Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00006885 Prasinoderma coloniale HOM05D001547 ORTHO05D001426 3.6e-143 511.5 252 100.0
MCO10G406 Micromonas commoda HOM05D001547 ORTHO05D001426 2.7e-21 106.7 224 34.8
Eucgr.I02717 Eucalyptus grandis HOM05D001547 ORTHO05D001426 4.9e-15 85.9 223 31.4
Pp3c17_7080 Physcomitrium patens HOM05D001547 ORTHO05D001426 6.4e-15 85.5 150 36.7
Psat1g224480 Pisum sativum HOM05D001547 ORTHO05D001426 1.4e-14 84.3 172 34.9
TPR.G2154 Trifolium pratense HOM05D001547 ORTHO05D001426 2.4e-14 83.6 180 33.3
MCO13G217 Micromonas commoda HOM05D001547 ORTHO05D001426 7.1e-14 82.0 190 32.1
Gohir.D01G000500 Gossypium hirsutum HOM05D001547 ORTHO05D001426 1.2e-13 81.3 249 28.5
Gohir.D01G000600 Gossypium hirsutum HOM05D001547 ORTHO05D001426 1.2e-13 81.3 247 29.1
COL.COLO4_17877 Corchorus olitorius HOM05D001547 ORTHO05D001426 2.7e-13 80.1 156 33.3
Medtr7g113780 Medicago truncatula HOM05D001547 ORTHO05D001426 3.5e-13 79.7 161 32.3
Gorai.002G001100 Gossypium raimondii HOM05D001547 ORTHO05D001426 7.8e-13 78.6 151 34.4
Gohir.A01G000800 Gossypium hirsutum HOM05D001547 ORTHO05D001426 1.0e-12 78.2 154 33.1
Gohir.A12G032400 Gossypium hirsutum HOM05D001547 ORTHO05D001426 1.0e-12 78.2 149 34.9
Gohir.A12G032450 Gossypium hirsutum HOM05D001547 ORTHO05D001426 1.0e-12 78.2 149 34.9
CARHR080980 Cardamine hirsuta HOM05D001547 ORTHO05D001426 1.3e-12 77.8 148 33.8
Duzib248G0902 Durio zibethinus HOM05D001547 ORTHO05D001426 1.3e-12 77.8 148 34.5
PRCOL_00006595 Prasinoderma coloniale HOM05D001547 ORTHO05D001426 1.3e-12 77.8 240 29.2
Ca_00083_v3 Cicer arietinum L. HOM05D001547 ORTHO05D001426 3.0e-12 76.6 170 34.1
Duzib132G0193 Durio zibethinus HOM05D001547 ORTHO05D001426 6.6e-12 75.5 148 33.1
Gorai.008G041800 Gossypium raimondii HOM05D001547 ORTHO05D001426 6.6e-12 75.5 149 34.2
Gohir.D12G040100 Gossypium hirsutum HOM05D001547 ORTHO05D001426 8.6e-12 75.1 149 34.2
VMungo0540G2140 Vigna mungo HOM05D001547 ORTHO05D001426 8.6e-12 75.1 154 32.5
AagrBONN_evm.TU.Sc2ySwM_362.1268 Anthoceros agrestis HOM05D001547 ORTHO05D001426 1.1e-11 74.7 162 30.2
AagrBONN_evm.TU.Sc2ySwM_368.2695 Anthoceros agrestis HOM05D001547 ORTHO05D001426 1.1e-11 74.7 168 31.0
Duzib192G1022 Durio zibethinus HOM05D001547 ORTHO05D001426 1.1e-11 74.7 148 33.1
Pp3c19_1490 Physcomitrium patens HOM05D001547 ORTHO05D001426 1.1e-11 74.7 236 25.4
Mapoly0035s0020 Marchantia polymorpha HOM05D001547 ORTHO05D001426 1.5e-11 74.3 183 27.9
