Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00006445 Prasinoderma coloniale HOM05D006883 ORTHO05D008624 1.2e-227 792.7 388 100.0
Mapoly0058s0049 Marchantia polymorpha HOM05D006883 ORTHO05D008624 2.3e-80 303.5 343 46.6
Pp3c7_3620 Physcomitrium patens HOM05D006883 ORTHO05D008624 2.0e-76 290.4 329 46.5
Peaxi162Scf00386g00096 Petunia axillaris HOM05D006883 ORTHO05D008624 6.5e-75 285.4 348 44.5
Psat1g187280 Pisum sativum HOM05D006883 ORTHO05D008624 1.9e-74 283.9 332 44.0
AagrBONN_evm.TU.Sc2ySwM_369.460 Anthoceros agrestis HOM05D006883 ORTHO05D008624 5.5e-74 282.3 362 43.4
Lalb_Chr15g0087031 Lupinus albus HOM05D006883 ORTHO05D008624 7.1e-74 282.0 357 42.9
CsaV3_3G014130 Cucumis sativus L. HOM05D006883 ORTHO05D008624 9.3e-74 281.6 341 43.4
Eucgr.H03771 Eucalyptus grandis HOM05D006883 ORTHO05D008624 9.3e-74 281.6 357 43.4
LjContig00389g0025618 Lotus japonicus HOM05D006883 ORTHO05D008624 9.3e-74 281.6 348 42.8
CAN.G556.8 Capsicum annuum HOM05D006883 ORTHO05D008624 1.2e-73 281.2 348 43.1
COL.COLO4_13924 Corchorus olitorius HOM05D006883 ORTHO05D008624 1.2e-73 281.2 333 42.9
Potri.008G204900 Populus trichocarpa HOM05D006883 ORTHO05D008624 1.2e-73 281.2 337 44.8
Haze_01264 Corylus avellana HOM05D006883 ORTHO05D008624 2.1e-73 280.4 337 43.6
Lalb_Chr18g0055701 Lupinus albus HOM05D006883 ORTHO05D008624 2.1e-73 280.4 337 43.9
Sed0024317 Sechium edule HOM05D006883 ORTHO05D008624 2.1e-73 280.4 348 43.4
Gohir.A10G101275 Gossypium hirsutum HOM05D006883 ORTHO05D008624 2.7e-73 280.0 348 43.4
Sopen01g029090 Solanum pennellii HOM05D006883 ORTHO05D008624 2.7e-73 280.0 348 43.7
PGSC0003DMG400022678 Solanum tuberosum HOM05D006883 ORTHO05D008624 2.7e-73 280.0 348 43.7
Nitab4.5_0000829g0010 Nicotiana tabacum HOM05D006883 ORTHO05D008624 4.6e-73 279.3 348 42.5
Cfa015347 Carpinus fangiana HOM05D006883 ORTHO05D008624 6.1e-73 278.9 351 43.0
Sabra08G0157100 Salix brachista HOM05D006883 ORTHO05D008624 6.1e-73 278.9 337 43.6
SEGI_20295 Sequoiadendron giganteum HOM05D006883 ORTHO05D008624 6.1e-73 278.9 334 44.9
Ciclev10005043m.g Citrus clementina HOM05D006883 ORTHO05D008624 7.9e-73 278.5 337 43.6
Nitab4.5_0002986g0100 Nicotiana tabacum HOM05D006883 ORTHO05D008624 7.9e-73 278.5 348 42.8
QL06p007513 Quercus lobata HOM05D006883 ORTHO05D008624 7.9e-73 278.5 336 43.2
arahy.Tifrunner.gnm1.ann1.GN2N7N Arachis hypogaea HOM05D006883 ORTHO05D008624 1.0e-72 278.1 345 42.9
arahy.Tifrunner.gnm1.ann1.WI0ZBZ Arachis hypogaea HOM05D006883 ORTHO05D008624 1.0e-72 278.1 345 42.9
