO05D009546 2.1e-16 90.1 105 42.9
Solyc01g008260.4 Solanum lycopersicum HOM05D007563 ORTHO05D009546 2.7e-16 89.7 107 43.0
Sopen01g003780 Solanum pennellii HOM05D007563 ORTHO05D009546 2.7e-16 89.7 107 43.9
ATR0618G415 Amborella trichopoda HOM05D007563 ORTHO05D009546 4.7e-16 89.0 109 42.2
CAN.G282.47 Capsicum annuum HOM05D007563 ORTHO05D009546 4.7e-16 89.0 106 44.3
TAR622G0982 Trochodendron aralioides HOM05D007563 ORTHO05D009546 1.4e-15 87.4 104 41.3
TWI53G1187 Tripterygium wilfordii HOM05D007563 ORTHO05D009546 5.2e-15 85.5 104 39.4
MD16G1243400 Malus domestica HOM05D007563 ORTHO05D009546 6.7e-15 85.1 104 43.3
CDE04G1527 Ceratophyllum demersum HOM05D007563 ORTHO05D009546 8.8e-15 84.7 107 42.1
Nitab4.5_0002387g0070 Nicotiana tabacum HOM05D007563 ORTHO05D009546 8.8e-15 84.7 103 43.7
PSO478G0646 Papaver somniferum HOM05D007563 ORTHO05D009546 8.8e-15 84.7 105 39.0
Peaxi162Scf00021g02222 Petunia axillaris HOM05D007563 ORTHO05D009546 8.8e-15 84.7 103 41.7
vmacro15986 Vaccinium macrocarpon HOM05D007563 ORTHO05D009546 8.8e-15 84.7 104 41.3
Thecc.02G156900 Theobroma cacao HOM05D007563 ORTHO05D009546 1.2e-14 84.3 104 39.4
HPP92_005058 Vanilla planifolia HOM05D007563 ORTHO05D009546 1.2e-14 84.3 95 44.2
Nn3g18621 Nelumbo nucifera HOM05D007563 ORTHO05D009546 1.5e-14 84.0 103 38.8
GSVIVG01026146001 Vitis vinifera HOM05D007563 ORTHO05D009546 2.0e-14 83.6 112 39.3
Ciclev10032938m.g Citrus clementina HOM05D007563 ORTHO05D009546 2.6e-14 83.2 105 41.9
DCAR_026884 Daucus carota HOM05D007563 ORTHO05D009546 2.6e-14 83.2 98 38.8
Lj3A848G48 Lonicera japonica HOM05D007563 ORTHO05D009546 2.6e-14 83.2 105 41.0
PSO017G0076 Papaver somniferum HOM05D007563 ORTHO05D009546 2.6e-14 83.2 105 37.1
MSTRG.8089 Avicennia marina HOM05D007563 ORTHO05D009546 3.3e-14 82.8 100 43.0
MBI03_g13825_MAGBIO Magnolia biondii HOM05D007563 ORTHO05D009546 3.3e-14 82.8 99 42.4
THA.LOC104818377 Tarenaya hassleriana HOM05D007563 ORTHO05D009546 4.4e-14 82.4 111 37.8
AT5G08320 Arabidopsis thaliana HOM05D007563 ORTHO05D009546 5.7e-14 82.0 107 40.2
Mapoly0067s0084 Marchantia polymorpha HOM05D007563 ORTHO05D009546 5.7e-14 82.0 114 39.5
SMO201G0195 Selaginella moellendorffii HOM05D007563 ORTHO05D009546 5.7e-14 82.0 105 41.9
RcHm_v2.0_Chr4g0398681 Rosa chinensis HOM05D007563 ORTHO05D009546 7.5e-14 81.6 103 42.7
unitig_22.g6356 Utricularia gibba HOM05D007563 ORTHO05D009546 7.5e-14 81.6 99 41.4
Prupe.1G070600 Prunus persica HOM05D007563 ORTHO05D009546 9.7e-14 81.3 104 40.4
Hund24382 Selenicereus undatus HOM05D007563 ORTHO05D009546 1.3e-13 80.9 103 38.8
Sc21g0003780 Simmondsia chinensis HOM05D007563 ORTHO05D009546 1.3e-13 80.9 103 40.8
Atru.chr11.1116 Acer truncatum HOM05D007563 ORTHO05D009546 2.2e-13 80.1 102 37.3
Cfa008765 Carpinus fangiana HOM05D007563 ORTHO05D009546 2.2e-13 80.1 103 38.8
Duzib248G0691 Durio zibethinus HOM05D007563 ORTHO05D009546 2.8e-13 79.7 110 38.2
ECA234G0294 Erigeron canadensis HOM05D007563 ORTHO05D009546 2.8e-13 79.7 101 39.6
Gorai.013G068700 Gossypium raimondii HOM05D007563 ORTHO05D009546 2.8e-13 79.7 106 39.6
QL03p034961 Quercus lobata HOM05D007563 ORTHO05D009546 2.8e-13 79.7 103 39.8
AL6G18750 Arabidopsis lyrata HOM05D007563 ORTHO05D009546 3.7e-13 79.3 109 37.6
Glyma.10G285700 Glycine max HOM05D007563 ORTHO05D009546 3.7e-13 79.3 104 37.5
Hma1.2p1_0513F.1_g169460 Hydrangea macrophylla HOM05D007563 ORTHO05D009546 3.7e-13 79.3 102 39.2
Rhsim09G0069800 Rhododendron simsii HOM05D007563 ORTHO05D009546 3.7e-13 79.3 105 39.0
Sp6g34630 Schrenkiella parvula HOM05D007563 ORTHO05D009546 4.8e-13 79.0 105 40.0
