Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00006009 Prasinoderma coloniale HOM05D000101 ORTHO05D007021 1.8e-99 365.9 189 100.0
Cre07.g322250 Chlamydomonas reinhardtii HOM05D000101 ORTHO05D007021 1.1e-30 137.5 178 43.3
SEGI_13887 Sequoiadendron giganteum HOM05D000101 ORTHO05D007021 6.0e-26 121.7 176 41.5
AL4G42630 Arabidopsis lyrata HOM05D000101 ORTHO05D007021 1.8e-25 120.2 183 41.0
Glyma.07G235100 Glycine max HOM05D000101 ORTHO05D007021 1.8e-25 120.2 189 40.7
MCO04G049 Micromonas commoda HOM05D000101 ORTHO05D007021 1.8e-25 120.2 169 45.6
Gohir.D08G019100 Gossypium hirsutum HOM05D000101 ORTHO05D007021 3.0e-25 119.4 183 39.3
Gorai.004G013600 Gossypium raimondii HOM05D000101 ORTHO05D007021 3.0e-25 119.4 183 39.3
MBI16_g00843_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D007021 3.0e-25 119.4 180 38.9
Potri.001G272100 Populus trichocarpa HOM05D000101 ORTHO05D007021 3.0e-25 119.4 183 40.4
AT2G43760 Arabidopsis thaliana HOM05D000101 ORTHO05D007021 3.9e-25 119.0 183 40.4
Lalb_Chr06g0173421 Lupinus albus HOM05D000101 ORTHO05D007021 5.1e-25 118.6 189 39.7
VMungo0540G1253 Vigna mungo HOM05D000101 ORTHO05D007021 5.1e-25 118.6 189 39.2
CARHR138950 Cardamine hirsuta HOM05D000101 ORTHO05D007021 6.7e-25 118.2 161 44.1
Phvul.006G016500 Phaseolus vulgaris HOM05D000101 ORTHO05D007021 6.7e-25 118.2 189 39.2
A04p33060 Brassica napus HOM05D000101 ORTHO05D007021 8.7e-25 117.9 161 44.7
BraA04t18766Z Brassica rapa HOM05D000101 ORTHO05D007021 8.7e-25 117.9 161 44.7
Glyma.20G043800 Glycine max HOM05D000101 ORTHO05D007021 8.7e-25 117.9 189 39.7
PSO017G1758 Papaver somniferum HOM05D000101 ORTHO05D007021 8.7e-25 117.9 164 42.7
PGR119G0271 Punica granatum HOM05D000101 ORTHO05D007021 8.7e-25 117.9 190 42.1
AagrBONN_evm.TU.Sc2ySwM_228.724 Anthoceros agrestis HOM05D000101 ORTHO05D007021 1.1e-24 117.5 184 39.7
Carub.0004s2629 Capsella rubella HOM05D000101 ORTHO05D007021 1.5e-24 117.1 183 39.9
Eucgr.J00668 Eucalyptus grandis HOM05D000101 ORTHO05D007021 1.5e-24 117.1 192 40.6
Glyma.07G235000 Glycine max HOM05D000101 ORTHO05D007021 1.5e-24 117.1 189 39.7
Manes.01G177200 Manihot esculenta HOM05D000101 ORTHO05D007021 1.5e-24 117.1 190 41.6
Sp4g25830 Schrenkiella parvula HOM05D000101 ORTHO05D007021 2.5e-24 116.3 162 43.2
A05p03970 Brassica napus HOM05D000101 ORTHO05D007021 3.3e-24 115.9 189 40.2
Cpa.g.sc9.381 Carica papaya HOM05D000101 ORTHO05D007021 3.3e-24 115.9 157 43.9
Duzib170G0394 Durio zibethinus HOM05D000101 ORTHO05D007021 3.3e-24 115.9 183 39.9
Lj6g0006302 Lotus japonicus HOM05D000101 ORTHO05D007021 3.3e-24 115.9 189 40.7
TPR.G11957 Trifolium pratense HOM05D000101 ORTHO05D007021 3.3e-24 115.9 189 40.2
CiPaw.13G147800 Carya illinoinensis HOM05D000101 ORTHO05D007021 4.3e-24 115.5 184 39.7