Thecc.04G278100 Theobroma cacao HOM05D006883 ORTHO05D008624 1.0e-72 278.1 346 43.1
Manes.15G016500 Manihot esculenta HOM05D006883 ORTHO05D008624 1.3e-72 277.7 337 44.2
Phvul.006G161600 Phaseolus vulgaris HOM05D006883 ORTHO05D008624 1.3e-72 277.7 362 41.7
ATR0706G234 Amborella trichopoda HOM05D006883 ORTHO05D008624 1.8e-72 277.3 336 42.6
Gorai.011G186200 Gossypium raimondii HOM05D006883 ORTHO05D008624 1.8e-72 277.3 345 43.2
Medtr2g020160 Medicago truncatula HOM05D006883 ORTHO05D008624 1.8e-72 277.3 349 43.0
CSS0011936 Camellia sinensis var. sinensis HOM05D006883 ORTHO05D008624 2.3e-72 276.9 363 41.6
CDE11G0693 Ceratophyllum demersum HOM05D006883 ORTHO05D008624 2.3e-72 276.9 336 42.6
TWI53G1857 Tripterygium wilfordii HOM05D006883 ORTHO05D008624 2.3e-72 276.9 337 43.0
Aqoxy2G03105 Aquilegia oxysepala HOM05D006883 ORTHO05D008624 3.0e-72 276.6 348 43.4
Ca_00572_v3 Cicer arietinum L. HOM05D006883 ORTHO05D008624 3.0e-72 276.6 334 43.4
Lj6P670T41 Lonicera japonica HOM05D006883 ORTHO05D008624 3.0e-72 276.6 348 42.8
Zm00001eb016830 Zea mays HOM05D006883 ORTHO05D008624 3.0e-72 276.6 357 43.4
CiPaw.02G086300 Carya illinoinensis HOM05D006883 ORTHO05D008624 3.9e-72 276.2 346 43.1
DCAR_030562 Daucus carota HOM05D006883 ORTHO05D008624 3.9e-72 276.2 337 43.3
Ah.06g192160 Amaranthus hybridus HOM05D006883 ORTHO05D008624 5.1e-72 275.8 343 43.7
CANSAT78G0922 Cannabis sativa HOM05D006883 ORTHO05D008624 5.1e-72 275.8 348 41.7
Glyma.15G097700 Glycine max HOM05D006883 ORTHO05D008624 6.7e-72 275.4 347 43.2
PSO170G0113 Papaver somniferum HOM05D006883 ORTHO05D008624 6.7e-72 275.4 348 41.7
PGR004G1631 Punica granatum HOM05D006883 ORTHO05D008624 6.7e-72 275.4 365 42.2
TPR.G1530 Trifolium pratense HOM05D006883 ORTHO05D008624 6.7e-72 275.4 327 43.1
TWI53G0676 Tripterygium wilfordii HOM05D006883 ORTHO05D008624 6.7e-72 275.4 334 43.1
CSS0008645 Camellia sinensis var. sinensis HOM05D006883 ORTHO05D008624 8.7e-72 275.0 335 42.7
CSS0009780 Camellia sinensis var. sinensis HOM05D006883 ORTHO05D008624 8.7e-72 275.0 363 41.3
MBI19_g30852_MAGBIO Magnolia biondii HOM05D006883 ORTHO05D008624 8.7e-72 275.0 350 43.1
BcaB08g36654 Brassica carinata HOM05D006883 ORTHO05D008624 1.1e-71 274.6 353 40.8
HanXRQChr08g0208101 Helianthus annuus HOM05D006883 ORTHO05D008624 1.1e-71 274.6 345 42.6
RcHm_v2.0_Chr4g0421151 Rosa chinensis HOM05D006883 ORTHO05D008624 1.1e-71 274.6 361 41.8
Glyma.13G215400 Glycine max HOM05D006883 ORTHO05D008624 2.5e-71 273.5 346 41.9
