Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PRCOL_00005580 Prasinoderma coloniale HOM05D003634 ORTHO05D004146 2.6e-152 542.0 268 100.0
Carub.0001s0601 Capsella rubella HOM05D003634 ORTHO05D004146 1.7e-50 203.8 191 54.5
AL1G16690 Arabidopsis lyrata HOM05D003634 ORTHO05D004146 2.9e-50 203.0 191 55.0
A08p35900 Brassica napus HOM05D003634 ORTHO05D004146 2.9e-50 203.0 192 53.1
BraA08t35497Z Brassica rapa HOM05D003634 ORTHO05D004146 2.9e-50 203.0 192 53.1
CARHR006360 Cardamine hirsuta HOM05D003634 ORTHO05D004146 6.5e-50 201.8 191 53.9
AT1G06680 Arabidopsis thaliana HOM05D003634 ORTHO05D004146 8.5e-50 201.4 191 54.5
Thhalv10017096m.g Eutrema salsugineum HOM05D003634 ORTHO05D004146 8.5e-50 201.4 191 55.0
BcaC02g11165 Brassica carinata HOM05D003634 ORTHO05D004146 1.1e-49 201.1 191 54.5
A05p14800 Brassica napus HOM05D003634 ORTHO05D004146 1.1e-49 201.1 191 54.5
C04p19800 Brassica napus HOM05D003634 ORTHO05D004146 1.1e-49 201.1 191 54.5
C08p02670 Brassica napus HOM05D003634 ORTHO05D004146 1.1e-49 201.1 191 53.4
BolC4t23513H Brassica oleracea HOM05D003634 ORTHO05D004146 1.1e-49 201.1 191 54.5
BolC8t47063H Brassica oleracea HOM05D003634 ORTHO05D004146 1.1e-49 201.1 191 53.4
BraA05t20408Z Brassica rapa HOM05D003634 ORTHO05D004146 1.1e-49 201.1 191 54.5
BcaC07g42054 Brassica carinata HOM05D003634 ORTHO05D004146 1.4e-49 200.7 191 52.9
A09p66850 Brassica napus HOM05D003634 ORTHO05D004146 1.4e-49 200.7 191 52.9
C08p51070 Brassica napus HOM05D003634 ORTHO05D004146 1.4e-49 200.7 191 52.9
BolC8t52634H Brassica oleracea HOM05D003634 ORTHO05D004146 1.4e-49 200.7 191 52.9
BraA09t42022Z Brassica rapa HOM05D003634 ORTHO05D004146 1.4e-49 200.7 191 52.9
CARHR124260 Cardamine hirsuta HOM05D003634 ORTHO05D004146 1.4e-49 200.7 191 54.5
BolC5t29259H Brassica oleracea HOM05D003634 ORTHO05D004146 2.5e-49 199.9 191 52.9
Sp1g05410 Schrenkiella parvula HOM05D003634 ORTHO05D004146 2.5e-49 199.9 191 53.4
THA.LOC104826247 Tarenaya hassleriana HOM05D003634 ORTHO05D004146 2.5e-49 199.9 191 53.9
AL4G25720 Arabidopsis lyrata HOM05D003634 ORTHO05D004146 3.2e-49 199.5 191 53.9
Cpa.g.sc187.7 Carica papaya HOM05D003634 ORTHO05D004146 3.2e-49 199.5 191 52.9
BcaB02g10342 Brassica carinata HOM05D003634 ORTHO05D004146 4.2e-49 199.1 191 53.9
Carub.0004s1200 Capsella rubella HOM05D003634 ORTHO05D004146 4.2e-49 199.1 191 53.9
C05p04870 Brassica napus HOM05D003634 ORTHO05D004146 5.5e-49 198.7 191 52.9
Aa31LG1G7720 Aethionema arabicum HOM05D003634 ORTHO05D004146 9.4e-49 198.0 191 52.4
BcaNung05935 Brassica carinata HOM05D003634 ORTHO05D004146 9.4e-49 198.0 265 44.2
HanXRQChr04g0099261 Helianthus annuus HOM05D003634 ORTHO05D004146 9.4e-49 198.0 191 51.8
