Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00006021 Prasinoderma coloniale HOM05D005722 ORTHO05D007934 1.6e-292 1008.8 544 100.0
MCO11G702 Micromonas commoda HOM05D005722 ORTHO05D007934 1.0e-134 484.6 512 54.7
Mapoly0002s0120 Marchantia polymorpha HOM05D005722 ORTHO05D007934 2.1e-132 476.9 511 52.3
Pp3c14_20990 Physcomitrium patens HOM05D005722 ORTHO05D007934 4.7e-132 475.7 511 52.6
Pp3c1_30640 Physcomitrium patens HOM05D005722 ORTHO05D007934 3.4e-130 469.5 516 52.7
Cre09.g389356 Chlamydomonas reinhardtii HOM05D005722 ORTHO05D007934 1.1e-125 454.5 517 49.9
Sabra06G0094100 Salix brachista HOM05D005722 ORTHO05D007934 3.0e-118 429.9 493 48.3
ATR0009G019 Amborella trichopoda HOM05D005722 ORTHO05D007934 8.7e-118 428.3 506 49.4
Atru.chr8.1708 Acer truncatum HOM05D005722 ORTHO05D007934 1.1e-117 427.9 500 48.8
Phvul.007G226300 Phaseolus vulgaris HOM05D005722 ORTHO05D007934 1.9e-117 427.2 504 47.2
Rhsim03G0086400 Rhododendron simsii HOM05D005722 ORTHO05D007934 1.6e-116 424.1 508 48.4
VMungo0720G2103 Vigna mungo HOM05D005722 ORTHO05D007934 1.6e-116 424.1 504 46.0
SMO115G0026 Selaginella moellendorffii HOM05D005722 ORTHO05D007934 4.8e-116 422.5 500 49.0
CANSAT56G0690 Cannabis sativa HOM05D005722 ORTHO05D007934 6.2e-116 422.2 493 48.1
Hma1.2p1_0547F.1_g176330 Hydrangea macrophylla HOM05D005722 ORTHO05D007934 8.1e-116 421.8 498 48.0
Ciclev10011424m.g Citrus clementina HOM05D005722 ORTHO05D007934 1.1e-115 421.4 489 48.3
vmacro23004 Vaccinium macrocarpon HOM05D005722 ORTHO05D007934 1.4e-115 421.0 494 49.0
Lalb_Chr02g0155431 Lupinus albus HOM05D005722 ORTHO05D007934 1.8e-115 420.6 490 48.2
Nn2g13890 Nelumbo nucifera HOM05D005722 ORTHO05D007934 5.3e-115 419.1 511 47.0
Glyma.13G147700 Glycine max HOM05D005722 ORTHO05D007934 6.9e-115 418.7 504 45.8
Migut.J00472 Erythranthe guttata HOM05D005722 ORTHO05D007934 9.0e-115 418.3 494 48.0
Lsat_1_v5_gn_2_20401 Lactuca sativa HOM05D005722 ORTHO05D007934 9.0e-115 418.3 508 45.7
Aqoxy1G01041 Aquilegia oxysepala HOM05D005722 ORTHO05D007934 1.2e-114 417.9 494 48.4
Potri.006G119500 Populus trichocarpa HOM05D005722 ORTHO05D007934 1.2e-114 417.9 489 47.4
DCAR_015016 Daucus carota HOM05D005722 ORTHO05D007934 1.5e-114 417.5 499 45.7
Manes.09G048478 Manihot esculenta HOM05D005722 ORTHO05D007934 1.5e-114 417.5 493 47.3
PGR004G2571 Punica granatum HOM05D005722 ORTHO05D007934 1.5e-114 417.5 502 47.4
Glyma.10G063100 Glycine max HOM05D005722 ORTHO05D007934 2.0e-114 417.2 512 45.7
CSS0018899 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 3.4e-114 416.4 499 47.5
Cc06_g04740 Coffea canephora HOM05D005722 ORTHO05D007934 3.4e-114 416.4 490 47.3
TAR623G1222 Trochodendron aralioides HOM05D005722 ORTHO05D007934 4.4e-114 416.0 487 48.3
QL07p041452 Quercus lobata HOM05D005722 ORTHO05D007934 5.8e-114 415.6 502 47.4
TWI74G0410 Tripterygium wilfordii HOM05D005722 ORTHO05D007934 9.9e-114 414.8 489 47.9