Thhalv10001567m.g Eutrema salsugineum HOM05D000101 ORTHO05D007021 4.3e-24 115.5 183 39.9
GSVIVG01037393001 Vitis vinifera HOM05D000101 ORTHO05D007021 4.3e-24 115.5 190 40.5
Aqoxy2G03523 Aquilegia oxysepala HOM05D000101 ORTHO05D007021 5.6e-24 115.2 157 43.3
COL.COLO4_33246 Corchorus olitorius HOM05D000101 ORTHO05D007021 5.6e-24 115.2 190 40.0
CsaV3_6G038720 Cucumis sativus L. HOM05D000101 ORTHO05D007021 5.6e-24 115.2 183 39.9
Medtr8g036270 Medicago truncatula HOM05D000101 ORTHO05D007021 5.6e-24 115.2 189 40.7
Thecc.09G252400 Theobroma cacao HOM05D000101 ORTHO05D007021 5.6e-24 115.2 157 43.9
Aa31LG1G25480 Aethionema arabicum HOM05D000101 ORTHO05D007021 7.4e-24 114.8 183 39.3
Lj6g0007250 Lotus japonicus HOM05D000101 ORTHO05D007021 7.4e-24 114.8 189 40.7
BcaC02g12365 Brassica carinata HOM05D000101 ORTHO05D007021 9.6e-24 114.4 167 43.1
C04p04720 Brassica napus HOM05D000101 ORTHO05D007021 9.6e-24 114.4 167 43.1
BolC4t22102H Brassica oleracea HOM05D000101 ORTHO05D007021 9.6e-24 114.4 167 43.1
CANSAT54G0276 Cannabis sativa HOM05D000101 ORTHO05D007021 9.6e-24 114.4 183 39.3
PSO675G1036 Papaver somniferum HOM05D000101 ORTHO05D007021 9.6e-24 114.4 164 42.1
ATR0626G326 Amborella trichopoda HOM05D000101 ORTHO05D007021 1.3e-23 114.0 174 39.7
Pp3c13_8000 Physcomitrium patens HOM05D000101 ORTHO05D007021 1.3e-23 114.0 182 40.1
Prupe.4G269700 Prunus persica HOM05D000101 ORTHO05D007021 1.3e-23 114.0 183 39.9
Sed0019464 Sechium edule HOM05D000101 ORTHO05D007021 1.3e-23 114.0 183 39.9
TWI79G1559 Tripterygium wilfordii HOM05D000101 ORTHO05D007021 1.3e-23 114.0 183 39.3
Nn2g10490 Nelumbo nucifera HOM05D000101 ORTHO05D007021 1.6e-23 113.6 164 42.7
Oeu041722.1 Olea europaea HOM05D000101 ORTHO05D007021 1.6e-23 113.6 188 38.8
GSVIVG01037400001 Vitis vinifera HOM05D000101 ORTHO05D007021 1.6e-23 113.6 190 40.0
BraA05t19385Z Brassica rapa HOM05D000101 ORTHO05D007021 2.1e-23 113.2 189 39.2
CAN.G65.208 Capsicum annuum HOM05D000101 ORTHO05D007021 2.1e-23 113.2 183 38.3
Duzib150G0203 Durio zibethinus HOM05D000101 ORTHO05D007021 2.1e-23 113.2 183 38.8
Duzib150G0818 Durio zibethinus HOM05D000101 ORTHO05D007021 2.1e-23 113.2 183 38.8
ClCG02G022620 Citrullus lanatus HOM05D000101 ORTHO05D007021 2.8e-23 112.8 183 39.3
Mapoly0016s0014 Marchantia polymorpha HOM05D000101 ORTHO05D007021 2.8e-23 112.8 180 38.3
TAR383G0318 Trochodendron aralioides HOM05D000101 ORTHO05D007021 2.8e-23 112.8 180 37.2
unitig_22.g6178 Utricularia gibba HOM05D000101 ORTHO05D007021 2.8e-23 112.8 164 45.7
Gohir.A08G009100 Gossypium hirsutum HOM05D000101 ORTHO05D007021 3.7e-23 112.5 157 42.0
QL01p016256 Quercus lobata HOM05D000101 ORTHO05D007021 3.7e-23 112.5 183 39.3
