Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00006487 Prasinoderma coloniale HOM05D001496 ORTHO05D007453 0.0e+00 1181.8 686 100.0
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 1.1e-83 315.5 407 45.7
Pp3c10_8510 Physcomitrium patens HOM05D001496 ORTHO05D007453 6.9e-83 312.8 389 47.8
Lj1g0019023 Lotus japonicus HOM05D001496 ORTHO05D007453 1.2e-82 312.0 411 46.5
Ca_09147_v3 Cicer arietinum L. HOM05D001496 ORTHO05D007453 9.9e-82 308.9 391 45.5
TPR.G9626 Trifolium pratense HOM05D001496 ORTHO05D007453 2.2e-81 307.8 391 45.0
Lalb_Chr04g0259811 Lupinus albus HOM05D001496 ORTHO05D007453 2.9e-81 307.4 390 47.2
Medtr7g108620 Medicago truncatula HOM05D001496 ORTHO05D007453 4.9e-81 306.6 391 45.0
Duzib133G1333 Durio zibethinus HOM05D001496 ORTHO05D007453 6.4e-81 306.2 389 45.5
Psat3g022520 Pisum sativum HOM05D001496 ORTHO05D007453 6.4e-81 306.2 391 45.3
Hund16196 Selenicereus undatus HOM05D001496 ORTHO05D007453 1.4e-80 305.1 378 46.3
Sc10g0000910 Simmondsia chinensis HOM05D001496 ORTHO05D007453 3.2e-80 303.9 386 45.9
arahy.Tifrunner.gnm1.ann1.RVL32D Arachis hypogaea HOM05D001496 ORTHO05D007453 4.2e-80 303.5 383 46.0
CAN.G339.32 Capsicum annuum HOM05D001496 ORTHO05D007453 7.1e-80 302.8 380 47.4
Nitab4.5_0005474g0020 Nicotiana tabacum HOM05D001496 ORTHO05D007453 7.1e-80 302.8 419 44.4
Aqoxy2G02984 Aquilegia oxysepala HOM05D001496 ORTHO05D007453 9.3e-80 302.4 392 45.2
Manes.05G064100 Manihot esculenta HOM05D001496 ORTHO05D007453 9.3e-80 302.4 399 45.6
Mapoly0077s0004 Marchantia polymorpha HOM05D001496 ORTHO05D007453 9.3e-80 302.4 370 46.5
Aa31LG1G29100 Aethionema arabicum HOM05D001496 ORTHO05D007453 1.2e-79 302.0 389 46.0
MCO05G420 Micromonas commoda HOM05D001496 ORTHO05D007453 1.2e-79 302.0 376 48.4
Sp4g29690 Schrenkiella parvula HOM05D001496 ORTHO05D007453 1.2e-79 302.0 395 46.1
arahy.Tifrunner.gnm1.ann1.D4F8D3 Arachis hypogaea HOM05D001496 ORTHO05D007453 1.6e-79 301.6 383 46.0
Ciclev10020260m.g Citrus clementina HOM05D001496 ORTHO05D007453 1.6e-79 301.6 378 46.6
Atru.chr5.1181 Acer truncatum HOM05D001496 ORTHO05D007453 2.1e-79 301.2 381 45.1
PSO170G1216 Papaver somniferum HOM05D001496 ORTHO05D007453 2.1e-79 301.2 402 45.8
TAR365G0358 Trochodendron aralioides HOM05D001496 ORTHO05D007453 2.1e-79 301.2 389 46.5
AT2G47760 Arabidopsis thaliana HOM05D001496 ORTHO05D007453 3.5e-79 300.4 381 46.5
Cc01_g20650 Coffea canephora HOM05D001496 ORTHO05D007453 3.5e-79 300.4 386 47.2
Potri.014G131600 Populus trichocarpa HOM05D001496 ORTHO05D007453 3.5e-79 300.4 376 45.7
Zm00001eb122900 Zea mays HOM05D001496 ORTHO05D007453 4.6e-79 300.1 391 45.8
Glyma.19G210000 Glycine max HOM05D001496 ORTHO05D007453 6.0e-79 299.7 392 44.9