BraA10t44156Z Brassica rapa HOM05D006883 ORTHO05D008624 3.3e-71 273.1 337 42.4
CBR_g77624 Chara braunii HOM05D006883 ORTHO05D008624 3.3e-71 273.1 342 41.8
Dinv38322 Davidia involucrata HOM05D006883 ORTHO05D008624 4.3e-71 272.7 363 42.1
Thhalv10013668m.g Eutrema salsugineum HOM05D006883 ORTHO05D008624 4.3e-71 272.7 338 42.6
Actinidia23426 Actinidia chinensis HOM05D006883 ORTHO05D008624 5.7e-71 272.3 338 42.6
PSO210G3900 Papaver somniferum HOM05D006883 ORTHO05D008624 5.7e-71 272.3 348 41.1
A10p20920 Brassica napus HOM05D006883 ORTHO05D008624 7.4e-71 271.9 337 42.1
C09p57810 Brassica napus HOM05D006883 ORTHO05D008624 7.4e-71 271.9 337 42.1
FvH4_4g17240 Fragaria vesca HOM05D006883 ORTHO05D008624 7.4e-71 271.9 334 43.1
FAN12G0993 Fragaria x ananassa HOM05D006883 ORTHO05D008624 7.4e-71 271.9 334 43.1
FAN12G3260 Fragaria x ananassa HOM05D006883 ORTHO05D008624 7.4e-71 271.9 334 43.1
MD13G1173600 Malus domestica HOM05D006883 ORTHO05D008624 7.4e-71 271.9 334 43.1
SalBow2G1088 Salvia bowleyana HOM05D006883 ORTHO05D008624 9.7e-71 271.6 350 42.0
Os03g0351200 Oryza sativa ssp. japonica HOM05D006883 ORTHO05D008624 1.3e-70 271.2 351 43.0
Carub.0006s1695 Capsella rubella HOM05D006883 ORTHO05D008624 1.6e-70 270.8 336 42.6
CARHR194360 Cardamine hirsuta HOM05D006883 ORTHO05D008624 2.2e-70 270.4 346 42.2
Lsat_1_v5_gn_3_24840 Lactuca sativa HOM05D006883 ORTHO05D008624 2.2e-70 270.4 357 41.7
unitig_748.g8372 Utricularia gibba HOM05D006883 ORTHO05D008624 2.2e-70 270.4 347 42.9
FAN22G2222 Fragaria x ananassa HOM05D006883 ORTHO05D008624 2.8e-70 270.0 334 42.5
Rhsim04G0216600 Rhododendron simsii HOM05D006883 ORTHO05D008624 2.8e-70 270.0 335 43.0
Duzib052G0675 Durio zibethinus HOM05D006883 ORTHO05D008624 3.7e-70 269.6 334 43.4
Nn4g26002 Nelumbo nucifera HOM05D006883 ORTHO05D008624 3.7e-70 269.6 337 42.4
vmacro08200 Vaccinium macrocarpon HOM05D006883 ORTHO05D008624 3.7e-70 269.6 337 42.4
Actinidia40226 Actinidia chinensis HOM05D006883 ORTHO05D008624 4.8e-70 269.2 363 41.0
AT5G18660 Arabidopsis thaliana HOM05D006883 ORTHO05D008624 4.8e-70 269.2 346 41.9
BcaC04g18657 Brassica carinata HOM05D006883 ORTHO05D008624 4.8e-70 269.2 340 40.9
BolC9t58650H Brassica oleracea HOM05D006883 ORTHO05D008624 4.8e-70 269.2 340 40.9
ECA246G3623 Erigeron canadensis HOM05D006883 ORTHO05D008624 6.3e-70 268.9 346 41.6
AL6G29930 Arabidopsis lyrata HOM05D006883 ORTHO05D008624 8.2e-70 268.5 336 42.3