SMO119G0082 Selaginella moellendorffii HOM05D000101 ORTHO05D007021 3.7e-23 112.5 173 39.9
TAR383G0810 Trochodendron aralioides HOM05D000101 ORTHO05D007021 3.7e-23 112.5 180 37.2
CDE06G1918 Ceratophyllum demersum HOM05D000101 ORTHO05D007021 4.8e-23 112.1 175 38.3
Dinv29321 Davidia involucrata HOM05D000101 ORTHO05D007021 4.8e-23 112.1 183 38.3
MBI15_g46843_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D007021 4.8e-23 112.1 180 37.8
Ca_25981_v3 Cicer arietinum L. HOM05D000101 ORTHO05D007021 6.2e-23 111.7 191 39.8
QL01p016239 Quercus lobata HOM05D000101 ORTHO05D007021 6.2e-23 111.7 183 38.8
Medtr3g041720 Medicago truncatula HOM05D000101 ORTHO05D007021 8.1e-23 111.3 189 39.2
Os02g0140300 Oryza sativa ssp. japonica HOM05D000101 ORTHO05D007021 8.1e-23 111.3 161 41.6
Zm00001eb208120 Zea mays HOM05D000101 ORTHO05D007021 8.1e-23 111.3 162 40.7
FAN23G0853 Fragaria x ananassa HOM05D002590 ORTHO05D002763 1.1e-22 110.9 183 38.3
Gorai.001G132800 Gossypium raimondii HOM05D000101 ORTHO05D007021 1.1e-22 110.9 183 38.3
Actinidia20391 Actinidia chinensis HOM05D000101 ORTHO05D007021 1.4e-22 110.5 157 41.4
MELO3C014535.2 Cucumis melo HOM05D000101 ORTHO05D007021 1.4e-22 110.5 183 38.8
Lj2C98T13 Lonicera japonica HOM05D000101 ORTHO05D007021 1.4e-22 110.5 190 37.4
Cc01_g07360 Coffea canephora HOM05D000101 ORTHO05D007021 1.8e-22 110.2 183 38.3
FvH4_1g18980 Fragaria vesca HOM05D000101 ORTHO05D007021 1.8e-22 110.2 183 37.7
Ciclev10016806m.g Citrus clementina HOM05D000101 ORTHO05D007021 2.4e-22 109.8 183 37.7
RcHm_v2.0_Chr2g0110001 Rosa chinensis HOM05D000101 ORTHO05D007021 2.4e-22 109.8 183 37.7
Solyc06g073615.1 Solanum lycopersicum HOM05D000101 ORTHO05D007021 2.4e-22 109.8 183 38.3
Sopen06g030030 Solanum pennellii HOM05D000101 ORTHO05D007021 2.4e-22 109.8 183 38.3
FAN28G0419 Fragaria x ananassa HOM05D000101 ORTHO05D007021 3.1e-22 109.4 183 37.7
Psat5g198640 Pisum sativum HOM05D000101 ORTHO05D007021 3.1e-22 109.4 164 39.6
Lj2C4T1 Lonicera japonica HOM05D000101 ORTHO05D007021 4.0e-22 109.0 190 36.8
Sc06g0003480 Simmondsia chinensis HOM05D000101 ORTHO05D007021 4.0e-22 109.0 192 37.0
CDE04G1472 Ceratophyllum demersum HOM05D000101 ORTHO05D007021 5.3e-22 108.6 175 37.1
HanXRQChr10g0307811 Helianthus annuus HOM05D000101 ORTHO05D007021 5.3e-22 108.6 161 41.0
EL10Ac4g10078 Beta vulgaris HOM05D000101 ORTHO05D007021 6.9e-22 108.2 190 38.4
Migut.N02406 Erythranthe guttata HOM05D000101 ORTHO05D007021 9.0e-22 107.8 164 42.1
Nitab4.5_0006265g0050 Nicotiana tabacum HOM05D000101 ORTHO05D007021 1.2e-21 107.5 183 37.7
PGSC0003DMG400005919 Solanum tuberosum HOM05D000101 ORTHO05D007021 1.2e-21 107.5 157 41.4
Rhsim13G0204000 Rhododendron simsii HOM05D000101 ORTHO05D007021 1.5e-21 107.1 157 40.1