CBR_g924 Chara braunii HOM05D001547 ORTHO05D001426 1.9e-11 73.9 183 29.0
CAN.G1162.2 Capsicum annuum HOM05D001547 ORTHO05D001426 3.3e-11 73.2 147 33.3
Solyc01g104180.2 Solanum lycopersicum HOM05D001547 ORTHO05D001426 3.3e-11 73.2 148 31.1
PGSC0003DMG400023810 Solanum tuberosum HOM05D001547 ORTHO05D001426 3.3e-11 73.2 153 32.0
Cfa021305 Carpinus fangiana HOM05D001547 ORTHO05D001426 4.3e-11 72.8 244 27.9
SGA_v2.0_scaffold189G40371 Striga asiatica HOM05D001547 ORTHO05D001426 5.6e-11 72.4 245 28.2
Pp3c22_260 Physcomitrium patens HOM05D001547 ORTHO05D001426 7.3e-11 72.0 159 28.9
Thecc.02G039500 Theobroma cacao HOM05D001547 ORTHO05D001426 7.3e-11 72.0 144 31.9
AT3G06460 Arabidopsis thaliana HOM05D001547 ORTHO05D001426 9.5e-11 71.6 147 32.0
BNapus_Darmor_BZH_scaffold_118p00090 Brassica napus HOM05D001547 ORTHO05D001426 9.5e-11 71.6 142 34.5
BraA01t04435Z Brassica rapa HOM05D001547 ORTHO05D001426 9.5e-11 71.6 142 34.5
Phvul.006G213900 Phaseolus vulgaris HOM05D001547 ORTHO05D001426 9.5e-11 71.6 179 32.4
Carub.0003s0591 Capsella rubella HOM05D001547 ORTHO05D001426 1.2e-10 71.2 152 32.2
Lalb_Chr18g0060891 Lupinus albus HOM05D001547 ORTHO05D001426 1.2e-10 71.2 149 33.6
Nitab4.5_0003569g0010 Nicotiana tabacum HOM05D001547 ORTHO05D001426 1.2e-10 71.2 151 29.8
CiPaw.05G043600 Carya illinoinensis HOM05D001547 ORTHO05D001426 1.6e-10 70.9 248 29.4
CBR_g48498 Chara braunii HOM05D001547 ORTHO05D001426 1.6e-10 70.9 148 31.1
Thhalv10021249m.g Eutrema salsugineum HOM05D001547 ORTHO05D001426 1.6e-10 70.9 143 34.3
MD15G1421900 Malus domestica HOM05D001547 ORTHO05D001426 1.6e-10 70.9 258 27.1
Gorai.002G209600 Gossypium raimondii HOM05D001547 ORTHO05D001426 2.1e-10 70.5 251 25.9
BcaB04g21342 Brassica carinata HOM05D001547 ORTHO05D001426 2.8e-10 70.1 146 34.2
Haze_01658 Corylus avellana HOM05D001547 ORTHO05D001426 2.8e-10 70.1 244 27.5
Gohir.A01G178000 Gossypium hirsutum HOM05D001547 ORTHO05D001426 2.8e-10 70.1 251 25.9
Gohir.D01G168800 Gossypium hirsutum HOM05D001547 ORTHO05D001426 2.8e-10 70.1 251 25.9
SEGI_24337 Sequoiadendron giganteum HOM05D001547 ORTHO05D001426 2.8e-10 70.1 239 27.2
BcaC09g47901 Brassica carinata HOM05D001547 ORTHO05D001426 4.7e-10 69.3 225 28.0
BolC1t05615H Brassica oleracea HOM05D001547 ORTHO05D001426 4.7e-10 69.3 225 28.0
arahy.Tifrunner.gnm1.ann1.43BKPV Arachis hypogaea HOM05D001547 ORTHO05D001426 6.2e-10 68.9 151 31.1
SEGI_23245 Sequoiadendron giganteum HOM05D001547 ORTHO05D001426 8.1e-10 68.6 145 31.0
