Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 1.6e-51 205.7 97 100.0
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 1.3e-24 116.3 95 53.7
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 8.4e-24 113.6 97 51.5
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 1.1e-23 113.2 90 55.6
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 3.2e-23 111.7 90 55.6
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 5.5e-23 110.9 97 52.6
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 7.1e-23 110.5 97 50.5
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 7.1e-23 110.5 97 51.5
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 7.1e-23 110.5 97 50.5
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 7.1e-23 110.5 97 51.5
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 9.3e-23 110.2 97 50.5
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 9.3e-23 110.2 97 50.5
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 9.3e-23 110.2 97 50.5
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 1.2e-22 109.8 97 51.5
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 1.2e-22 109.8 97 50.5
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 1.6e-22 109.4 97 50.5
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 1.6e-22 109.4 88 54.5
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 1.6e-22 109.4 95 52.6
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 1.6e-22 109.4 97 49.5
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 2.1e-22 109.0 97 50.5
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 2.1e-22 109.0 97 49.5
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 2.7e-22 108.6 97 50.5
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 2.7e-22 108.6 95 52.6
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 2.7e-22 108.6 89 55.1
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 2.7e-22 108.6 89 55.1
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 2.7e-22 108.6 97 49.5
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 3.5e-22 108.2 89 55.1
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 3.5e-22 108.2 97 52.6
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 3.5e-22 108.2 97 51.5
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 3.5e-22 108.2 95 53.7
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 3.5e-22 108.2 89 55.1
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 3.5e-22 108.2 97 51.5
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 4.6e-22 107.8 97 50.5
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 4.6e-22 107.8 97 51.5
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 4.6e-22 107.8 89 53.9
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 4.6e-22 107.8 97 49.5
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 6.0e-22 107.5 97 50.5
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 7.9e-22 107.1 95 53.7
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 7.9e-22 107.1 89 52.8
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 1.0e-21 106.7 97 50.5
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 1.0e-21 106.7 89 52.8
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 1.0e-21 106.7 97 51.5
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 1.0e-21 106.7 97 49.5
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 1.3e-21 106.3 97 49.5
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 1.8e-21 105.9 93 51.6
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 1.8e-21 105.9 97 47.4
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 1.8e-21 105.9 89 52.8
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.8e-21 105.9 86 52.3
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.8e-21 105.9 86 52.3
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 1.8e-21 105.9 97 50.5
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 1.8e-21 105.9 84 54.8
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 2.3e-21 105.5 93 50.5
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 2.3e-21 105.5 93 51.6
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 3.9e-21 104.8 95 52.6
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 3.9e-21 104.8 85 55.3
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 3.9e-21 104.8 83 55.4
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 3.9e-21 104.8 90 53.3
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 5.1e-21 104.4 90 48.9
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 5.1e-21 104.4 95 51.6
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 5.1e-21 104.4 95 51.6
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 5.1e-21 104.4 93 51.6
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 8.7e-21 103.6 97 48.5
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 8.7e-21 103.6 95 50.5
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 8.7e-21 103.6 95 51.6
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 8.7e-21 103.6 97 48.5
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 1.1e-20 103.2 97 49.5
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 1.1e-20 103.2 96 51.0
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 1.1e-20 103.2 95 51.6
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 1.1e-20 103.2 90 48.9
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 1.1e-20 103.2 91 50.5
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 1.1e-20 103.2 95 48.4
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 1.1e-20 103.2 89 52.8
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 1.1e-20 103.2 88 52.3
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 1.5e-20 102.8 97 49.5
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 1.5e-20 102.8 90 48.9
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 1.5e-20 102.8 95 49.5
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 1.9e-20 102.4 93 50.5
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 1.9e-20 102.4 95 48.4
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 1.9e-20 102.4 90 52.2
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 2.5e-20 102.1 93 47.3
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 2.5e-20 102.1 88 53.4
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 3.3e-20 101.7 88 53.4
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 3.3e-20 101.7 93 50.5
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 3.3e-20 101.7 95 47.4
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 3.3e-20 101.7 86 51.2
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 3.3e-20 101.7 88 50.0
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 3.3e-20 101.7 91 49.5
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 3.3e-20 101.7 85 51.8
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 4.3e-20 101.3 95 51.6
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 5.6e-20 100.9 97 49.5
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 5.6e-20 100.9 95 50.5
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 5.6e-20 100.9 88 52.3
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 5.6e-20 100.9 95 50.5
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 5.6e-20 100.9 82 53.7
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 7.4e-20 100.5 95 48.4
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 7.4e-20 100.5 95 48.4
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 7.4e-20 100.5 95 51.6
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 1.3e-19 99.8 95 48.4
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 1.3e-19 99.8 95 50.5
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 1.6e-19 99.4 95 50.5
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.6e-19 99.4 95 50.5
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 1.6e-19 99.4 90 46.7
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 1.6e-19 99.4 101 50.5
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 2.8e-19 98.6 95 49.5
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 2.8e-19 98.6 95 49.5
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 2.8e-19 98.6 83 54.2
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 4.8e-19 97.8 81 53.1
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 1.4e-18 96.3 97 50.5
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 2.4e-18 95.5 91 48.4
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 5.3e-18 94.4 91 48.4
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 1.5e-17 92.8 73 53.4
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 7.6e-17 90.5 123 39.0
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 8.4e-16 87.0 66 56.1
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 1.1e-15 86.7 122 39.3
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 3.2e-15 85.1 116 39.7
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 4.2e-15 84.7 87 43.7
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 1.6e-14 82.8 142 35.2
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 4.6e-14 81.3 70 51.4
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 8.7e-13 77.0 97 43.3
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 2.8e-11 72.0 51 62.7
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 6.3e-11 70.9 59 55.9
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 1.1e-10 70.1 53 56.6
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 1.4e-10 69.7 53 58.5
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 2.4e-10 68.9 52 57.7
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 3.1e-10 68.6 56 51.8
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 4.1e-10 68.2 53 50.9
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 6.9e-10 67.4 51 58.8


User provided reference genes

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