SGA_v2.0_scaffold79G25529 Striga asiatica HOM05D000101 ORTHO05D007021 1.5e-21 107.1 157 41.4
THA.LOC104808404 Tarenaya hassleriana HOM05D000101 ORTHO05D007021 1.5e-21 107.1 165 41.2
DCAR_002122 Daucus carota HOM05D000101 ORTHO05D007021 2.0e-21 106.7 157 40.1
SalBow3G0539 Salvia bowleyana HOM05D000101 ORTHO05D007021 2.0e-21 106.7 178 41.0
Ah.06g194870 Amaranthus hybridus HOM05D000101 ORTHO05D007021 2.6e-21 106.3 188 38.3
MSTRG.17651 Avicennia marina HOM05D000101 ORTHO05D007021 2.6e-21 106.3 190 36.8
Dinv29322 Davidia involucrata HOM05D000101 ORTHO05D007021 2.6e-21 106.3 183 37.2
Dinv29324 Davidia involucrata HOM05D000101 ORTHO05D007021 2.6e-21 106.3 183 37.2
Nitab4.5_0000271g0210 Nicotiana tabacum HOM05D000101 ORTHO05D007021 2.6e-21 106.3 183 37.2
HPP92_017376 Vanilla planifolia HOM05D000101 ORTHO05D007021 2.6e-21 106.3 157 40.8
Haze_23275 Corylus avellana HOM05D000101 ORTHO05D007021 3.4e-21 105.9 183 36.6
Peaxi162Scf00526g00083 Petunia axillaris HOM05D000101 ORTHO05D007021 3.4e-21 105.9 183 37.2
SGA_v2.0_scaffold52G19230 Striga asiatica HOM05D000101 ORTHO05D007021 5.8e-21 105.1 160 40.6
Lsat_1_v5_gn_5_88160 Lactuca sativa HOM05D000101 ORTHO05D007021 7.6e-21 104.8 161 39.8
SGA_v2.0_scaffold13G06395 Striga asiatica HOM05D000101 ORTHO05D007021 7.6e-21 104.8 161 40.4
ECA234G3554 Erigeron canadensis HOM05D000101 ORTHO05D007021 9.9e-21 104.4 164 41.5
CSS0002182 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D007021 1.4e-19 100.5 180 35.6
AUR62000226 Chenopodium quinoa HOM05D000101 ORTHO05D007021 1.4e-19 100.5 164 41.5
CBR_g72677 Chara braunii HOM05D000101 ORTHO05D007021 7.9e-18 94.7 159 39.6
SHI24924 Sapria himalayana HOM05D000101 ORTHO05D007021 5.1e-17 92.0 157 37.6
BcaC02g07150 Brassica carinata HOM05D000101 ORTHO05D007021 9.6e-16 87.8 159 40.9
Aqoxy102s002 Aquilegia oxysepala HOM05D000101 ORTHO05D007021 2.0e-13 80.1 66 54.5
Atru.chr5.404 Acer truncatum HOM05D000101 ORTHO05D007021 4.5e-13 79.0 64 57.8
Gohir.A07G118800 Gossypium hirsutum HOM05D000101 ORTHO05D007021 7.6e-13 78.2 160 33.1
Gohir.D07G123100 Gossypium hirsutum HOM05D000101 ORTHO05D007021 4.9e-12 75.5 161 34.2
Sabra16G0167400 Salix brachista HOM05D000101 ORTHO05D007021 8.4e-12 74.7 54 63.0
BcaB02g08903 Brassica carinata HOM05D005622 ORTHO05D002854 1.1e-08 64.3 43 65.1
GSVIVG01027252001 Vitis vinifera HOM05D000101 ORTHO05D007021 2.5e-08 63.2 47 57.4
Lsat_1_v5_gn_5_88140 Lactuca sativa HOM05D000101 ORTHO05D007021 3.7e-07 59.3 148 31.1
AUR62006572 Chenopodium quinoa HOM05D000101 ORTHO05D007021 6.3e-07 58.5 164 33.5
Atru.chr3.2842 Acer truncatum HOM05D000101 ORTHO05D007021 1.8e-06 57.0 129 34.9


User provided reference genes

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