HanXRQChr05g0129681 Helianthus annuus HOM05D003634 ORTHO05D004146 9.4e-49 198.0 191 53.4
Oeu056847.1 Olea europaea HOM05D003634 ORTHO05D004146 9.4e-49 198.0 191 53.4
Cre12.g550850 Chlamydomonas reinhardtii HOM05D003634 ORTHO05D004146 1.2e-48 197.6 193 53.9
Actinidia07505 Actinidia chinensis HOM05D003634 ORTHO05D004146 1.6e-48 197.2 191 52.4
Aqoxy1G01593 Aquilegia oxysepala HOM05D003634 ORTHO05D004146 1.6e-48 197.2 191 53.9
ECA234G0286 Erigeron canadensis HOM05D003634 ORTHO05D004146 2.1e-48 196.8 191 52.9
Ca_13941_v3 Cicer arietinum L. HOM05D003634 ORTHO05D004146 2.7e-48 196.4 191 52.9
PSO541G1729 Papaver somniferum HOM05D003634 ORTHO05D004146 2.7e-48 196.4 191 51.3
PSO675G5089 Papaver somniferum HOM05D003634 ORTHO05D004146 2.7e-48 196.4 191 51.3
DCAR_023039 Daucus carota HOM05D003634 ORTHO05D004146 3.6e-48 196.1 191 51.3
Eucgr.A02039 Eucalyptus grandis HOM05D003634 ORTHO05D004146 3.6e-48 196.1 191 52.9
Thhalv10008504m.g Eutrema salsugineum HOM05D003634 ORTHO05D004146 3.6e-48 196.1 265 44.5
A10p05270 Brassica napus HOM05D003634 ORTHO05D004146 4.7e-48 195.7 265 44.2
BraA10t42792Z Brassica rapa HOM05D003634 ORTHO05D004146 4.7e-48 195.7 265 44.2
ECA246G2888 Erigeron canadensis HOM05D003634 ORTHO05D004146 4.7e-48 195.7 191 51.8
THA.LOC104800813 Tarenaya hassleriana HOM05D003634 ORTHO05D004146 4.7e-48 195.7 191 53.4
THA.LOC104816082 Tarenaya hassleriana HOM05D003634 ORTHO05D004146 4.7e-48 195.7 191 52.4
ClCG07G010800 Citrullus lanatus HOM05D003634 ORTHO05D004146 6.1e-48 195.3 191 51.3
Prupe.3G179400 Prunus persica HOM05D003634 ORTHO05D004146 6.1e-48 195.3 191 53.4
MELO3C016190.2 Cucumis melo HOM05D003634 ORTHO05D004146 7.9e-48 194.9 191 51.8
Aa31LG5G6070 Aethionema arabicum HOM05D003634 ORTHO05D004146 1.0e-47 194.5 210 49.0
DCAR_009820 Daucus carota HOM05D003634 ORTHO05D004146 1.0e-47 194.5 191 51.8
MBI02_g35794_MAGBIO Magnolia biondii HOM05D003634 ORTHO05D004146 1.0e-47 194.5 191 54.5
VMungo0540G1926 Vigna mungo HOM05D003634 ORTHO05D004146 1.0e-47 194.5 191 52.9
Ah.03g147560 Amaranthus hybridus HOM05D003634 ORTHO05D004146 1.4e-47 194.1 191 50.8
RcHm_v2.0_Chr2g0152481 Rosa chinensis HOM05D003634 ORTHO05D004146 1.4e-47 194.1 191 53.4
EL10Ac6g15357 Beta vulgaris HOM05D003634 ORTHO05D004146 1.8e-47 193.7 191 51.3
Phvul.006G027801 Phaseolus vulgaris HOM05D003634 ORTHO05D004146 1.8e-47 193.7 191 52.4
Phvul.008G196500 Phaseolus vulgaris HOM05D003634 ORTHO05D004146 1.8e-47 193.7 191 52.4
TPR.G8779 Trifolium pratense HOM05D003634 ORTHO05D004146 1.8e-47 193.7 191 51.8
CDE12G0092 Ceratophyllum demersum HOM05D003634 ORTHO05D004146 2.3e-47 193.4 192 50.5