Pp3c16_6370 Physcomitrium patens HOM05D001547 ORTHO05D001426 1.1e-09 68.2 153 32.0
Solyc01g104280.2 Solanum lycopersicum HOM05D001547 ORTHO05D001426 1.1e-09 68.2 152 32.9
Eucgr.I02718 Eucalyptus grandis HOM05D001547 ORTHO05D001426 1.4e-09 67.8 245 26.1
FAN13G2562 Fragaria x ananassa HOM05D001547 ORTHO05D001426 1.4e-09 67.8 259 27.0
Nitab4.5_0000056g0170 Nicotiana tabacum HOM05D001547 ORTHO05D001426 1.4e-09 67.8 154 27.3
SMO200G0059 Selaginella moellendorffii HOM05D001547 ORTHO05D001426 1.4e-09 67.8 218 27.1
THA.LOC104802715 Tarenaya hassleriana HOM05D001547 ORTHO05D001426 1.4e-09 67.8 143 32.2
AL3G17480 Arabidopsis lyrata HOM05D001547 ORTHO05D001426 1.8e-09 67.4 147 32.7
MELO3C034909.2 Cucumis melo HOM05D001547 ORTHO05D001426 1.8e-09 67.4 150 32.0
Atru.chr6.847 Acer truncatum HOM05D001547 ORTHO05D001426 2.3e-09 67.0 165 30.9
Sopen01g046720 Solanum pennellii HOM05D001547 ORTHO05D001426 2.3e-09 67.0 152 32.2
TWI14G0011 Tripterygium wilfordii HOM05D001547 ORTHO05D001426 2.3e-09 67.0 145 31.7
Actinidia00209 Actinidia chinensis HOM05D004517 ORTHO05D005366 3.1e-09 66.6 229 27.1
AagrBONN_evm.TU.Sc2ySwM_344.3253 Anthoceros agrestis HOM05D001547 ORTHO05D001426 3.1e-09 66.6 170 30.6
arahy.Tifrunner.gnm1.ann1.FQ4RXM Arachis hypogaea HOM05D001547 ORTHO05D001426 3.1e-09 66.6 95 37.9
ClCG09G014320 Citrullus lanatus HOM05D001547 ORTHO05D001426 3.1e-09 66.6 148 29.7
Phvul.006G213700 Phaseolus vulgaris HOM05D001547 ORTHO05D001426 3.1e-09 66.6 144 30.6
AT3G06470 Arabidopsis thaliana HOM05D001547 ORTHO05D001426 4.0e-09 66.2 262 26.0
Thhalv10021309m.g Eutrema salsugineum HOM05D001547 ORTHO05D001426 4.0e-09 66.2 234 26.5
Sed0010217 Sechium edule HOM05D001547 ORTHO05D001426 4.0e-09 66.2 155 31.6
Sed0026506 Sechium edule HOM05D001547 ORTHO05D001426 4.0e-09 66.2 151 31.1
unitig_26.g9019 Utricularia gibba HOM05D001547 ORTHO05D001426 4.0e-09 66.2 167 28.7
Cpa.g.sc113.68 Carica papaya HOM05D001547 ORTHO05D001426 5.2e-09 65.9 166 27.7
PSO170G2757 Papaver somniferum HOM05D001547 ORTHO05D001426 5.2e-09 65.9 161 31.7
TWI59G0314 Tripterygium wilfordii HOM05D001547 ORTHO05D001426 5.2e-09 65.9 145 31.7
BcaB04g21341 Brassica carinata HOM05D001547 ORTHO05D001426 6.8e-09 65.5 147 31.3
AUR62017321 Chenopodium quinoa HOM05D001547 ORTHO05D001426 6.8e-09 65.5 222 27.9
COL.COLO4_17876 Corchorus olitorius HOM05D001547 ORTHO05D001426 6.8e-09 65.5 150 30.7
MD08G1227900 Malus domestica HOM05D001547 ORTHO05D001426 6.8e-09 65.5 150 30.7