Thecc.01G297200 Theobroma cacao HOM05D001496 ORTHO05D007453 6.0e-79 299.7 389 44.2
EL10Ac2g04497 Beta vulgaris HOM05D001496 ORTHO05D007453 7.9e-79 299.3 385 44.9
Migut.D00196 Erythranthe guttata HOM05D001496 ORTHO05D007453 1.0e-78 298.9 419 44.2
Lalb_Chr04g0259801 Lupinus albus HOM05D001496 ORTHO05D007453 1.0e-78 298.9 401 45.9
Solyc09g074900.4 Solanum lycopersicum HOM05D001496 ORTHO05D007453 1.0e-78 298.9 407 45.0
Cpa.g.sc9.209 Carica papaya HOM05D001496 ORTHO05D007453 1.3e-78 298.5 386 44.8
TWI14G0104 Tripterygium wilfordii HOM05D001496 ORTHO05D007453 1.3e-78 298.5 381 45.7
CSS0045492 Camellia sinensis var. sinensis HOM05D001496 ORTHO05D007453 2.3e-78 297.7 383 45.4
Carub.0004s3047 Capsella rubella HOM05D001496 ORTHO05D007453 2.3e-78 297.7 382 46.1
Eucgr.H01160 Eucalyptus grandis HOM05D001496 ORTHO05D007453 2.3e-78 297.7 389 44.5
FAN24G2787 Fragaria x ananassa HOM05D001496 ORTHO05D007453 2.3e-78 297.7 392 44.1
GSVIVG01027976001 Vitis vinifera HOM05D001496 ORTHO05D007453 2.3e-78 297.7 415 43.6
Rhsim13G0012500 Rhododendron simsii HOM05D001496 ORTHO05D007453 3.0e-78 297.4 389 45.2
CDE02G4632 Ceratophyllum demersum HOM05D001496 ORTHO05D007453 5.1e-78 296.6 411 43.3
Glyma.03G213200 Glycine max HOM05D001496 ORTHO05D007453 5.1e-78 296.6 445 42.7
MD11G1304600 Malus domestica HOM05D001496 ORTHO05D007453 6.7e-78 296.2 408 44.1
PGSC0003DMG400011393 Solanum tuberosum HOM05D001496 ORTHO05D007453 6.7e-78 296.2 405 44.7
MELO3C016018.2 Cucumis melo HOM05D001496 ORTHO05D007453 1.1e-77 295.4 389 45.5
FAN15G3342 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.1e-77 295.4 379 45.4
HanXRQChr12g0382731 Helianthus annuus HOM05D001496 ORTHO05D007453 1.1e-77 295.4 389 45.2
THA.LOC104802172 Tarenaya hassleriana HOM05D001496 ORTHO05D007453 1.1e-77 295.4 387 46.5
Actinidia24335 Actinidia chinensis HOM05D001496 ORTHO05D007453 1.9e-77 294.7 388 45.6
AUR62023205 Chenopodium quinoa HOM05D001496 ORTHO05D007453 1.9e-77 294.7 384 45.1
AUR62023251 Chenopodium quinoa HOM05D001496 ORTHO05D007453 1.9e-77 294.7 394 44.2
SalBow3G1333 Salvia bowleyana HOM05D001496 ORTHO05D007453 2.5e-77 294.3 389 45.2
Sopen09g029720 Solanum pennellii HOM05D001496 ORTHO05D007453 2.5e-77 294.3 407 44.5
Dinv19717 Davidia involucrata HOM05D001496 ORTHO05D007453 3.3e-77 293.9 360 46.1
AL4G47330 Arabidopsis lyrata HOM05D001496 ORTHO05D007453 4.3e-77 293.5 390 45.1
BcaB02g08748 Brassica carinata HOM05D001496 ORTHO05D007453 4.3e-77 293.5 383 45.7
Gorai.008G011100 Gossypium raimondii HOM05D001496 ORTHO05D007453 7.4e-77 292.7 392 44.9
Sabra14G0097800 Salix brachista HOM05D001496 ORTHO05D007453 7.4e-77 292.7 376 45.2
RcHm_v2.0_Chr6g0293561 Rosa chinensis HOM05D001496 ORTHO05D007453 1.6e-76 291.6 374 44.4