Nitab4.5_0000019g0250 Nicotiana tabacum HOM05D003634 ORTHO05D004146 2.3e-47 193.4 191 51.8
Pp3c2_23590 Physcomitrium patens HOM05D003634 ORTHO05D004146 2.3e-47 193.4 191 51.3
Ah.02g120770 Amaranthus hybridus HOM05D003634 ORTHO05D004146 3.0e-47 193.0 191 51.3
HanXRQChr06g0171591 Helianthus annuus HOM05D003634 ORTHO05D004146 3.0e-47 193.0 191 50.3
Pp3c1_16780 Physcomitrium patens HOM05D003634 ORTHO05D004146 3.9e-47 192.6 191 50.3
Medtr5g090410 Medicago truncatula HOM05D003634 ORTHO05D004146 6.7e-47 191.8 191 52.4
Sc07g0004260 Simmondsia chinensis HOM05D003634 ORTHO05D004146 6.7e-47 191.8 191 51.3
vmacro08742 Vaccinium macrocarpon HOM05D003634 ORTHO05D004146 6.7e-47 191.8 191 52.4
Medtr3g449930 Medicago truncatula HOM05D003634 ORTHO05D004146 8.8e-47 191.4 191 51.8
MCO12G360 Micromonas commoda HOM05D003634 ORTHO05D004146 8.8e-47 191.4 191 49.2
Psat5g189160 Pisum sativum HOM05D003634 ORTHO05D004146 8.8e-47 191.4 191 51.8
Hund04362 Selenicereus undatus HOM05D003634 ORTHO05D004146 8.8e-47 191.4 191 51.3
CSS0028528 Camellia sinensis var. sinensis HOM05D003634 ORTHO05D004146 1.1e-46 191.0 191 52.9
CsaV3_4G007520 Cucumis sativus L. HOM05D003634 ORTHO05D004146 1.1e-46 191.0 191 49.7
FAN02G0185 Fragaria x ananassa HOM05D003634 ORTHO05D004146 1.1e-46 191.0 191 52.4
Lj6g0020294 Lotus japonicus HOM05D003634 ORTHO05D004146 1.1e-46 191.0 191 51.3
arahy.Tifrunner.gnm1.ann1.MMUF9T Arachis hypogaea HOM05D003634 ORTHO05D004146 1.5e-46 190.7 191 50.8
FAN14G5409 Fragaria x ananassa HOM05D003634 ORTHO05D004146 1.5e-46 190.7 191 51.8
Psat2g018280 Pisum sativum HOM05D003634 ORTHO05D004146 1.5e-46 190.7 191 50.8
arahy.Tifrunner.gnm1.ann1.30A6BG Arachis hypogaea HOM05D003634 ORTHO05D004146 2.0e-46 190.3 191 51.3
Cfa023023 Carpinus fangiana HOM05D003634 ORTHO05D004146 2.0e-46 190.3 191 51.8
FvH4_6g38900 Fragaria vesca HOM05D003634 ORTHO05D004146 2.0e-46 190.3 191 51.8
Glyma.08G304200 Glycine max HOM05D003634 ORTHO05D004146 2.0e-46 190.3 191 51.3
Glyma.18G114900 Glycine max HOM05D003634 ORTHO05D004146 2.0e-46 190.3 191 51.3
CDE04G2981 Ceratophyllum demersum HOM05D003634 ORTHO05D004146 2.6e-46 189.9 192 50.0
Gohir.A05G380700 Gossypium hirsutum HOM05D003634 ORTHO05D004146 2.6e-46 189.9 191 50.3
Pp3c7_12850 Physcomitrium patens HOM05D003634 ORTHO05D004146 2.6e-46 189.9 192 51.0
AUR62003524 Chenopodium quinoa HOM05D003634 ORTHO05D004146 3.3e-46 189.5 191 50.8
Gohir.D04G034900 Gossypium hirsutum HOM05D003634 ORTHO05D004146 3.3e-46 189.5 191 50.8
Gorai.012G039400 Gossypium raimondii HOM05D003634 ORTHO05D004146 3.3e-46 189.5 191 50.8
Lj1A651T46 Lonicera japonica HOM05D003634 ORTHO05D004146 3.3e-46 189.5 191 51.3