PGR142G4445 Punica granatum HOM05D001547 ORTHO05D001426 6.8e-09 65.5 229 27.9
Thecc.02G039400 Theobroma cacao HOM05D001547 ORTHO05D001426 6.8e-09 65.5 144 31.2
Atru.chr6.852 Acer truncatum HOM05D001547 ORTHO05D001426 8.9e-09 65.1 155 31.6
Atru.chr6.856 Acer truncatum HOM05D001547 ORTHO05D001426 8.9e-09 65.1 155 31.6
FvH4_5g29630 Fragaria vesca HOM05D001547 ORTHO05D001426 8.9e-09 65.1 254 26.8
Manes.07G015000 Manihot esculenta HOM05D001547 ORTHO05D001426 8.9e-09 65.1 223 26.9
RcHm_v2.0_Chr7g0222681 Rosa chinensis HOM05D001547 ORTHO05D001426 8.9e-09 65.1 255 26.3
PGSC0003DMG400023788 Solanum tuberosum HOM05D001547 ORTHO05D001426 8.9e-09 65.1 152 30.9
Aa31LG5G17000 Aethionema arabicum HOM05D001547 ORTHO05D001426 1.2e-08 64.7 143 32.2
AL3G17490 Arabidopsis lyrata HOM05D001547 ORTHO05D001426 1.2e-08 64.7 148 31.1
BcaC09g47902 Brassica carinata HOM05D001547 ORTHO05D001426 1.2e-08 64.7 147 32.0
BolC1t05614H Brassica oleracea HOM05D001547 ORTHO05D001426 1.2e-08 64.7 147 32.0
Glyma.08G185600 Glycine max HOM05D001547 ORTHO05D001426 1.2e-08 64.7 145 30.3
Prupe.1G567000 Prunus persica HOM05D001547 ORTHO05D001426 1.2e-08 64.7 150 30.7
Prupe.1G567100 Prunus persica HOM05D001547 ORTHO05D001426 1.2e-08 64.7 159 28.9
Sp3g05410 Schrenkiella parvula HOM05D001547 ORTHO05D001426 1.2e-08 64.7 151 31.1
Solyc07g018250.1 Solanum lycopersicum HOM05D001547 ORTHO05D001426 1.2e-08 64.7 148 29.7
BcaC09g47903 Brassica carinata HOM05D001547 ORTHO05D001426 1.5e-08 64.3 142 31.7
BolC1t05612H Brassica oleracea HOM05D001547 ORTHO05D001426 1.5e-08 64.3 142 31.7
Peaxi162Scf00003g03828 Petunia axillaris HOM05D001547 ORTHO05D001426 1.5e-08 64.3 95 37.9
CAN.G1577.10 Capsicum annuum HOM05D001547 ORTHO05D001426 2.0e-08 63.9 153 31.4
CARHR081000 Cardamine hirsuta HOM05D001547 ORTHO05D001426 2.0e-08 63.9 150 33.3
FAN18G1132 Fragaria x ananassa HOM05D001547 ORTHO05D001426 2.0e-08 63.9 254 26.8
Potri.003G019800 Populus trichocarpa HOM05D001547 ORTHO05D001426 2.0e-08 63.9 168 31.5
SHI25657 Sapria himalayana HOM05D001547 ORTHO05D001426 2.0e-08 63.9 222 26.1
Sed0009207 Sechium edule HOM05D001547 ORTHO05D001426 2.0e-08 63.9 157 30.6
PGSC0003DMG400012742 Solanum tuberosum HOM05D001547 ORTHO05D001426 2.0e-08 63.9 146 30.1
C03p42160 Brassica napus HOM05D001547 ORTHO05D001426 2.6e-08 63.5 152 32.9
Duzib052G0983 Durio zibethinus HOM05D001547 ORTHO05D001426 2.6e-08 63.5 156 32.7