unitig_0.g1180 Utricularia gibba HOM05D001496 ORTHO05D007453 1.6e-76 291.6 381 44.4
CANSAT25G1124 Cannabis sativa HOM05D001496 ORTHO05D007453 2.1e-76 291.2 379 45.1
Thhalv10001458m.g Eutrema salsugineum HOM05D001496 ORTHO05D007453 2.8e-76 290.8 374 46.0
Gohir.A12G010700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 2.8e-76 290.8 391 44.2
ECA248G3024 Erigeron canadensis HOM05D001496 ORTHO05D007453 3.7e-76 290.4 381 45.7
Gohir.D12G011100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 4.8e-76 290.0 392 44.6
HPP92_016896 Vanilla planifolia HOM05D001496 ORTHO05D007453 4.8e-76 290.0 384 45.6
vmacro02468 Vaccinium macrocarpon HOM05D001496 ORTHO05D007453 8.1e-76 289.3 389 44.7
CsaV3_7G029100 Cucumis sativus L. HOM05D001496 ORTHO05D007453 1.8e-75 288.1 389 45.2
Lsat_1_v5_gn_5_190521 Lactuca sativa HOM05D001496 ORTHO05D007453 2.4e-75 287.7 384 46.4
A05p00200 Brassica napus HOM05D001496 ORTHO05D007453 3.1e-75 287.3 420 43.8
AagrBONN_evm.TU.Sc2ySwM_368.922 Anthoceros agrestis HOM05D001496 ORTHO05D007453 2.0e-74 284.6 393 44.3
SMO111G0159 Selaginella moellendorffii HOM05D001496 ORTHO05D007453 2.6e-74 284.3 364 46.7
ATR0796G343 Amborella trichopoda HOM05D001496 ORTHO05D007453 5.8e-74 283.1 361 45.4
Cfa005950 Carpinus fangiana HOM05D001496 ORTHO05D007453 5.8e-74 283.1 370 43.2
Hma1.2p1_0209F.1_g088590 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 7.6e-74 282.7 408 42.6
Sed0004349 Sechium edule HOM05D001496 ORTHO05D007453 1.0e-73 282.3 369 45.0
Lj2C1190T13 Lonicera japonica HOM05D001496 ORTHO05D007453 4.9e-73 280.0 381 42.5
BcaC02g12544 Brassica carinata HOM05D001496 ORTHO05D007453 6.5e-73 279.6 383 44.9
Phvul.001G205800 Phaseolus vulgaris HOM05D001496 ORTHO05D007453 1.1e-72 278.9 352 46.9
C04p00120 Brassica napus HOM05D001496 ORTHO05D007453 2.5e-72 277.7 388 45.4
ClCG09G006040 Citrullus lanatus HOM05D001496 ORTHO05D007453 2.5e-72 277.7 400 43.0
Prupe.8G258400 Prunus persica HOM05D001496 ORTHO05D007453 2.5e-72 277.7 397 43.6
Haze_04897 Corylus avellana HOM05D001496 ORTHO05D007453 1.6e-71 275.0 414 41.3
DCAR_002814 Daucus carota HOM05D001496 ORTHO05D007453 3.5e-71 273.9 389 43.4
Peaxi162Scf00067g02528 Petunia axillaris HOM05D001496 ORTHO05D007453 3.5e-71 273.9 380 43.7
Nitab4.5_0000619g0030 Nicotiana tabacum HOM05D001496 ORTHO05D007453 6.0e-71 273.1 429 41.0
COL.COLO4_23374 Corchorus olitorius HOM05D001496 ORTHO05D007453 3.0e-70 270.8 343 46.1
TAR633G2480 Trochodendron aralioides HOM05D001496 ORTHO05D007453 6.7e-70 269.6 340 47.1
Nn7g38144 Nelumbo nucifera HOM05D001496 ORTHO05D007453 8.7e-70 269.2 373 44.0
CiPaw.07G106500 Carya illinoinensis HOM05D001496 ORTHO05D007453 1.1e-69 268.9 377 42.7