MBI18_g28201_MAGBIO Magnolia biondii HOM05D003634 ORTHO05D004146 3.3e-46 189.5 191 52.4
MD09G1146300 Malus domestica HOM05D003634 ORTHO05D004146 3.3e-46 189.5 191 52.4
AUR62017838 Chenopodium quinoa HOM05D003634 ORTHO05D004146 4.4e-46 189.1 191 50.8
CANSAT64G2967 Cannabis sativa HOM05D003634 ORTHO05D004146 5.7e-46 188.7 191 50.3
CAN.G212.2 Capsicum annuum HOM05D003634 ORTHO05D004146 5.7e-46 188.7 191 50.3
FAN09G2615 Fragaria x ananassa HOM05D003634 ORTHO05D004146 5.7e-46 188.7 191 51.8
Hma1.2p1_0571F.1_g180910 Hydrangea macrophylla HOM05D003634 ORTHO05D004146 5.7e-46 188.7 191 51.8
SEGI_24342 Sequoiadendron giganteum HOM05D003634 ORTHO05D004146 5.7e-46 188.7 191 52.9
FAN05G3719 Fragaria x ananassa HOM05D003634 ORTHO05D004146 7.4e-46 188.3 191 51.3
Os07g0141400 Oryza sativa ssp. japonica HOM05D003634 ORTHO05D004146 7.4e-46 188.3 256 43.8
CAN.G488.26 Capsicum annuum HOM05D003634 ORTHO05D004146 9.7e-46 188.0 191 50.8
Rhsim12G0013500 Rhododendron simsii HOM05D003634 ORTHO05D004146 9.7e-46 188.0 191 51.8
Migut.H01272 Erythranthe guttata HOM05D003634 ORTHO05D004146 1.3e-45 187.6 191 50.3
Mapoly0058s0006 Marchantia polymorpha HOM05D003634 ORTHO05D004146 1.3e-45 187.6 193 51.8
PGR142G4178 Punica granatum HOM05D003634 ORTHO05D004146 1.3e-45 187.6 191 49.7
Solyc07g044860.3 Solanum lycopersicum HOM05D003634 ORTHO05D004146 1.3e-45 187.6 191 50.3
Sopen07g023420 Solanum pennellii HOM05D003634 ORTHO05D004146 1.3e-45 187.6 191 50.3
Zm00001eb117670 Zea mays HOM05D003634 ORTHO05D004146 1.3e-45 187.6 191 51.8
Mapoly0094s0007 Marchantia polymorpha HOM05D003634 ORTHO05D004146 1.7e-45 187.2 191 50.8
MD17G1132900 Malus domestica HOM05D003634 ORTHO05D004146 2.2e-45 186.8 191 51.8
Peaxi162Scf00359g01218 Petunia axillaris HOM05D003634 ORTHO05D004146 2.2e-45 186.8 191 50.3
arahy.Tifrunner.gnm1.ann1.1944SK Arachis hypogaea HOM05D003634 ORTHO05D004146 2.8e-45 186.4 188 50.0
BcaC07g36796 Brassica carinata HOM05D003634 ORTHO05D004146 2.8e-45 186.4 175 53.1
Gohir.D10G114500 Gossypium hirsutum HOM05D003634 ORTHO05D004146 2.8e-45 186.4 191 51.3
Gorai.011G126200 Gossypium raimondii HOM05D003634 ORTHO05D004146 2.8e-45 186.4 191 51.3
GSVIVG01020818001 Vitis vinifera HOM05D003634 ORTHO05D004146 2.8e-45 186.4 214 46.7
Potri.002G055700 Populus trichocarpa HOM05D003634 ORTHO05D004146 3.7e-45 186.0 191 50.8
Sabra05G0157200 Salix brachista HOM05D003634 ORTHO05D004146 3.7e-45 186.0 191 51.3
Lsat_1_v5_gn_3_35220 Lactuca sativa HOM05D003634 ORTHO05D004146 4.8e-45 185.7 211 46.4
Lj8C98T13 Lonicera japonica HOM05D003634 ORTHO05D004146 4.8e-45 185.7 191 50.8
Nitab4.5_0005601g0020 Nicotiana tabacum HOM05D003634 ORTHO05D004146 4.8e-45 185.7 199 50.3