FAN08G2307 Fragaria x ananassa HOM05D001547 ORTHO05D001426 2.6e-08 63.5 165 30.9
Gohir.A01G000900 Gossypium hirsutum HOM05D001547 ORTHO05D001426 2.6e-08 63.5 104 36.5
MD15G1421700 Malus domestica HOM05D001547 ORTHO05D001426 2.6e-08 63.5 151 30.5
Nn5g28160 Nelumbo nucifera HOM05D001547 ORTHO05D001426 2.6e-08 63.5 145 32.4
MSTRG.16526 Avicennia marina HOM05D001547 ORTHO05D001426 3.4e-08 63.2 250 26.0
BcaC09g47898 Brassica carinata HOM05D001547 ORTHO05D001426 3.4e-08 63.2 146 31.5
BolC1t05619H Brassica oleracea HOM05D001547 ORTHO05D001426 3.4e-08 63.2 146 31.5
ClCG09G014360 Citrullus lanatus HOM05D001547 ORTHO05D001426 3.4e-08 63.2 151 31.1
MELO3C014378.2 Cucumis melo HOM05D001547 ORTHO05D001426 3.4e-08 63.2 150 30.0
CsaV3_6G037390 Cucumis sativus L. HOM05D001547 ORTHO05D001426 3.4e-08 63.2 150 30.0
Mapoly0049s0025 Marchantia polymorpha HOM05D001547 ORTHO05D001426 3.4e-08 63.2 151 25.8
Potri.003G019700 Populus trichocarpa HOM05D001547 ORTHO05D001426 3.4e-08 63.2 159 28.9
Solyc10g046810.1 Solanum lycopersicum HOM05D001547 ORTHO05D001426 3.4e-08 63.2 99 40.4
BcaC05g29820 Brassica carinata HOM05D001547 ORTHO05D001426 4.4e-08 62.8 143 31.5
BcaC05g30022 Brassica carinata HOM05D001547 ORTHO05D001426 4.4e-08 62.8 143 32.2
A03p34690 Brassica napus HOM05D001547 ORTHO05D001426 4.4e-08 62.8 147 33.3
BolC3t16497H Brassica oleracea HOM05D001547 ORTHO05D001426 4.4e-08 62.8 147 33.3
BolC5t34735H Brassica oleracea HOM05D001547 ORTHO05D001426 4.4e-08 62.8 143 31.5
BraA03t12647Z Brassica rapa HOM05D001547 ORTHO05D001426 4.4e-08 62.8 147 33.3
Lj6g0015272 Lotus japonicus HOM05D001547 ORTHO05D001426 4.4e-08 62.8 152 30.9
Sp3g05400 Schrenkiella parvula HOM05D001547 ORTHO05D001426 4.4e-08 62.8 144 31.2
Solyc10g046830.2 Solanum lycopersicum HOM05D001547 ORTHO05D001426 4.4e-08 62.8 141 31.2
BcaB04g21340 Brassica carinata HOM05D001547 ORTHO05D001426 5.8e-08 62.4 143 32.2
A05p41550 Brassica napus HOM05D001547 ORTHO05D001426 5.8e-08 62.4 143 31.5
C05p60750 Brassica napus HOM05D001547 ORTHO05D001426 5.8e-08 62.4 143 31.5
MELO3C014376.2 Cucumis melo HOM05D001547 ORTHO05D001426 5.8e-08 62.4 152 31.6
Manes.10G130500 Manihot esculenta HOM05D001547 ORTHO05D001426 5.8e-08 62.4 146 30.1
BcaC09g47900 Brassica carinata HOM05D001547 ORTHO05D001426 7.6e-08 62.0 145 31.0
BNapus_Darmor_BZH_scaffold_118p00100 Brassica napus HOM05D001547 ORTHO05D001426 7.6e-08 62.0 145 31.0
BraA01t04436Z Brassica rapa HOM05D001547 ORTHO05D001426 7.6e-08 62.0 145 31.0