FAN17G0491 Fragaria x ananassa HOM05D006883 ORTHO05D008624 8.2e-70 268.5 334 42.5
TAR633G1607 Trochodendron aralioides HOM05D006883 ORTHO05D008624 8.2e-70 268.5 348 41.1
Sp6g25680 Schrenkiella parvula HOM05D006883 ORTHO05D008624 1.4e-69 267.7 336 42.0
THA.LOC104802726 Tarenaya hassleriana HOM05D006883 ORTHO05D008624 1.4e-69 267.7 365 41.1
Atru.BG.87.p Acer truncatum HOM05D006883 ORTHO05D008624 1.8e-69 267.3 332 43.7
Prupe.1G141800 Prunus persica HOM05D006883 ORTHO05D008624 2.4e-69 266.9 361 41.0
HPP92_006930 Vanilla planifolia HOM05D006883 ORTHO05D008624 3.1e-69 266.5 345 40.9
Cc03_g02320 Coffea canephora HOM05D006883 ORTHO05D008624 4.1e-69 266.2 337 43.6
Aa31LG11G10960 Aethionema arabicum HOM05D006883 ORTHO05D008624 6.9e-69 265.4 335 41.8
AUR62041032 Chenopodium quinoa HOM05D006883 ORTHO05D008624 6.9e-69 265.4 349 41.5
Sc25g0004770 Simmondsia chinensis HOM05D006883 ORTHO05D008624 9.0e-69 265.0 337 40.7
Oeu044787.1 Olea europaea HOM05D006883 ORTHO05D008624 1.2e-68 264.6 337 41.5
AUR62041764 Chenopodium quinoa HOM05D006883 ORTHO05D008624 2.0e-68 263.8 356 41.3
Cre01.g042800 Chlamydomonas reinhardtii HOM05D006883 ORTHO05D008624 3.4e-68 263.1 366 41.3
EL10Ac4g09099 Beta vulgaris HOM05D006883 ORTHO05D008624 4.5e-68 262.7 344 41.6
MSTRG.10057 Avicennia marina HOM05D006883 ORTHO05D008624 5.9e-68 262.3 345 42.3
Migut.G00206 Erythranthe guttata HOM05D006883 ORTHO05D008624 1.0e-67 261.5 337 41.8
MCO03G528 Micromonas commoda HOM05D006883 ORTHO05D008624 8.5e-67 258.5 339 41.0
SGA_v2.0_scaffold973G53763 Striga asiatica HOM05D006883 ORTHO05D008624 8.5e-67 258.5 350 39.7
SMO174G0102 Selaginella moellendorffii HOM05D006883 ORTHO05D008624 1.2e-65 254.6 336 41.4
CDE02G1591 Ceratophyllum demersum HOM05D006883 ORTHO05D008624 6.9e-61 238.8 334 39.2
VMungo0540G0878 Vigna mungo HOM05D006883 ORTHO05D008624 4.4e-55 219.5 346 37.3
Gohir.D10G166900 Gossypium hirsutum HOM05D006883 ORTHO05D008624 9.1e-53 211.8 257 44.4
Cpa.g.sc1008.1 Carica papaya HOM05D006883 ORTHO05D008624 2.3e-48 197.2 243 45.3
MELO3C006606.2 Cucumis melo HOM05D006883 ORTHO05D008624 3.4e-39 166.8 203 42.9
DCAR_030560 Daucus carota HOM05D006883 ORTHO05D008624 4.1e-37 159.8 225 41.3
Solyc01g067290.3 Solanum lycopersicum HOM05D006883 ORTHO05D008624 1.2e-33 148.3 190 41.1
DCAR_030558 Daucus carota HOM05D006883 ORTHO05D008624 2.1e-33 147.5 190 40.5
Oeu061954.1 Olea europaea HOM05D006883 ORTHO05D008624 2.2e-06 57.8 120 30.8


User provided reference genes

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