Oeu012357.1 Olea europaea HOM05D003634 ORTHO05D004146 4.8e-45 185.7 191 50.8
Pp3c11_12080 Physcomitrium patens HOM05D003634 ORTHO05D004146 6.3e-45 185.3 191 49.2
Potri.005G206700 Populus trichocarpa HOM05D003634 ORTHO05D004146 6.3e-45 185.3 191 50.8
LjContig00049g0021127 Lotus japonicus HOM05D003634 ORTHO05D004146 8.2e-45 184.9 191 49.7
SalBow7G4383 Salvia bowleyana HOM05D003634 ORTHO05D004146 8.2e-45 184.9 192 50.0
Sed0027030 Sechium edule HOM05D003634 ORTHO05D004146 8.2e-45 184.9 191 49.2
unitig_8.g4601 Utricularia gibba HOM05D003634 ORTHO05D004146 8.2e-45 184.9 191 51.3
Sed0008663 Sechium edule HOM05D003634 ORTHO05D004146 1.1e-44 184.5 191 49.7
TWI23G0402 Tripterygium wilfordii HOM05D003634 ORTHO05D004146 1.1e-44 184.5 191 50.8
arahy.Tifrunner.gnm1.ann1.TCR54Y Arachis hypogaea HOM05D003634 ORTHO05D004146 1.4e-44 184.1 186 50.5
Manes.01G131300 Manihot esculenta HOM05D003634 ORTHO05D004146 1.4e-44 184.1 191 49.7
TPR.G14744 Trifolium pratense HOM05D003634 ORTHO05D004146 1.4e-44 184.1 185 51.9
Gohir.A10G151800 Gossypium hirsutum HOM05D003634 ORTHO05D004146 1.8e-44 183.7 272 41.9
Lalb_Chr10g0106481 Lupinus albus HOM05D003634 ORTHO05D004146 1.8e-44 183.7 191 50.8
Zm00001eb299760 Zea mays HOM05D003634 ORTHO05D004146 1.8e-44 183.7 262 45.0
Lalb_Chr04g0249011 Lupinus albus HOM05D003634 ORTHO05D004146 2.4e-44 183.3 191 51.3
Nitab4.5_0006644g0080 Nicotiana tabacum HOM05D003634 ORTHO05D004146 2.4e-44 183.3 199 49.2
Lalb_Chr17g0348121 Lupinus albus HOM05D003634 ORTHO05D004146 3.1e-44 183.0 191 50.3
Manes.02G089900 Manihot esculenta HOM05D003634 ORTHO05D004146 3.1e-44 183.0 191 49.2
QL08p045530 Quercus lobata HOM05D003634 ORTHO05D004146 3.1e-44 183.0 190 48.9
Atru.chr6.2016 Acer truncatum HOM05D003634 ORTHO05D004146 5.3e-44 182.2 192 51.0
ATR0681G398 Amborella trichopoda HOM05D003634 ORTHO05D004146 5.3e-44 182.2 183 53.0
Cc05_g00840 Coffea canephora HOM05D003634 ORTHO05D004146 5.3e-44 182.2 191 49.2
COL.COLO4_29888 Corchorus olitorius HOM05D003634 ORTHO05D004146 5.3e-44 182.2 191 49.2
Ciclev10032502m.g Citrus clementina HOM05D003634 ORTHO05D004146 7.0e-44 181.8 191 50.8
CiPaw.04G137000 Carya illinoinensis HOM05D003634 ORTHO05D004146 9.1e-44 181.4 191 50.3
Glyma.02G282500 Glycine max HOM05D003634 ORTHO05D004146 1.2e-43 181.0 191 48.7
Glyma.14G031800 Glycine max HOM05D003634 ORTHO05D004146 1.2e-43 181.0 191 48.7
Duzib264G1267 Durio zibethinus HOM05D003634 ORTHO05D004146 1.5e-43 180.6 191 49.7
arahy.Tifrunner.gnm1.ann1.0DED4Z Arachis hypogaea HOM05D003634 ORTHO05D004146 2.0e-43 180.3 192 49.0
Thecc.01G166600 Theobroma cacao HOM05D003634 ORTHO05D004146 2.0e-43 180.3 191 50.8