Carub.0003s0592 Capsella rubella HOM05D001547 ORTHO05D001426 7.6e-08 62.0 142 32.4
Manes.10G130400 Manihot esculenta HOM05D001547 ORTHO05D001426 7.6e-08 62.0 145 31.0
Nitab4.5_0002245g0070 Nicotiana tabacum HOM05D001547 ORTHO05D001426 7.6e-08 62.0 149 30.2
BraA05t22876Z Brassica rapa HOM05D001547 ORTHO05D001426 9.9e-08 61.6 143 31.5
Aqoxy6G00162 Aquilegia oxysepala HOM05D001547 ORTHO05D001426 1.3e-07 61.2 152 30.9
Oeu025685.1 Olea europaea HOM05D001547 ORTHO05D001426 1.3e-07 61.2 226 27.0
BolC1t05618H Brassica oleracea HOM05D001547 ORTHO05D001426 1.7e-07 60.8 145 31.0
QL11p000281 Quercus lobata HOM05D001547 ORTHO05D001426 1.7e-07 60.8 153 32.0
HanXRQChr10g0290401 Helianthus annuus HOM05D001547 ORTHO05D001426 2.2e-07 60.5 148 28.4
Lsat_1_v5_gn_5_109420 Lactuca sativa HOM05D001547 ORTHO05D001426 2.2e-07 60.5 147 28.6
RcHm_v2.0_Chr7g0222701 Rosa chinensis HOM05D001547 ORTHO05D001426 2.2e-07 60.5 149 30.9
CsaV3_6G037400 Cucumis sativus L. HOM05D001547 ORTHO05D001426 2.9e-07 60.1 152 30.3
FAN08G2472 Fragaria x ananassa HOM05D001547 ORTHO05D001426 3.7e-07 59.7 149 30.9
Mapoly0121s0029 Marchantia polymorpha HOM05D001547 ORTHO05D001426 3.7e-07 59.7 149 30.2
Nn1g08694 Nelumbo nucifera HOM05D001547 ORTHO05D001426 3.7e-07 59.7 165 30.3
vmacro01765 Vaccinium macrocarpon HOM05D000102 ORTHO05D003793 3.7e-07 59.7 165 27.9
PRCOL_00003814 Prasinoderma coloniale HOM05D001547 ORTHO05D001426 4.9e-07 59.3 152 32.9
ClCG09G014390 Citrullus lanatus HOM05D001547 ORTHO05D001426 6.4e-07 58.9 152 30.3
FAN13G0032 Fragaria x ananassa HOM05D001547 ORTHO05D001426 8.3e-07 58.5 149 30.2
FAN18G2067 Fragaria x ananassa HOM05D001547 ORTHO05D001426 8.3e-07 58.5 149 30.2
MBI03_g33019_MAGBIO Magnolia biondii HOM05D001547 ORTHO05D001426 8.3e-07 58.5 239 27.2
CANSAT11G1701 Cannabis sativa HOM05D001547 ORTHO05D001426 1.1e-06 58.2 141 30.5
Lj6g0003855 Lotus japonicus HOM05D001547 ORTHO05D001426 1.9e-06 57.4 147 32.0
AagrBONN_evm.TU.Sc2ySwM_344.4991 Anthoceros agrestis HOM05D001547 ORTHO05D001426 3.2e-06 56.6 143 30.1
Cc02_g22410 Coffea canephora HOM05D001547 ORTHO05D001426 3.2e-06 56.6 259 26.6
TWI14G1183 Tripterygium wilfordii HOM05D001547 ORTHO05D001426 4.1e-06 56.2 166 27.7
Haze_01653 Corylus avellana HOM05D000102 ORTHO05D001426 5.4e-06 55.8 147 29.3
Nitab4.5_0001706g0030 Nicotiana tabacum HOM05D001547 ORTHO05D001426 7.1e-06 55.5 76 34.2


User provided reference genes

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