CSS0022139 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 2.2e-113 413.7 485 48.5
Cpa.g.sc5.129 Carica papaya HOM05D005722 ORTHO05D007934 3.8e-113 412.9 485 48.5
FAN05G1451 Fragaria x ananassa HOM05D005722 ORTHO05D007934 3.8e-113 412.9 501 48.7
Duzib128G0866 Durio zibethinus HOM05D005722 ORTHO05D007934 4.9e-113 412.5 498 47.0
FAN05G4610 Fragaria x ananassa HOM05D005722 ORTHO05D007934 4.9e-113 412.5 501 48.7
Cfa016476 Carpinus fangiana HOM05D005722 ORTHO05D007934 1.1e-112 411.4 486 47.9
Ah.08g211270 Amaranthus hybridus HOM05D005722 ORTHO05D007934 1.4e-112 411.0 504 46.0
Gohir.A09G143300 Gossypium hirsutum HOM05D005722 ORTHO05D007934 1.4e-112 411.0 489 47.0
Prupe.7G123300 Prunus persica HOM05D005722 ORTHO05D007934 1.9e-112 410.6 489 48.9
Gorai.006G160000 Gossypium raimondii HOM05D005722 ORTHO05D007934 2.4e-112 410.2 489 47.0
EL10Ac7g16706 Beta vulgaris HOM05D005722 ORTHO05D007934 3.2e-112 409.8 503 47.1
COL.COLO4_22250 Corchorus olitorius HOM05D005722 ORTHO05D007934 3.2e-112 409.8 485 47.8
FvH4_6g17170 Fragaria vesca HOM05D005722 ORTHO05D007934 3.2e-112 409.8 501 48.3
CiPaw.09G004900 Carya illinoinensis HOM05D005722 ORTHO05D007934 5.4e-112 409.1 498 47.2
PSO063G5110 Papaver somniferum HOM05D005722 ORTHO05D007934 5.4e-112 409.1 490 46.7
ClCG10G019670 Citrullus lanatus HOM05D005722 ORTHO05D007934 9.3e-112 408.3 504 46.0
PSO339G6299 Papaver somniferum HOM05D005722 ORTHO05D007934 1.2e-111 407.9 490 46.7
RcHm_v2.0_Chr3g0471261 Rosa chinensis HOM05D005722 ORTHO05D007934 1.2e-111 407.9 498 47.8
Gohir.D09G139500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 1.6e-111 407.5 457 48.6
Lj5g0013810 Lotus japonicus HOM05D005722 ORTHO05D007934 2.1e-111 407.1 490 46.1
CARHR209770 Cardamine hirsuta HOM05D005722 ORTHO05D007934 4.6e-111 406.0 491 47.5
AUR62042706 Chenopodium quinoa HOM05D005722 ORTHO05D007934 4.6e-111 406.0 534 44.8
Peaxi162Scf00138g00041 Petunia axillaris HOM05D005722 ORTHO05D007934 4.6e-111 406.0 489 46.6
MELO3C009405.2 Cucumis melo HOM05D005722 ORTHO05D007934 6.0e-111 405.6 500 46.0
Carub.0006s0238 Capsella rubella HOM05D005722 ORTHO05D007934 1.7e-110 404.1 491 46.6
PGSC0003DMG400003879 Solanum tuberosum HOM05D005722 ORTHO05D007934 1.7e-110 404.1 491 46.4
MSTRG.19206 Avicennia marina HOM05D005722 ORTHO05D007934 2.3e-110 403.7 486 47.1
C03p01590 Brassica napus HOM05D005722 ORTHO05D007934 3.0e-110 403.3 524 45.4
A03p01230 Brassica napus HOM05D005722 ORTHO05D007934 5.1e-110 402.5 533 44.8
BraA03t09503Z Brassica rapa HOM05D005722 ORTHO05D007934 5.1e-110 402.5 533 45.0
Ca_04564_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 5.1e-110 402.5 493 46.0
Thhalv10015725m.g Eutrema salsugineum HOM05D005722 ORTHO05D007934 5.1e-110 402.5 500 46.0
Medtr1g062130 Medicago truncatula HOM05D005722 ORTHO05D007934 5.1e-110 402.5 504 45.4