Migut.M00114 Erythranthe guttata HOM05D003634 ORTHO05D004146 2.6e-43 179.9 185 50.3
Mapoly0058s0007 Marchantia polymorpha HOM05D003634 ORTHO05D004146 3.5e-43 179.5 192 47.9
SGA_v2.0_scaffold49G18386 Striga asiatica HOM05D003634 ORTHO05D004146 3.5e-43 179.5 203 47.3
TWI14G0595 Tripterygium wilfordii HOM05D003634 ORTHO05D004146 7.7e-43 178.3 191 48.7
unitig_52.g17321 Utricularia gibba HOM05D003634 ORTHO05D004146 7.7e-43 178.3 191 48.7
MSTRG.14106 Avicennia marina HOM05D003634 ORTHO05D004146 1.3e-42 177.6 191 47.1
Sabra02G0045200 Salix brachista HOM05D003634 ORTHO05D004146 1.3e-42 177.6 191 48.2
MSTRG.12265 Avicennia marina HOM05D003634 ORTHO05D004146 1.7e-42 177.2 192 46.4
SMO276G0004 Selaginella moellendorffii HOM05D003634 ORTHO05D004146 2.9e-42 176.4 191 48.7
PGSC0003DMG400000926 Solanum tuberosum HOM05D003634 ORTHO05D004146 1.1e-41 174.5 211 45.5
Actinidia12527 Actinidia chinensis HOM05D003634 ORTHO05D004146 2.1e-40 170.2 192 49.0
PGR042G1985 Punica granatum HOM05D003634 ORTHO05D004146 2.1e-40 170.2 191 48.2
CBR_g259 Chara braunii HOM05D003634 ORTHO05D004146 2.3e-39 166.8 197 44.2
Haze_13608 Corylus avellana HOM05D003634 ORTHO05D004146 5.2e-39 165.6 191 47.1
Nitab4.5_0008321g0040 Nicotiana tabacum HOM05D003634 ORTHO05D004146 6.7e-39 165.2 191 48.2
VMungo0647G2531 Vigna mungo HOM05D003634 ORTHO05D004146 5.7e-38 162.2 171 49.1
HPP92_015688 Vanilla planifolia HOM05D003634 ORTHO05D004146 2.8e-37 159.8 195 44.6
Pp3c11_11560 Physcomitrium patens HOM05D003634 ORTHO05D004146 1.6e-35 154.1 186 43.0
Actinidia07504 Actinidia chinensis HOM05D003634 ORTHO05D004146 1.3e-34 151.0 188 47.3
AT2G30790 Arabidopsis thaliana HOM05D003634 ORTHO05D004146 4.4e-30 136.0 126 54.8
Oeu056845.1 Olea europaea HOM05D003634 ORTHO05D004146 1.7e-18 97.4 104 50.0
Actinidia12528 Actinidia chinensis HOM05D003634 ORTHO05D004146 1.9e-17 94.0 105 46.7
Nn7g37873 Nelumbo nucifera HOM05D003634 ORTHO05D004146 9.5e-17 91.7 108 46.3
PRCOL_00002970 Prasinoderma coloniale HOM05D003634 ORTHO05D004146 2.8e-16 90.1 171 36.8
Dinv20234 Davidia involucrata HOM05D003634 ORTHO05D004146 4.7e-16 89.4 83 55.4
Pp3c11_14700 Physcomitrium patens HOM05D003634 ORTHO05D004146 6.8e-15 85.5 85 51.8
PGSC0003DMG400031395 Solanum tuberosum HOM05D003634 ORTHO05D004146 5.7e-14 82.4 95 47.4
AagrBONN_evm.TU.Sc2ySwM_228.465 Anthoceros agrestis HOM05D003634 ORTHO05D004146 1.6e-11 74.3 89 46.1
Sp4g13290 Schrenkiella parvula HOM05D003634 ORTHO05D004146 7.8e-11 72.0 54 61.1
unitig_578.g16007 Utricularia gibba HOM05D003634 ORTHO05D004146 1.5e-09 67.8 69 53.6


User provided reference genes

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