FvH4_4g06750 Fragaria vesca HOM05D007563 ORTHO05D009546 6.3e-13 78.6 103 39.8
FAN12G1059 Fragaria x ananassa HOM05D007563 ORTHO05D009546 6.3e-13 78.6 103 39.8
Gohir.A13G061300 Gossypium hirsutum HOM05D007563 ORTHO05D009546 6.3e-13 78.6 103 39.8
Aa31LG3G18250 Aethionema arabicum HOM05D007563 ORTHO05D009546 8.2e-13 78.2 101 38.6
Thhalv10014924m.g Eutrema salsugineum HOM05D007563 ORTHO05D009546 8.2e-13 78.2 107 38.3
Gohir.D13G060600 Gossypium hirsutum HOM05D007563 ORTHO05D009546 1.1e-12 77.8 103 39.8
Lsat_1_v5_gn_4_64620 Lactuca sativa HOM05D007563 ORTHO05D009546 1.1e-12 77.8 110 37.3
Phvul.007G015100 Phaseolus vulgaris HOM05D007563 ORTHO05D009546 1.1e-12 77.8 104 36.5
Pp3c13_24580 Physcomitrium patens HOM05D007563 ORTHO05D009546 1.1e-12 77.8 116 39.7
SEGI_01872 Sequoiadendron giganteum HOM05D007563 ORTHO05D009546 1.4e-12 77.4 113 35.4
Carub.0006s0721 Capsella rubella HOM05D007563 ORTHO05D009546 1.8e-12 77.0 107 38.3
Potri.005G090400 Populus trichocarpa HOM05D007563 ORTHO05D009546 1.8e-12 77.0 104 39.4
Lj5g0022450 Lotus japonicus HOM05D007563 ORTHO05D009546 2.4e-12 76.6 106 37.7
CARHR204780 Cardamine hirsuta HOM05D007563 ORTHO05D009546 3.1e-12 76.3 104 37.5
Eucgr.J00882 Eucalyptus grandis HOM05D007563 ORTHO05D009546 3.1e-12 76.3 108 39.8
Psat6g233640 Pisum sativum HOM05D007563 ORTHO05D009546 3.1e-12 76.3 107 38.3
PGR044G2202 Punica granatum HOM05D007563 ORTHO05D009546 3.1e-12 76.3 113 39.8
COL.COLO4_33083 Corchorus olitorius HOM05D007563 ORTHO05D009546 4.1e-12 75.9 102 37.3
Lalb_Chr06g0163901 Lupinus albus HOM05D007563 ORTHO05D009546 5.3e-12 75.5 107 35.5
VMungo0720G1614 Vigna mungo HOM05D007563 ORTHO05D009546 5.3e-12 75.5 104 34.6
Aqoxy2G00835 Aquilegia oxysepala HOM05D007563 ORTHO05D009546 7.0e-12 75.1 104 40.4
AUR62017724 Chenopodium quinoa HOM05D007563 ORTHO05D009546 1.6e-11 73.9 104 37.5
CANSAT78G0704 Cannabis sativa HOM05D007563 ORTHO05D009546 2.7e-11 73.2 103 39.8
Ca_11254_v3 Cicer arietinum L. HOM05D007563 ORTHO05D009546 3.5e-11 72.8 106 35.8
C02p03530 Brassica napus HOM05D007563 ORTHO05D009546 4.5e-11 72.4 103 35.9
Medtr1g114370 Medicago truncatula HOM05D007563 ORTHO05D009546 5.9e-11 72.0 106 37.7
Nitab4.5_0000069g0170 Nicotiana tabacum HOM05D007563 ORTHO05D009546 7.7e-11 71.6 106 38.7
TPR.G4067 Trifolium pratense HOM05D007563 ORTHO05D009546 7.7e-11 71.6 108 35.2
arahy.Tifrunner.gnm1.ann1.B4R3WF Arachis hypogaea HOM05D007563 ORTHO05D009546 1.3e-10 70.9 105 36.2
BraA02t04951Z Brassica rapa HOM05D007563 ORTHO05D009546 1.7e-10 70.5 103 35.0
Oeu013196.2 Olea europaea HOM05D007563 ORTHO05D009546 2.2e-10 70.1 132 31.8
arahy.Tifrunner.gnm1.ann1.02I6X5 Arachis hypogaea HOM05D007563 ORTHO05D009546 3.8e-10 69.3 105 35.2
BcaC03g13222 Brassica carinata HOM05D007563 ORTHO05D009546 3.8e-10 69.3 103 35.0
BolC2t06312H Brassica oleracea HOM05D007563 ORTHO05D009546 3.8e-10 69.3 103 35.0
Cre01.g041351 Chlamydomonas reinhardtii HOM05D007563 ORTHO05D009546 3.8e-10 69.3 119 33.6
EL10Ac9g22975 Beta vulgaris HOM05D007563 ORTHO05D009546 5.0e-10 68.9 104 34.6
AUR62032956 Chenopodium quinoa HOM05D007563 ORTHO05D009546 5.0e-10 68.9 104 35.6
Sabra05G0074500 Salix brachista HOM05D007563 ORTHO05D009546 2.1e-08 63.5 107 33.6
AagrBONN_evm.TU.Sc2ySwM_368.3197 Anthoceros agrestis HOM05D007563 ORTHO05D009546 1.4e-07 60.8 45 57.8
MCO14G254 Micromonas commoda HOM05D007563 ORTHO05D009546 2.3e-07 60.1 42 64.3
CiPaw.05G170900 Carya illinoinensis HOM05D007563 ORTHO05D009546 2.6e-06 56.6 87 36.8
Haze_11776 Corylus avellana HOM05D007563 ORTHO05D009546 9.8e-06 54.7 160 25.0


User provided reference genes

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