unitig_578.g15784 Utricularia gibba HOM05D005722 ORTHO05D007934 5.1e-110 402.5 490 46.9
Haze_19473 Corylus avellana HOM05D005722 ORTHO05D007934 6.6e-110 402.1 445 49.7
ECA238G3369 Erigeron canadensis HOM05D005722 ORTHO05D007934 6.6e-110 402.1 518 44.2
BolC3t12711H Brassica oleracea HOM05D005722 ORTHO05D007934 8.7e-110 401.7 524 45.4
AUR62026979 Chenopodium quinoa HOM05D005722 ORTHO05D007934 8.7e-110 401.7 505 45.5
MBI18_g39612_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 8.7e-110 401.7 503 46.3
MD12G1103200 Malus domestica HOM05D005722 ORTHO05D007934 1.1e-109 401.4 489 47.0
Nitab4.5_0004731g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 1.1e-109 401.4 497 44.7
Os02g0666700 Oryza sativa ssp. japonica HOM05D005722 ORTHO05D007934 1.1e-109 401.4 499 47.1
Sopen09g003380 Solanum pennellii HOM05D005722 ORTHO05D007934 1.1e-109 401.4 491 46.2
Zm00001eb249990 Zea mays HOM05D005722 ORTHO05D007934 1.1e-109 401.4 505 45.9
CAN.G1038.3 Capsicum annuum HOM05D005722 ORTHO05D007934 1.5e-109 401.0 491 46.2
Sp6g39190 Schrenkiella parvula HOM05D005722 ORTHO05D007934 1.5e-109 401.0 500 46.0
Thecc.05G075200 Theobroma cacao HOM05D005722 ORTHO05D007934 1.5e-109 401.0 499 46.3
THA.LOC104816667 Tarenaya hassleriana HOM05D005722 ORTHO05D007934 2.5e-109 400.2 483 47.6
arahy.Tifrunner.gnm1.ann1.D7QF3J Arachis hypogaea HOM05D005722 ORTHO05D007934 3.3e-109 399.8 490 45.5
arahy.Tifrunner.gnm1.ann1.P0W3IN Arachis hypogaea HOM05D005722 ORTHO05D007934 3.3e-109 399.8 490 45.5
AT5G03555 Arabidopsis thaliana HOM05D005722 ORTHO05D007934 7.3e-109 398.7 491 46.4
Aa31LG1G21640 Aethionema arabicum HOM05D005722 ORTHO05D007934 9.6e-109 398.3 491 46.4
CsaV3_3G036500 Cucumis sativus L. HOM05D005722 ORTHO05D007934 1.3e-108 397.9 482 45.9
Lj1g0006800 Lotus japonicus HOM05D005722 ORTHO05D007934 1.3e-108 397.9 486 46.1
AL6G13040 Arabidopsis lyrata HOM05D005722 ORTHO05D007934 1.6e-108 397.5 483 47.2
Lalb_Chr25g0288811 Lupinus albus HOM05D005722 ORTHO05D007934 1.6e-108 397.5 485 45.8
HPP92_025568 Vanilla planifolia HOM05D005722 ORTHO05D007934 1.6e-108 397.5 488 46.9
HanXRQChr14g0432851 Helianthus annuus HOM05D005722 ORTHO05D007934 2.1e-108 397.1 487 45.8
SalBow3G1392 Salvia bowleyana HOM05D005722 ORTHO05D007934 2.8e-108 396.7 496 45.4
Sed0005717 Sechium edule HOM05D005722 ORTHO05D007934 2.8e-108 396.7 498 46.0
SGA_v2.0_scaffold75G24819 Striga asiatica HOM05D005722 ORTHO05D007934 2.8e-108 396.7 519 45.1
Sc20g0005780 Simmondsia chinensis HOM05D005722 ORTHO05D007934 3.6e-108 396.4 484 45.7
TPR.G22453 Trifolium pratense HOM05D005722 ORTHO05D007934 4.8e-108 396.0 500 45.2
SalBow3G1081 Salvia bowleyana HOM05D005722 ORTHO05D007934 8.1e-108 395.2 496 45.2
SEGI_35570 Sequoiadendron giganteum HOM05D005722 ORTHO05D007934 1.8e-107 394.0 506 44.1
Psat3g038760 Pisum sativum HOM05D005722 ORTHO05D007934 2.4e-107 393.7 489 45.2