Oeu048346.1 Olea europaea HOM05D001496 ORTHO05D007453 1.6e-68 265.0 481 37.8
QL12p027136 Quercus lobata HOM05D001496 ORTHO05D007453 2.2e-65 254.6 329 45.6
PGR119G0252 Punica granatum HOM05D001496 ORTHO05D007453 1.3e-62 245.4 388 40.5
PGR119G1256 Punica granatum HOM05D001496 ORTHO05D007453 1.3e-62 245.4 388 40.5
BraA05t19016Z Brassica rapa HOM05D001496 ORTHO05D007453 1.3e-57 228.8 291 47.4
Haze_26252 Corylus avellana HOM05D001496 ORTHO05D007453 1.9e-56 224.9 376 37.5
CARHR143130 Cardamine hirsuta HOM05D001496 ORTHO05D007453 4.6e-55 220.3 306 44.8
FvH4_2g25370 Fragaria vesca HOM05D001496 ORTHO05D007453 1.4e-54 218.8 303 42.9
SGA_v2.0_scaffold1G00377 Striga asiatica HOM05D000802 ORTHO05D001074 1.1e-51 209.1 374 39.0
HPP92_016892 Vanilla planifolia HOM05D001496 ORTHO05D007453 5.9e-50 203.4 282 44.3
Hma1.2p1_0209F.1_g088600 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 1.4e-48 198.7 408 34.3
Ah.16g101380 Amaranthus hybridus HOM05D001496 ORTHO05D007453 4.2e-48 197.2 267 43.8
TAR633G0725 Trochodendron aralioides HOM05D001496 ORTHO05D007453 3.3e-45 187.6 248 46.8
FAN15G0073 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.7e-36 158.7 190 48.4
MD03G1285200 Malus domestica HOM05D001496 ORTHO05D007453 2.0e-34 151.8 194 46.9
FAN20G0671 Fragaria x ananassa HOM05D001496 ORTHO05D007453 8.5e-33 146.4 179 46.4
MD03G1285100 Malus domestica HOM05D001496 ORTHO05D007453 1.4e-30 139.0 197 42.6
Gohir.A05G239300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 6.5e-25 120.2 132 47.0
Os01g0172000 Oryza sativa ssp. japonica HOM05D001496 ORTHO05D007453 2.6e-21 108.2 113 50.4
COL.COLO4_15168 Corchorus olitorius HOM05D001496 ORTHO05D007453 5.7e-21 107.1 116 49.1
Gohir.A01G111300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 2.2e-20 105.1 116 45.7
Gohir.A02G071100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.8e-19 102.1 116 44.8
COL.COLO4_05649 Corchorus olitorius HOM05D001496 ORTHO05D007453 3.1e-19 101.3 117 46.2
Gohir.A12G153600 Gossypium hirsutum HOM05D001496 ORTHO05D007453 7.0e-19 100.1 116 44.0
Gohir.A07G160700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 8.0e-15 86.7 84 51.2
A03p26050 Brassica napus HOM05D000073 ORTHO05D000033 2.0e-13 82.0 72 51.4
BraA03t11820Z Brassica rapa HOM05D001496 ORTHO05D007453 2.0e-13 82.0 72 51.4
MBI19_g29447_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 5.7e-13 80.5 75 50.7
SEGI_31251 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 1.7e-12 79.0 74 50.0
MBI14_g09685_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 6.4e-12 77.0 102 41.2
QL02p058842 Quercus lobata HOM05D001496 ORTHO05D000125 6.2e-07 60.5 43 60.5


User provided reference genes

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