Solyc09g008550.4 Solanum lycopersicum HOM05D005722 ORTHO05D007934 5.3e-107 392.5 487 44.8
TPR.G31667 Trifolium pratense HOM05D005722 ORTHO05D007934 5.3e-107 392.5 501 44.1
Medtr7g102810 Medicago truncatula HOM05D005722 ORTHO05D007934 1.5e-106 391.0 489 44.8
Gohir.D09G139600 Gossypium hirsutum HOM05D005722 ORTHO05D007934 2.6e-106 390.2 494 45.5
Gorai.006G160100 Gossypium raimondii HOM05D005722 ORTHO05D007934 2.6e-106 390.2 494 45.5
Psat6g077240 Pisum sativum HOM05D005722 ORTHO05D007934 2.6e-106 390.2 493 45.0
FAN02G1363 Fragaria x ananassa HOM05D005722 ORTHO05D007934 7.6e-106 388.7 461 48.8
Gohir.A09G143500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 1.1e-104 384.8 491 45.4
Nitab4.5_0003906g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 2.1e-103 380.6 497 42.9
MBI18_g31623_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 5.3e-99 365.9 505 42.8
Ca_30109_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 9.0e-99 365.2 428 45.6
MBI18_g39457_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 1.2e-98 364.8 505 42.6
MBI18_g19054_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 2.6e-98 363.6 499 42.1
CDE08G1312 Ceratophyllum demersum HOM05D005722 ORTHO05D007934 7.6e-98 362.1 410 48.5
FAN14G5091 Fragaria x ananassa HOM05D005722 ORTHO05D007934 7.6e-98 362.1 456 47.8
Cc06_g04750 Coffea canephora HOM05D005722 ORTHO05D007934 3.1e-91 340.1 495 40.2
Eucgr.A01597 Eucalyptus grandis HOM05D005722 ORTHO05D007934 1.7e-89 334.3 493 42.2
Actinidia26637 Actinidia chinensis HOM05D005722 ORTHO05D007934 1.0e-86 325.1 456 41.0
GSVIVG01033705001 Vitis vinifera HOM05D005722 ORTHO05D007934 1.5e-85 321.2 498 39.6
Cfa016468 Carpinus fangiana HOM05D005722 ORTHO05D007934 2.9e-81 307.0 444 43.5
Dinv35829 Davidia involucrata HOM05D005722 ORTHO05D007934 5.0e-81 306.2 482 40.9
Actinidia28931 Actinidia chinensis HOM05D005722 ORTHO05D007934 1.7e-68 264.6 390 42.1
Sc20g0005800 Simmondsia chinensis HOM05D005722 ORTHO05D007934 1.2e-66 258.5 323 44.3
Lj2P123T37 Lonicera japonica HOM05D005722 ORTHO05D007934 1.5e-66 258.1 318 47.2
Cfa025019 Carpinus fangiana HOM05D005722 ORTHO05D123305 1.3e-41 175.3 492 29.1
Haze_02843 Corylus avellana HOM05D005722 ORTHO05D029153 3.4e-29 134.0 120 52.5
Pp3s34_270 Physcomitrium patens HOM05D005722 ORTHO05D317165 2.4e-27 127.9 434 27.9
Haze_19472 Corylus avellana HOM05D005722 ORTHO05D007934 9.2e-27 125.9 170 44.7
Sc20g0005790 Simmondsia chinensis HOM05D005722 ORTHO05D029153 1.2e-23 115.5 112 51.8
MCO11G808 Micromonas commoda HOM05D005722 ORTHO05D268580 1.2e-15 89.0 496 25.8
MCO10G252 Micromonas commoda HOM05D005722 ORTHO05D270642 4.7e-15 87.0 455 29.2
TPR.G39511 Trifolium pratense HOM05D005722 ORTHO05D029153 4.0e-14 84.0 60 58.3
Lsat_1_v5_gn_4_152401 Lactuca sativa HOM05D005722 ORTHO05D007934 5.2e-06 57.0 80 42.5


User provided reference genes

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